| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1736 |
|---|
| Symbol | |
|---|
| ID | 6781724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1998981 |
|---|
| End bp | 2000981 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642767728 |
|---|
| Product | carbon-monoxide dehydrogenase, catalytic subunit |
|---|
| Protein accession | YP_002138548 |
|---|
| Protein GI | 197118121 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
|---|
| TIGRFAM ID | [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.306274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA AGAACACCTT CCCCAGCAAA GCAGACGTCA TCGCATCGAC CCCGGACCCG
GCAGTTCGGG AGATGCTGCG CCATATGGAG GCGGCCGGGA TCGAGACGCC ATTCGACCGG
TTCGATGCCC AGAAGCCGCA TTGCGGATTC GGCCTGAACG GGACCTGTTG CAAGAACTGC
CATATGGGCC CCTGCCGCAT CACCCCCAAG AGCCCCAAGG GTGTCTGCGG CGCCGACGCG
CACCTCATCG TCGCCCGCAA CATGCTCCGC TGGACCGCAG CCGGCGTCGC CGCACATGGC
GCACGCGGCC GTGAAGTTAT GCTGGCGCTG AAGGGCGCTG CCGACGGCTC CCTCGACCTG
CCGATCCTCG GTCCCGAGAA GGTGATCGCC ACGGCGAAGT CGTTCGGCAT CCACGACGAG
GCAAAGAGCA TCGAGGAGAT GGCGGGTGAA ATAGCCATGA TCCTTTTGGA GGACCTCTGC
CGCACCATCC CCGGCCCGCA TAAGACCCTG GAAGCGATGG CCCCGGCCGA GCGCATCCAG
GTCTGGAAGG ACCTGGACAT TCTCCCGATC GGCGCCTACC ACGAGGTCTT CGAGGCGCTG
CACCGCACCG GCACCGGCAC CGACGGCGAC TGGCGCAACG TGGCGGACCA GATACTGCGC
TGCGGCCTCG CCTTTGCCTG GAGCAGCGTG GTCGGCTCGG CCATCGCCAT GGACTGCCTC
TACGGCCTCC CCAAAAGAAG CCGCGTGAGC ACCAACCTGG GCGCCATCAC CCTGGACAGC
GTCAACATCG CGGTTCACGG CCACTCGCCC GTGCTGGTGG CTGCCATCGT CAAGGCTGCG
CGCGGCGAAA CGTTGCTCTC CGAGGCACGT GCCGCCGGCG CCGGCACTAT CAAGCTCTAC
GGCATCTGCT GCTCCGGACA CTCGGCTCTG GCAAAGTTCG GCGACATAAC GCCCTTGGCC
AACGCGGCAG GCGCGGAACT GACCCTGGCC ACTGGCGCCC TGGATCTCTG GGTAGCCGAC
GTGCAGGACG TCTTCCCGGG AATCATGGAC GTCGCCGCCT GCTTCCACAC CCGGGTGGTC
ACCACCAGCG ACTCCGCCAG GCTTCCGGGC GCAGAGCACA TCGCCTTCGA CCACCACCAC
TCGAACCTCG ACCAGGCGGA CATTCTTGCC GAGCGCATCG TCCGCCGCGG CATACAGGCC
TACGGCGAGC GCCAGGCCGG CAAAGTGTTC GTCCCCAAGG CCCGCATGGA TGCCGAGGTC
GGCTTCTCTG TCGAGAACAT CCTGGCGACC TTCGGCGGCG CCGAGCCGTT GCTGGAGCAC
CTGAAAAGCG GCCGCATCCG CGGCGTGGTG AACCTGGTGG GGTGCAACAA CCCGAAGGTG
GTGTACGAAG AGGCCATCGT CAGGGTGGCC GAGGAACTGA TCGCCCACGA CGTGCTGGCG
CTCACCAACG GCTGCGCCGC TTTCGCCCTT TTGAAGATGG GGTTCTGCCT CCCCGAAGGG
CTGGAAGGAA GCGGACCGGG GCTCAACGCG GCACTCGCGC CTCTCAACCT CCCGCCGGTG
TGGCACATGG GTGAATGCCT CGACAACGCA AGGGCCTCCG CCTTTTTCCG GACCATCTCC
GCGGCTTCCG GTGAATCGCT CCCCCGGCTG CCGCTCGCAG TTTCCAGTCC CGAGTGGTCC
AACGAGAAAG GTGTCGGGGC GGCCTTAAGC TTCCGCTTGT TGGGGCTCAA CTCCTATCAC
TGCATCACGC CGCCGGTCGC AGGCTCCGAC CGGGTCTCCG ATTTCTTCTA TCAGGACACC
AGGGAGACAC TCGGCTCAGT AATGGTGGTT GACCAGGACC CGGTCCAGTT GGCCCAGCGC
ATAGTGGCAG ACTTCGACCA GCGGCGGGAG GCCCTGGGTT GGCAGAGCGC AGCCCCTGCG
GCCAACGGGC GCCTCTCCGC GCTGCAGGAA GAAAAGGCAC ACCAATTCGC CCACGATCAT
GGGCACACGC ACAGTCACTA G
|
|---|
| Protein sequence | MTKKNTFPSK ADVIASTPDP AVREMLRHME AAGIETPFDR FDAQKPHCGF GLNGTCCKNC
HMGPCRITPK SPKGVCGADA HLIVARNMLR WTAAGVAAHG ARGREVMLAL KGAADGSLDL
PILGPEKVIA TAKSFGIHDE AKSIEEMAGE IAMILLEDLC RTIPGPHKTL EAMAPAERIQ
VWKDLDILPI GAYHEVFEAL HRTGTGTDGD WRNVADQILR CGLAFAWSSV VGSAIAMDCL
YGLPKRSRVS TNLGAITLDS VNIAVHGHSP VLVAAIVKAA RGETLLSEAR AAGAGTIKLY
GICCSGHSAL AKFGDITPLA NAAGAELTLA TGALDLWVAD VQDVFPGIMD VAACFHTRVV
TTSDSARLPG AEHIAFDHHH SNLDQADILA ERIVRRGIQA YGERQAGKVF VPKARMDAEV
GFSVENILAT FGGAEPLLEH LKSGRIRGVV NLVGCNNPKV VYEEAIVRVA EELIAHDVLA
LTNGCAAFAL LKMGFCLPEG LEGSGPGLNA ALAPLNLPPV WHMGECLDNA RASAFFRTIS
AASGESLPRL PLAVSSPEWS NEKGVGAALS FRLLGLNSYH CITPPVAGSD RVSDFFYQDT
RETLGSVMVV DQDPVQLAQR IVADFDQRRE ALGWQSAAPA ANGRLSALQE EKAHQFAHDH
GHTHSH
|
|---|
| |