Gene Mbar_A3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3525 
Symbol 
ID3625413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4520175 
End bp4522049 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content49% 
IMG OID637702351 
Productcarbon monoxide dehydrogenase 
Protein accessionYP_306974 
Protein GI73670959 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGG AAATATATGA GAAAAGTATT GACCTTGCAA GTCAGAAAAT GCTTCAGAAG 
GCCGAAAAAG AAGGCATTGA AACCGCCTGG GACAGGTATG AAAAACAACT GCCTCAATGC
AGTTTCGGGC AGCTAGGAGT TTGCTGCCGG AATTGTAATA TGGGTCCATG CAGGATAGAT
CCCTTCGGAG AGGGAGCTCA AAAGGGAATT TGCGGCGCTA CTGCAGACAT CATAGTTGCA
AGGAATTTCC TTAGAATGAT TGCCGCAGGT GCAGCAGCTC ATTCCGACCA TGCAAGAGAC
GCTGTTCTGA CCTTTAAGAA AATGAGTGAA GGAGAAGCTG GAAGTTACGG GATAAAAGAT
GAAGCAAAAC TGCTATCTCT TGCCTCGGAA TATGGGATTT CCTCAGAGGG CAAAAACCTG
GAGGAAGTCG CAGCCAAACT TGCTAACACA CTGCTTCAGG AATTTGGAAA ACAGGATGGA
CATCTCCAGT GTACCAGAAG AGTTCCGGAA TCAAGGCTCA AGCTCTGGGC CGAGCTTGGA
ATAGAGCCCA GGGGGATTGA CCGGGAAATC GTGGAATGCA TGCACAGGAC TCATATAGGT
GTGGACAATG ATGCGGTTCA TATCCTGCTG CAAGGACTGC GCACAGGGCT TTCCGATGGT
TGGGGAGGCT CGATGATAGC CACCGACGTC CAGGACATAC TCTTTGGAGT TCCACAGCCT
AGAAGAAGCA CCGTTAATCT GGGGGTGCTG TCCAGAGACA AAGTAAATGT AATTGTCCAC
GGGCACGAAC CTATTCTCTC AGAAATGATC GTGGAAGCTA CAGAAAACCC CGAGCTCCTT
AAACTTGCAG AGGAAAAGGG TGCAGCAGGC ATCAACGTTG TAGGAATATG CTGTACTGGT
AACGAGACCC TAATGCGTCA TGGGATTCCC ATAGCCGGAA ATTTCCTTCA GCAGGAGCTG
GCAGTAATTA CAGGCGCTGT GGAAGCTATG GTTGTTGATG TCCAGTGTAT CATGCCCTCG
CTTGGAGAAC TTACAGGCTG CTACCACACA AAGTTTATAT CTACATCTCC AAAGGCCGAT
TTTCCCAACA CCGTAAGAAT GGAATTCCAT GAGGACAGAG CTTATGAAAC CGCAACAGAA
ATCGTAAGGA CTGCCGTTGA AAACTTCCCT AACAGGGTTC CGGAAAAGGT TACCATACCT
GAAGAAAAGC AGGAGTGCAT GGCAGGCTTC AGTGCCGAGG CTATACTCAG TGCCCTTGGA
GGAAGCCCTG ATCCTCTCAT TGAGGCGATA AAAGGCGGGG CTGTTCGGGG AATAGGGGCT
GTTGTCGGCT GCAATAACAT AAAAGTAAAG CACAACTACG GCCATGTCAA CCTCGTTAAA
GAACTGATCG AAAACAATGT GCTTGTGGTC ACAACCGGCT GCAATGCAAT TGCATGTGCC
GAAGCAGGGC TTCTTCTGCC GGAAGCTTCC GAACTTGCAG GCGATGGTTT AAAAGCCGTC
TGTAAGGCTT TGGGCATACC CCCTGTTCTG CACATGGGTT CCTGTGTTGA TATCAGCCGT
ATCCTTGTGC TTTCAGCTGC GATTGCAAAC CGCCTGGGTG TGGACATAAG TGATCTTCCA
GCAGCAGGAG CAGCCCCTGA ATGGATGAGC GAAAAGGCGG TTAGCATCGG GGCTTATGTG
GTTTCATCCG GCGTATTTAC CGTGCTCGGG ACTATTCCGG CTGTTCTTGG AAGTCAGGCT
GTTACGTCCC TTCTGACAGG AGGTTTGAAC GACGTGGTCG GAGCAAGCTT TGCAGTTGAG
CCTGATCCCT TTAAAGCTGC AGACCTGATG CTTGAGCACA TTGACGAAAA AAGAAAGGCA
CTGGGCTTGA ACTAA
 
Protein sequence
MKTEIYEKSI DLASQKMLQK AEKEGIETAW DRYEKQLPQC SFGQLGVCCR NCNMGPCRID 
PFGEGAQKGI CGATADIIVA RNFLRMIAAG AAAHSDHARD AVLTFKKMSE GEAGSYGIKD
EAKLLSLASE YGISSEGKNL EEVAAKLANT LLQEFGKQDG HLQCTRRVPE SRLKLWAELG
IEPRGIDREI VECMHRTHIG VDNDAVHILL QGLRTGLSDG WGGSMIATDV QDILFGVPQP
RRSTVNLGVL SRDKVNVIVH GHEPILSEMI VEATENPELL KLAEEKGAAG INVVGICCTG
NETLMRHGIP IAGNFLQQEL AVITGAVEAM VVDVQCIMPS LGELTGCYHT KFISTSPKAD
FPNTVRMEFH EDRAYETATE IVRTAVENFP NRVPEKVTIP EEKQECMAGF SAEAILSALG
GSPDPLIEAI KGGAVRGIGA VVGCNNIKVK HNYGHVNLVK ELIENNVLVV TTGCNAIACA
EAGLLLPEAS ELAGDGLKAV CKALGIPPVL HMGSCVDISR ILVLSAAIAN RLGVDISDLP
AAGAAPEWMS EKAVSIGAYV VSSGVFTVLG TIPAVLGSQA VTSLLTGGLN DVVGASFAVE
PDPFKAADLM LEHIDEKRKA LGLN