| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0204 |
|---|
| Symbol | |
|---|
| ID | 3626295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 238439 |
|---|
| End bp | 240859 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637699095 |
|---|
| Product | acetyl-CoA decarbonylase/synthase complex subunit alpha |
|---|
| Protein accession | YP_303768 |
|---|
| Protein GI | 73667753 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1152] CO dehydrogenase/acetyl-CoA synthase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00314] CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00731411 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC TAACTACCGG GAGTTTTTCT ATAGAAGATC TGGAATCCGT TCAGATCACT
ATTAACAATA TTGTAGGGGC AGCAAAGGAG GCTGCTGAAG AAAAAGCAAA GGAGCTCGTT
AACGCAGGTC CCACACTTTT TGCAGGACTT GAGTCTTATA GGGATGACTG GAACTTCAAA
CTGCTTGACC GTTACGAGCC TGTTATCACC CCTATGTGTG ACCAGTGCTG CTACTGTACC
TATGGACCCT GTGATCTCTC AGGGAACAAA AGAGGTGCTT GTGGTATTGA CATGCTTGGT
CACAATGGGA GAGAATTCTT CCTCCGCGTG ATTACAGGTA CTGCCTGCCA TGCAGCTCAC
GGCCGCCACC TGCTCGACCA TTTGATAGAA ACCTTTGGAG AAGACTTACC CCTCAACCTT
GGGCAGTCCA ACGTGCTTAC CCCAAACATT ACAATCAGTA CCGGGCTTAG CCCGAAAACC
CTTGGTGAAG TTAAACCGGC AATGGAATAT GTTGAAGAAC AATTAACCCA GTTACTTGCA
ACAGTTCACG CCGGCCAGGA ATCCGCAGAG ATTGATTATG ACTCCAAAGC CCTCTTCAGT
GGTAGCCTTG ACCATGTAGG CATGGAAATT TCCGATATTG TACAGGTTAC AGCCTATGAT
TTCCCGAGAG CTGACCCAGA GGCTCCCTTA ATCGAAATAG GAATGGGAAC AATTGACAAG
TCCAAGCCTT TCCTCTGTGT TATTGGACAC AATGTCGCCG GCGTCACCTA TATGATGGAC
TACATGGAAG ATCACGACCT GACCGACAAG ATGGAGATCG CTGGGCTCTG CTGTACTGCA
ATAGACCTTA CAAGGTACAA GGAAGCCGAT AGAAGACCCC CATATGCAAA GGTCATCGGT
TCAATGTCCA AGGAGTTAAA GGTAATCCGT TCTGGAATGC CAGATGTCAT TGTTGTAGAC
GAACAATGTG TTCGTGGTGA TATTGTACCT GAAGCTCAGA AACTCATGAT TCCGGTAATT
GCATCAAATC CCAAGATCAT GTACGGGCTT CCGAACAGAA CAGATGCCGA CGTTGATGAG
ACCATTGAAG AACTTAGATC CGGAAAGATT CCAGGCTGTG TAATGCTTGA CTATGACAAG
CTTGGAGAAA TCTGCATCAG GCTCACGATG GAAATGGCTC CGATCCGCGA TGCTTCCGGT
ATCACTGCAA TTCCAACAGA TGAAGAATTC ACAAACTGGG TTATGAAATG TGCAGATTGT
GGAGCCTGCA TGATTGCGTG CCCAGAAGAA CTGGATATCC CCGAAGCTAT GGGATTTGCA
AAGGAAGGAG ATTACTCATA TTTAGATATA TTACACGACC AGTGTATCGG TTGTCGCCGC
TGCGAACAGG TCTGTAAGAA GGAAATACCA ATTCTCAACA TAATCGAAAA GGCAGCCCAG
AAACAGATTT CTGAAGAGAA AGGCTTGATG AGAGCTGGCA GAGGCCAGGT GTCTGACGCT
GAAATCCGTG CAGAAGGTCT TAACCTGGTT ATGGGTACCA CACCGGGTAT TATTGCAATT
ATCGGATGCC CGAACTATCC AGAAGGTACC AAGGACGTTT ACTACATCGC AGAGGAGTTC
CTGAAAAGAA ACTTTATCGT AGTGACGACA GGCTGCGGAG CAATGGACAT TGGTATGTTC
AAGGATGAGG ATGGTAAGAC TCTCTATGAG AGGTTCCCAG GAGGATTTGA GTGTGGGGGA
CTTGCCAACA TCGGATCTTG TGTCTCTAAC GCTCACATCA CCGGTGCAGC CGAGAAGGTC
GCAGCTATTT TTGCCCAGAG AACTCTTGAA GGCAACCTCG CCGAAATTGG AGACTACGTC
CTGAATCGTG TAGGTGCCTG CGGACTCGCC TGGGGTGCAT TCTCTCAGAA GGCGTCTTCA
ATCGGTACCG GATGTAATAT TCTTGGTATC CCTGCAGTAC TCGGTCCTCA TTCCTCTAAA
TATAGGAGAG CTCTTATTGC CAAGAACTAT GAAGAGGACA AGTGGAAAGT TTACGATGCA
AGGAATGGAC AAGAAATGGC GATTCCTCCA GCACCAGAAT TCCTCCTGAC TACAGCAGAA
ACCTGGCAGG AAGCAATTCC GATGATGGCA AAGGCATGCA TCCGTCCATC AGATAACAAT
ATGGGCAGAT CCATAAAGCT GACCCACTGG ATGGAACTCC ACAAAAAGTA CCTCGGATCG
AAACCAGAAG ACTGGTGGAA GTTCGTCAGG AATGAAGCTG ACCTCCCACT GGCTACCCGT
GAGGCGCTCC TCAAGGAGCT TGAAAAAGAA CATGGCTGGG AAATTGACTG GAAGAGGAAG
AAAGTCATCT CCGGTCCAAA GATCAAGTTC GATGTCTCGG CACAGCCTAC TAACCTCAAG
AGACTTTGCA AGGAGGCCTG A
|
|---|
| Protein sequence | MSKLTTGSFS IEDLESVQIT INNIVGAAKE AAEEKAKELV NAGPTLFAGL ESYRDDWNFK
LLDRYEPVIT PMCDQCCYCT YGPCDLSGNK RGACGIDMLG HNGREFFLRV ITGTACHAAH
GRHLLDHLIE TFGEDLPLNL GQSNVLTPNI TISTGLSPKT LGEVKPAMEY VEEQLTQLLA
TVHAGQESAE IDYDSKALFS GSLDHVGMEI SDIVQVTAYD FPRADPEAPL IEIGMGTIDK
SKPFLCVIGH NVAGVTYMMD YMEDHDLTDK MEIAGLCCTA IDLTRYKEAD RRPPYAKVIG
SMSKELKVIR SGMPDVIVVD EQCVRGDIVP EAQKLMIPVI ASNPKIMYGL PNRTDADVDE
TIEELRSGKI PGCVMLDYDK LGEICIRLTM EMAPIRDASG ITAIPTDEEF TNWVMKCADC
GACMIACPEE LDIPEAMGFA KEGDYSYLDI LHDQCIGCRR CEQVCKKEIP ILNIIEKAAQ
KQISEEKGLM RAGRGQVSDA EIRAEGLNLV MGTTPGIIAI IGCPNYPEGT KDVYYIAEEF
LKRNFIVVTT GCGAMDIGMF KDEDGKTLYE RFPGGFECGG LANIGSCVSN AHITGAAEKV
AAIFAQRTLE GNLAEIGDYV LNRVGACGLA WGAFSQKASS IGTGCNILGI PAVLGPHSSK
YRRALIAKNY EEDKWKVYDA RNGQEMAIPP APEFLLTTAE TWQEAIPMMA KACIRPSDNN
MGRSIKLTHW MELHKKYLGS KPEDWWKFVR NEADLPLATR EALLKELEKE HGWEIDWKRK
KVISGPKIKF DVSAQPTNLK RLCKEA
|
|---|
| |