More than 300 homologs were found in PanDaTox collection
for query gene Ppha_0970 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  100 
 
 
247 aa  508  1e-143  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  90.24 
 
 
247 aa  459  9.999999999999999e-129  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  58.85 
 
 
248 aa  299  3e-80  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  59 
 
 
251 aa  293  2e-78  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  57.63 
 
 
245 aa  285  5.999999999999999e-76  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  54.73 
 
 
248 aa  276  2e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  49.17 
 
 
243 aa  236  2e-61  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  46.32 
 
 
267 aa  206  2e-52  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  45.02 
 
 
267 aa  199  1.9999999999999998e-50  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  43.03 
 
 
256 aa  186  3e-46  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1262  hypothetical protein  44 
 
 
249 aa  186  3e-46  Haemophilus somnus 129PT  Bacteria  normal  0.254788  n/a   
 
 
-
 
NC_007519  Dde_3441  hypothetical protein  43.48 
 
 
253 aa  186  4e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  47.69 
 
 
252 aa  186  4e-46  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  40.66 
 
 
317 aa  184  8e-46  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2915  hypothetical protein  43.04 
 
 
253 aa  183  2.0000000000000003e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_011898  Ccel_2696  filamentation induced by cAMP protein Fic  43.57 
 
 
253 aa  183  2.0000000000000003e-45  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  41.26 
 
 
328 aa  178  5.999999999999999e-44  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_009483  Gura_2737  filamentation induced by cAMP protein Fic  40.66 
 
 
251 aa  177  1e-43  Geobacter uraniireducens Rf4  Bacteria  normal  0.0264056  n/a   
 
 
-
 
NC_010001  Cphy_0273  filamentation induced by cAMP protein Fic  38.84 
 
 
306 aa  176  3e-43  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0086  filamentation induced by cAMP protein Fic  40.83 
 
 
304 aa  172  2.9999999999999996e-42  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1166  filamentation induced by cAMP protein Fic  39.92 
 
 
252 aa  168  7e-41  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0608775 
 
 
-
 
NC_008609  Ppro_2285  filamentation induced by cAMP protein Fic  44.17 
 
 
250 aa  167  1e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2836  filamentation induced by cAMP protein Fic  44.73 
 
 
250 aa  162  4.0000000000000004e-39  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1049  Fic family protein  38.4 
 
 
271 aa  144  1e-33  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000030649  normal 
 
 
-
 
NC_013204  Elen_0755  filamentation induced by cAMP protein Fic  39.17 
 
 
226 aa  129  5.0000000000000004e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.973476 
 
 
-
 
NC_010816  BLD_0340  hypothetical protein  33.17 
 
 
240 aa  107  2e-22  Bifidobacterium longum DJO10A  Bacteria  normal  0.0522117  n/a   
 
 
-
 
NC_009441  Fjoh_3445  helix-turn-helix domain-containing protein  28.03 
 
 
335 aa  104  2e-21  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1635  filamentation induced by cAMP protein Fic  32.49 
 
 
326 aa  94.7  1e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  33.51 
 
 
348 aa  94.7  1e-18  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  33.51 
 
 
348 aa  94.7  1e-18  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0207  filamentation induced by cAMP protein Fic  30.59 
 
 
299 aa  94  2e-18  Atopobium parvulum DSM 20469  Bacteria  normal  hitchhiker  0.00576684 
 
 
-
 
NC_013595  Sros_0601  hypothetical protein  32.1 
 
 
321 aa  92.8  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0452  fic family protein  29.38 
 
 
261 aa  89  6e-17  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2616  death-on-curing family protein  29.86 
 
 
261 aa  87  3e-16  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2288  hypothetical protein  40.17 
 
 
502 aa  85.5  7e-16  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_1818  filamentation induced by cAMP protein Fic  31.52 
 
 
345 aa  84.7  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.702991  normal 
 
 
-
 
NC_013162  Coch_0913  filamentation induced by cAMP protein Fic  31.5 
 
 
245 aa  84.7  0.000000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.876617  n/a   
 
 
-
 
NC_013162  Coch_0779  filamentation induced by cAMP protein Fic  32.67 
 
 
236 aa  85.1  0.000000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  28.7 
 
 
394 aa  84.3  0.000000000000002  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_009943  Dole_0828  filamentation induced by cAMP protein Fic  40.17 
 
 
509 aa  83.6  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  31.17 
 
 
380 aa  84  0.000000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  30.77 
 
 
380 aa  84.3  0.000000000000002  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_010814  Glov_0191  filamentation induced by cAMP protein Fic  38.76 
 
 
508 aa  83.6  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_10760  hypothetical protein  29.39 
 
 
303 aa  82.4  0.000000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.553511  normal 
 
 
-
 
NC_011138  MADE_00876  filamentation induced by cAMP protein Fic  38.35 
 
 
447 aa  81.6  0.00000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  32.12 
 
 
386 aa  80.1  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_007954  Sden_0838  filamentation induced by cAMP protein Fic  36.09 
 
 
505 aa  79.7  0.00000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1058  filamentation induced by cAMP protein Fic  34.48 
 
 
529 aa  79.3  0.00000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.620217 
 
 
-
 
NC_002978  WD1314  Fic family protein  30.66 
 
 
359 aa  79  0.00000000000006  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_009430  Rsph17025_4231  hypothetical protein  27.27 
 
 
364 aa  79  0.00000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.758484 
 
 
-
 
NC_002978  WD0346  Fic family protein  28.4 
 
 
360 aa  79  0.00000000000007  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.361104  n/a   
 
 
-
 
NC_008609  Ppro_0217  filamentation induced by cAMP protein Fic  42.11 
 
 
508 aa  79  0.00000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1106  filamentation induced by cAMP protein Fic  37.61 
 
 
533 aa  79  0.00000000000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3058  filamentation induced by cAMP protein Fic  35.34 
 
 
541 aa  78.6  0.00000000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  27.75 
 
 
380 aa  78.6  0.0000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1107  filamentation induced by cAMP protein Fic  27.36 
 
 
254 aa  77.8  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  27.75 
 
 
380 aa  78.6  0.0000000000001  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  27.75 
 
 
380 aa  78.6  0.0000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1178  filamentation induced by cAMP protein Fic  27.36 
 
 
254 aa  77.8  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1051  filamentation induced by cAMP protein Fic  27.36 
 
 
254 aa  77  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.843969  n/a   
 
 
-
 
NC_010814  Glov_0277  filamentation induced by cAMP protein Fic  38.6 
 
 
508 aa  76.6  0.0000000000003  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000636262  n/a   
 
 
-
 
NC_008740  Maqu_2657  filamentation induced by cAMP protein Fic  25.46 
 
 
233 aa  77  0.0000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3261  filamentation induced by cAMP protein Fic  32.57 
 
 
502 aa  76.3  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.464971  normal 
 
 
-
 
NC_012791  Vapar_1002  filamentation induced by cAMP protein Fic  39.83 
 
 
531 aa  75.5  0.0000000000008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  28.99 
 
 
333 aa  75.1  0.0000000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_002967  TDE2641  Fic family protein  26.45 
 
 
328 aa  75.1  0.000000000001  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000103829  n/a   
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  28.99 
 
 
333 aa  74.7  0.000000000001  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0838  Fic family protein  29.06 
 
 
236 aa  74.3  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0586885  n/a   
 
 
-
 
NC_007519  Dde_2494  hypothetical protein  30.58 
 
 
342 aa  73.6  0.000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0416  filamentation induced by cAMP protein Fic  31.1 
 
 
336 aa  73.6  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3924  filamentation induced by cAMP protein Fic  32.22 
 
 
391 aa  72.8  0.000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2669  Fic family protein  29.82 
 
 
330 aa  72.4  0.000000000007  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0096  filamentation induced by cAMP protein Fic  29.17 
 
 
349 aa  72  0.000000000009  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1856  Fis family transcriptional regulator  31.22 
 
 
328 aa  71.2  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0903  filamentation induced by cAMP protein Fic  29.46 
 
 
347 aa  71.6  0.00000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.000226959 
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  34.91 
 
 
431 aa  71.2  0.00000000002  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1091  hypothetical protein  32.73 
 
 
369 aa  70.5  0.00000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  34.91 
 
 
431 aa  71.2  0.00000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_28800  hypothetical protein  28.97 
 
 
331 aa  70.1  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000287413  decreased coverage  0.000000000406133 
 
 
-
 
NC_008554  Sfum_3863  filamentation induced by cAMP protein Fic  30.54 
 
 
334 aa  70.1  0.00000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0343511 
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  26.64 
 
 
358 aa  70.1  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_009426  Saro_3922  filamentation induced by cAMP protein Fic  31.25 
 
 
379 aa  70.1  0.00000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.393872  n/a   
 
 
-
 
NC_013204  Elen_1397  filamentation induced by cAMP protein Fic  25.88 
 
 
316 aa  68.9  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.93843  normal 
 
 
-
 
NC_013173  Dbac_2308  filamentation induced by cAMP protein Fic  27.8 
 
 
349 aa  68.6  0.00000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1819  filamentation induced by cAMP protein Fic  24.45 
 
 
245 aa  68.6  0.00000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0373  filamentation induced by cAMP protein Fic  29.3 
 
 
371 aa  68.6  0.00000000009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.5223  n/a   
 
 
-
 
NC_009483  Gura_1281  filamentation induced by cAMP protein Fic  29.41 
 
 
349 aa  68.6  0.00000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0182  Fic family protein  32.66 
 
 
352 aa  68.2  0.0000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0509  filamentation induced by cAMP protein Fic  29.2 
 
 
387 aa  68.2  0.0000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  30.29 
 
 
380 aa  67.4  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0831  AsnC family regulatory protein  29.86 
 
 
349 aa  67.8  0.0000000002  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00000000889639  n/a   
 
 
-
 
NC_009523  RoseRS_0276  filamentation induced by cAMP protein Fic  29.18 
 
 
387 aa  67  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.475066  unclonable  0.0000132219 
 
 
-
 
NC_007778  RPB_2127  filamentation induced by cAMP protein Fic  27.11 
 
 
367 aa  67.4  0.0000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.296141  normal 
 
 
-
 
NC_013946  Mrub_0444  filamentation induced by cAMP protein Fic  29.55 
 
 
365 aa  67.4  0.0000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.401408 
 
 
-
 
NC_010501  PputW619_4356  filamentation induced by cAMP protein Fic  31.21 
 
 
443 aa  67.4  0.0000000002  Pseudomonas putida W619  Bacteria  normal  0.871364  normal  0.139855 
 
 
-
 
NC_009675  Anae109_1101  filamentation induced by cAMP protein Fic  26.2 
 
 
254 aa  67.4  0.0000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.946111  normal 
 
 
-
 
NC_002939  GSU0168  Fic family protein  31.16 
 
 
388 aa  67  0.0000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  29.47 
 
 
386 aa  66.6  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
NC_007964  Nham_2833  filamentation induced by cAMP protein Fic  33.33 
 
 
512 aa  66.6  0.0000000003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1972  filamentation induced by cAMP protein Fic  27.23 
 
 
349 aa  67  0.0000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.335925  n/a   
 
 
-
 
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