56 homologs were found in PanDaTox collection
for query gene Dole_1461 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1461  carbon-monoxide dehydrogenase, catalytic subunit  100 
 
 
656 aa  1359    Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.0000000668721  n/a   
 
 
-
 
NC_008554  Sfum_2566  carbon-monoxide dehydrogenase, catalytic subunit  71.12 
 
 
663 aa  981    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0335  carbon-monoxide dehydrogenase, catalytic subunit  52.57 
 
 
642 aa  671    Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_3185  carbon-monoxide dehydrogenase, catalytic subunit  54.24 
 
 
679 aa  717    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.579976  n/a   
 
 
-
 
NC_010424  Daud_0870  carbon-monoxide dehydrogenase, catalytic subunit  49.28 
 
 
628 aa  608  9.999999999999999e-173  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.404437  n/a   
 
 
-
 
NC_013216  Dtox_2327  carbon-monoxide dehydrogenase, catalytic subunit  47.53 
 
 
621 aa  569  1e-161  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00453727  normal  0.0261188 
 
 
-
 
NC_007355  Mbar_A3525  carbon monoxide dehydrogenase  46.62 
 
 
624 aa  560  1e-158  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1272  carbon-monoxide dehydrogenase, catalytic subunit  47.18 
 
 
628 aa  552  1e-156  Methanospirillum hungatei JF-1  Archaea  normal  0.142133  normal 
 
 
-
 
NC_008554  Sfum_2875  carbon-monoxide dehydrogenase, catalytic subunit  45.69 
 
 
626 aa  542  1e-153  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.843098  normal 
 
 
-
 
NC_011832  Mpal_0842  carbon-monoxide dehydrogenase, catalytic subunit  45.38 
 
 
629 aa  540  9.999999999999999e-153  Methanosphaerula palustris E1-9c  Archaea  normal  0.183197  normal  0.106762 
 
 
-
 
NC_013223  Dret_1234  carbon-monoxide dehydrogenase, catalytic subunit  44.23 
 
 
629 aa  539  9.999999999999999e-153  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0405701  normal  0.377093 
 
 
-
 
NC_008553  Mthe_1341  carbon-monoxide dehydrogenase, catalytic subunit  46.66 
 
 
623 aa  537  1e-151  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_0884  carbon-monoxide dehydrogenase, catalytic subunit  45.75 
 
 
653 aa  517  1.0000000000000001e-145  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.17634  normal  0.977834 
 
 
-
 
NC_013173  Dbac_0934  carbon-monoxide dehydrogenase, catalytic subunit  42.68 
 
 
627 aa  516  1.0000000000000001e-145  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.502316  n/a   
 
 
-
 
NC_007519  Dde_3028  carbon-monoxide dehydrogenase, catalytic subunit  43.5 
 
 
625 aa  515  1e-144  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0382  carbon-monoxide dehydrogenase, catalytic subunit  43.29 
 
 
631 aa  512  1e-144  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.72739  n/a   
 
 
-
 
NC_011769  DvMF_2233  carbon-monoxide dehydrogenase, catalytic subunit  44.3 
 
 
629 aa  508  9.999999999999999e-143  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1133  carbon-monoxide dehydrogenase, catalytic subunit  42.97 
 
 
629 aa  494  9.999999999999999e-139  Desulfovibrio vulgaris DP4  Bacteria  normal  0.394682  normal  0.139391 
 
 
-
 
NC_007498  Pcar_0057  carbon-monoxide dehydrogenase, catalytic subunit  43.93 
 
 
645 aa  489  1e-137  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.612526  n/a   
 
 
-
 
NC_002939  GSU2098  carbon monoxide dehydrogenase subunit  42.24 
 
 
640 aa  472  1.0000000000000001e-131  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0618  carbon-monoxide dehydrogenase, catalytic subunit  41.76 
 
 
641 aa  471  1.0000000000000001e-131  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0882  carbon-monoxide dehydrogenase, catalytic subunit  41.98 
 
 
635 aa  456  1e-127  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4498  carbon-monoxide dehydrogenase, catalytic subunit  38.41 
 
 
663 aa  412  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.325797 
 
 
-
 
NC_007644  Moth_1203  carbon-monoxide dehydrogenase, catalytic subunit  38.49 
 
 
674 aa  407  1.0000000000000001e-112  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1427  carbon-monoxide dehydrogenase, catalytic subunit  37.78 
 
 
639 aa  399  9.999999999999999e-111  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3792  carbon-monoxide dehydrogenase, catalytic subunit  37.77 
 
 
635 aa  397  1e-109  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.117932  n/a   
 
 
-
 
NC_012560  Avin_04490  carbon-monoxide dehydrogenase, catalytic subunit  39.4 
 
 
632 aa  393  1e-108  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0072  carbon-monoxide dehydrogenase, catalytic subunit  38.32 
 
 
635 aa  388  1e-106  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1270  carbon-monoxide dehydrogenase, catalytic subunit  37.89 
 
 
673 aa  387  1e-106  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00748773  normal 
 
 
-
 
NC_007644  Moth_1972  carbon-monoxide dehydrogenase, catalytic subunit  36.63 
 
 
655 aa  366  1e-100  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00000154748  normal 
 
 
-
 
NC_011830  Dhaf_2798  carbon-monoxide dehydrogenase, catalytic subunit  36.78 
 
 
672 aa  368  1e-100  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3780  carbon-monoxide dehydrogenase, catalytic subunit  36.84 
 
 
674 aa  357  3.9999999999999996e-97  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.288316  normal 
 
 
-
 
NC_011146  Gbem_1736  carbon-monoxide dehydrogenase, catalytic subunit  34.63 
 
 
666 aa  353  7e-96  Geobacter bemidjiensis Bem  Bacteria  normal  0.306274  n/a   
 
 
-
 
NC_007517  Gmet_1902  carbon-monoxide dehydrogenase, catalytic subunit  34.86 
 
 
669 aa  345  2e-93  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000268472  hitchhiker  0.000000000000110792 
 
 
-
 
NC_009012  Cthe_2801  carbon-monoxide dehydrogenase, catalytic subunit  35.26 
 
 
670 aa  326  7e-88  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000137875  n/a   
 
 
-
 
NC_009715  CCV52592_1131  carbon-monoxide dehydrogenase, catalytic subunit  33.23 
 
 
676 aa  313  7.999999999999999e-84  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000338326  n/a   
 
 
-
 
NC_011898  Ccel_0438  carbon-monoxide dehydrogenase, catalytic subunit  32.38 
 
 
663 aa  308  3e-82  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000530778  n/a   
 
 
-
 
NC_009802  CCC13826_0236  carbon-monoxide dehydrogenase, catalytic subunit  32.54 
 
 
679 aa  303  6.000000000000001e-81  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1166  carbon-monoxide dehydrogenase, catalytic subunit  31.86 
 
 
637 aa  297  5e-79  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3717  carbon-monoxide dehydrogenase, catalytic subunit  33.03 
 
 
634 aa  290  5.0000000000000004e-77  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013216  Dtox_2933  carbon-monoxide dehydrogenase, catalytic subunit  31.58 
 
 
623 aa  290  6e-77  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000257353  normal 
 
 
-
 
NC_008553  Mthe_1216  carbon-monoxide dehydrogenase, catalytic subunit  31.11 
 
 
648 aa  283  7.000000000000001e-75  Methanosaeta thermophila PT  Archaea  normal  0.655192  n/a   
 
 
-
 
NC_008639  Cpha266_0149  carbon-monoxide dehydrogenase (acceptor)  31.97 
 
 
680 aa  280  6e-74  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0860  carbon-monoxide dehydrogenase, catalytic subunit  31.92 
 
 
695 aa  279  1e-73  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.199727  normal  0.922779 
 
 
-
 
NC_007498  Pcar_0888  carbon-monoxide dehydrogenase, catalytic subunit  31.14 
 
 
629 aa  276  1.0000000000000001e-72  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.186953  n/a   
 
 
-
 
NC_011898  Ccel_2918  carbon-monoxide dehydrogenase, catalytic subunit  31.16 
 
 
710 aa  264  4e-69  Clostridium cellulolyticum H10  Bacteria  normal  0.0596914  n/a   
 
 
-
 
NC_009253  Dred_0652  carbon-monoxide dehydrogenase, catalytic subunit  30.94 
 
 
707 aa  254  4.0000000000000004e-66  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00052858  n/a   
 
 
-
 
NC_007955  Mbur_0858  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.24 
 
 
802 aa  56.2  0.000002  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.00000000764937  n/a   
 
 
-
 
NC_007355  Mbar_A0434  acetyl-CoA decarbonylase/synthase complex subunit alpha  22.8 
 
 
806 aa  54.7  0.000005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_0292  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.92 
 
 
805 aa  53.1  0.00002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0204  acetyl-CoA decarbonylase/synthase complex subunit alpha  24.7 
 
 
806 aa  50.1  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00731411  normal 
 
 
-
 
NC_009635  Maeo_0475  acetyl-CoA decarbonylase/synthase complex subunit alpha  19.71 
 
 
768 aa  47  0.001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.908557  n/a   
 
 
-
 
NC_008262  CPR_2587  hydroxylamine reductase  22.22 
 
 
547 aa  44.3  0.007  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000431874  n/a   
 
 
-
 
NC_008261  CPF_2909  hydroxylamine reductase  22.22 
 
 
547 aa  44.3  0.007  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1577  hydroxylamine reductase  22.71 
 
 
431 aa  44.3  0.008  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1666  hydroxylamine reductase  24.07 
 
 
565 aa  43.9  0.009  Serratia proteamaculans 568  Bacteria  normal  0.372025  normal  0.875893 
 
 
-
 
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