58 homologs were found in PanDaTox collection
for query gene Dtox_3780 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013216  Dtox_3780  carbon-monoxide dehydrogenase, catalytic subunit  100 
 
 
674 aa  1397    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.288316  normal 
 
 
-
 
NC_013216  Dtox_1270  carbon-monoxide dehydrogenase, catalytic subunit  77.3 
 
 
673 aa  1103    Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00748773  normal 
 
 
-
 
NC_011830  Dhaf_2798  carbon-monoxide dehydrogenase, catalytic subunit  52.44 
 
 
672 aa  775    Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1203  carbon-monoxide dehydrogenase, catalytic subunit  65.24 
 
 
674 aa  931    Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3792  carbon-monoxide dehydrogenase, catalytic subunit  43.15 
 
 
635 aa  576  1.0000000000000001e-163  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.117932  n/a   
 
 
-
 
NC_007925  RPC_4498  carbon-monoxide dehydrogenase, catalytic subunit  45.01 
 
 
663 aa  569  1e-161  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.325797 
 
 
-
 
NC_011146  Gbem_0072  carbon-monoxide dehydrogenase, catalytic subunit  44.15 
 
 
635 aa  551  1e-155  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0882  carbon-monoxide dehydrogenase, catalytic subunit  43.51 
 
 
635 aa  530  1e-149  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1427  carbon-monoxide dehydrogenase, catalytic subunit  42.54 
 
 
639 aa  524  1e-147  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2327  carbon-monoxide dehydrogenase, catalytic subunit  42.86 
 
 
621 aa  486  1e-136  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00453727  normal  0.0261188 
 
 
-
 
NC_008553  Mthe_1341  carbon-monoxide dehydrogenase, catalytic subunit  42.12 
 
 
623 aa  464  1e-129  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3525  carbon monoxide dehydrogenase  42.18 
 
 
624 aa  464  1e-129  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_002939  GSU2098  carbon monoxide dehydrogenase subunit  41.82 
 
 
640 aa  464  1e-129  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0842  carbon-monoxide dehydrogenase, catalytic subunit  41.21 
 
 
629 aa  457  1e-127  Methanosphaerula palustris E1-9c  Archaea  normal  0.183197  normal  0.106762 
 
 
-
 
NC_009483  Gura_0618  carbon-monoxide dehydrogenase, catalytic subunit  41.85 
 
 
641 aa  459  1e-127  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0057  carbon-monoxide dehydrogenase, catalytic subunit  41.05 
 
 
645 aa  453  1.0000000000000001e-126  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.612526  n/a   
 
 
-
 
NC_009943  Dole_3185  carbon-monoxide dehydrogenase, catalytic subunit  40.88 
 
 
679 aa  452  1e-125  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.579976  n/a   
 
 
-
 
NC_011769  DvMF_2233  carbon-monoxide dehydrogenase, catalytic subunit  40.07 
 
 
629 aa  437  1e-121  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_04490  carbon-monoxide dehydrogenase, catalytic subunit  39.04 
 
 
632 aa  438  1e-121  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1272  carbon-monoxide dehydrogenase, catalytic subunit  40.39 
 
 
628 aa  437  1e-121  Methanospirillum hungatei JF-1  Archaea  normal  0.142133  normal 
 
 
-
 
NC_011883  Ddes_0382  carbon-monoxide dehydrogenase, catalytic subunit  40.26 
 
 
631 aa  434  1e-120  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.72739  n/a   
 
 
-
 
NC_008554  Sfum_2875  carbon-monoxide dehydrogenase, catalytic subunit  38.58 
 
 
626 aa  431  1e-119  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.843098  normal 
 
 
-
 
NC_013223  Dret_1234  carbon-monoxide dehydrogenase, catalytic subunit  38.57 
 
 
629 aa  431  1e-119  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0405701  normal  0.377093 
 
 
-
 
NC_013173  Dbac_0934  carbon-monoxide dehydrogenase, catalytic subunit  39.17 
 
 
627 aa  426  1e-118  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.502316  n/a   
 
 
-
 
NC_007519  Dde_3028  carbon-monoxide dehydrogenase, catalytic subunit  38.82 
 
 
625 aa  428  1e-118  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1133  carbon-monoxide dehydrogenase, catalytic subunit  38.37 
 
 
629 aa  409  1e-113  Desulfovibrio vulgaris DP4  Bacteria  normal  0.394682  normal  0.139391 
 
 
-
 
NC_009712  Mboo_0884  carbon-monoxide dehydrogenase, catalytic subunit  37.79 
 
 
653 aa  410  1e-113  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.17634  normal  0.977834 
 
 
-
 
NC_013385  Adeg_0335  carbon-monoxide dehydrogenase, catalytic subunit  39.44 
 
 
642 aa  403  1e-111  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1461  carbon-monoxide dehydrogenase, catalytic subunit  36.84 
 
 
656 aa  371  1e-101  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.0000000668721  n/a   
 
 
-
 
NC_008554  Sfum_2566  carbon-monoxide dehydrogenase, catalytic subunit  38.03 
 
 
663 aa  371  1e-101  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0870  carbon-monoxide dehydrogenase, catalytic subunit  37.1 
 
 
628 aa  372  1e-101  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.404437  n/a   
 
 
-
 
NC_007644  Moth_1972  carbon-monoxide dehydrogenase, catalytic subunit  33.33 
 
 
655 aa  328  2.0000000000000001e-88  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00000154748  normal 
 
 
-
 
NC_009802  CCC13826_0236  carbon-monoxide dehydrogenase, catalytic subunit  31.15 
 
 
679 aa  318  2e-85  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1736  carbon-monoxide dehydrogenase, catalytic subunit  30.77 
 
 
666 aa  315  1.9999999999999998e-84  Geobacter bemidjiensis Bem  Bacteria  normal  0.306274  n/a   
 
 
-
 
NC_009715  CCV52592_1131  carbon-monoxide dehydrogenase, catalytic subunit  31.95 
 
 
676 aa  312  1e-83  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000338326  n/a   
 
 
-
 
NC_010718  Nther_0860  carbon-monoxide dehydrogenase, catalytic subunit  31.17 
 
 
695 aa  312  1e-83  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.199727  normal  0.922779 
 
 
-
 
NC_009012  Cthe_2801  carbon-monoxide dehydrogenase, catalytic subunit  32.15 
 
 
670 aa  311  2e-83  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000137875  n/a   
 
 
-
 
NC_007517  Gmet_1902  carbon-monoxide dehydrogenase, catalytic subunit  32.18 
 
 
669 aa  306  8.000000000000001e-82  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000268472  hitchhiker  0.000000000000110792 
 
 
-
 
NC_011898  Ccel_0438  carbon-monoxide dehydrogenase, catalytic subunit  31.28 
 
 
663 aa  306  8.000000000000001e-82  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000530778  n/a   
 
 
-
 
NC_009253  Dred_0652  carbon-monoxide dehydrogenase, catalytic subunit  30.41 
 
 
707 aa  296  6e-79  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00052858  n/a   
 
 
-
 
NC_011898  Ccel_2918  carbon-monoxide dehydrogenase, catalytic subunit  30.45 
 
 
710 aa  294  5e-78  Clostridium cellulolyticum H10  Bacteria  normal  0.0596914  n/a   
 
 
-
 
NC_011830  Dhaf_1166  carbon-monoxide dehydrogenase, catalytic subunit  30.1 
 
 
637 aa  268  2.9999999999999995e-70  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2933  carbon-monoxide dehydrogenase, catalytic subunit  30.15 
 
 
623 aa  267  4e-70  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000257353  normal 
 
 
-
 
NC_007355  Mbar_A3717  carbon-monoxide dehydrogenase, catalytic subunit  29.37 
 
 
634 aa  249  1e-64  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007498  Pcar_0888  carbon-monoxide dehydrogenase, catalytic subunit  28.66 
 
 
629 aa  230  6e-59  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.186953  n/a   
 
 
-
 
NC_008639  Cpha266_0149  carbon-monoxide dehydrogenase (acceptor)  29.09 
 
 
680 aa  225  2e-57  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1216  carbon-monoxide dehydrogenase, catalytic subunit  27.33 
 
 
648 aa  219  1e-55  Methanosaeta thermophila PT  Archaea  normal  0.655192  n/a   
 
 
-
 
NC_007955  Mbur_0858  acetyl-CoA decarbonylase/synthase complex subunit alpha  25.14 
 
 
802 aa  65.1  0.000000004  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.00000000764937  n/a   
 
 
-
 
NC_007796  Mhun_0690  acetyl-CoA decarbonylase/synthase complex subunit alpha  24.92 
 
 
787 aa  64.7  0.000000005  Methanospirillum hungatei JF-1  Archaea  normal  0.676741  normal  0.475894 
 
 
-
 
NC_010424  Daud_0105  acetyl-CoA decarbonylase/synthase complex subunit alpha  25 
 
 
766 aa  59.7  0.0000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0204  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.86 
 
 
806 aa  54.3  0.000007  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00731411  normal 
 
 
-
 
NC_008553  Mthe_0292  acetyl-CoA decarbonylase/synthase complex subunit alpha  20.24 
 
 
805 aa  54.3  0.000007  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0434  acetyl-CoA decarbonylase/synthase complex subunit alpha  20.87 
 
 
806 aa  54.3  0.000007  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_1673  acetyl-CoA decarbonylase/synthase complex subunit alpha  20.77 
 
 
778 aa  51.6  0.00004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0805  acetyl-CoA decarbonylase/synthase complex subunit alpha  20.77 
 
 
778 aa  51.6  0.00004  Methanococcus maripaludis C5  Archaea  normal  0.471946  n/a   
 
 
-
 
NC_009635  Maeo_0475  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.38 
 
 
768 aa  51.2  0.00006  Methanococcus aeolicus Nankai-3  Archaea  normal  0.908557  n/a   
 
 
-
 
NC_009635  Maeo_1174  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.36 
 
 
786 aa  48.9  0.0003  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0311  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.41 
 
 
779 aa  45.8  0.002  Methanococcus vannielii SB  Archaea  normal  0.435383  n/a   
 
 
-
 
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