Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0970 |
Symbol | |
ID | 6461524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1009452 |
End bp | 1010195 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727223 |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_002017873 |
Protein GI | 194336079 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.952557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATT TCAATATACT CGACAAGCTG AAACAAAGGC TTGACTCCTA CCGGCCGCTG CCGCCGGAGA TTGTTGCCAA TCTTCACGAA GATCTTGTTC TGCGCTGGAC GTACAACTCG AATGCTATCG AAGGCAATAC CCTGACGCTC AAGGAGACGA AAGTTGCCCT TGAGGGAATA ACGGTTGGTG GTAAAACCAT CCGGGAGCAT TTCGAGGCGA TCAATCACCG GGAAGCCATC TATTATGTTG AAGCGATGGT TCAACCGCAT GAGCCGCTCA CGGAATGGAA GATCAAGTCG ATCCATCAGT TGATCCTGAA GAATATCGAT GATGCTCATG CTGGTGTGTA CCGGAAAACC AATGTGATCA TTGCCGGTGC CGATCACGTC CCGCCAGACG CCCTGCATGT TGAAAGCGAA ATGCAAGGGT TCATCAACTG GTACAAAGAA CAAGCGCCTT CGCTTCATCC AGTTGAACGA GCGGCAAGGG TTCATGCCGA TTTTGTAAAA ATCCATCCCT TCACTGATGG CAATGGCCGA ACATCTCGCC TCTTGATGAA CCTTGAGCTG ATGAAGGACG GGTATCCGCC AGTGGTTCTT CCGGTAGAAA AGCGACTGGA GTACTACGAG GCTCTGGATG CCGCCCATAC GAAGCAGGAT TACGAGCCAT TTCTGGCTCT GATCGCCGAG GTTGTCGAGG CAGGATTCAA ACCATACTGG CACGCTTTGG GAGTACATCA ATGA
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Protein sequence | MPDFNILDKL KQRLDSYRPL PPEIVANLHE DLVLRWTYNS NAIEGNTLTL KETKVALEGI TVGGKTIREH FEAINHREAI YYVEAMVQPH EPLTEWKIKS IHQLILKNID DAHAGVYRKT NVIIAGADHV PPDALHVESE MQGFINWYKE QAPSLHPVER AARVHADFVK IHPFTDGNGR TSRLLMNLEL MKDGYPPVVL PVEKRLEYYE ALDAAHTKQD YEPFLALIAE VVEAGFKPYW HALGVHQ
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