Gene Pcar_0888 details

Gene Information

• Locus tag: Pcar_0888
• Symbol: cooS2
• ID: 3724185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 1045116
• End bp: 1047005
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637750481
• Product: carbon-monoxide dehydrogenase, catalytic subunit
• Protein accession: YP_356313
• Protein GI: 77918498
• COG category: [C] Energy production and conversion
• COG ID: [COG1151] 6Fe-6S prismane cluster-containing protein
• TIGRFAM ID: [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.186953
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGCT GTGCCTCGGC AGATTCCTGC CTGTCTGATT ACCTGGAAAG CAAAACCGAC 
ATCAACACCG CTTTTGACCG TTTTGCCGAA CAAAAAGTGA AATGCGGTTT CGGCAAACTC 
GGCGTCTGTT GCCGACTCTG TTCCAACGGA CCCTGCCGGA TCACTCCCGA CTCCCCCAAA 
GGTGTCTGCG GTGCGACCGC CGACAGCATC GTAGCCCGCA ACTTTCTGCG CATGGTCGCC 
GCCGGCTCCG CCTGTTACCT GCATGTCTGC GAAGCGACCG CCAAACGTCT CAAGGCTATC 
GGCGACGGTG TCTCCCCCCT GCCGATCCGC TCCCAGCAGG CCCTGGACGA ACTGTCCGCC 
CTGTTCGGCA TCGAAGCGGA AACCACCGCA GAAAAAGCCC GCCTGGTGGC CGAAAAAGTT 
CTGGCCGACC TGTACAAACC CCGCGATGAA AAAATGGAAC TGGTTGAATT CCTGGCCCCC 
CAGGAACGCA TCGACACCTG GAACAAACTC GGCATCTTCC CCGGCGGCGC TAAGGCGGAA 
GTGTTCGATG CTCTGGTTAA AACCAGCACC AATCTCAATA CCGATCCCGT CGACCAGATG 
CTCCATGTTC TTAACCTCGG CATCAGCACC GGCCTGTACG GTCTGGCTCT GACCAATCTG 
ATGAACGATG TCATCATGGG CGAACCGGTC ATTCGCACCG CCGCCACCGG CTTCTCCGTC 
GCCGACCCCG ACTACGTCAA CATCGCCGTC AGCGGTCACA GCCACTCGGT TTTTGCCGGA 
CTCATTGCCT TATTGGAAAC AGACGCCGGC CAGGCCATCG GTCGCGAGGC CGGGGCCAAG 
GGCATCAAGC TGGTCGGCAT GACCTGCGTC GGTCAGGACA TGCAGTTGCG CGCCGGCTCC 
AGCGGCACCG ATATATTCAG CGGCCAGGCC GGTAACAACT TTACCCAGGA AGCGCTGCTT 
TCCACCGGTG CCATCGACAT GGTGATCAGC GAATTCAACT GTACCCTGTC CGGCATCGAG 
CCCATCGCCG AAAAACAGAA CGTCAAACTG ATCTGCCTTG ACGATGTGGC CAAATTGTCA 
TCTGCTGAAC TGCAGCCGGA TATACTTGGC AAAGAGATGG AACTGGCGGA AAAACTGGCC 
CGCATGGCCG CAACCCAGCA TAAACAACGC CGCGCCATCG ATACCGGCGT GATCCTCGAC 
ATTCCGCAGC ACGGTTTCGG CGACGTGGTT ACCGGGATCA GCGAAAAGTC GCTGGTCGAC 
TTCCTCGGCG GGTCGGTGCA ACCGTTGATC GACCTGATCG TCAGCGGCCA GATCAAAGGC 
GTGGTCGGCG TGCTCGGCTG CTCCAACCTG GCCGAAGGCG GTCACGATGT GATGACTGTC 
AACCTCACCC GGGAACTGAT CAAGCGCGAC ATCCTGGTTC TGTCGGCCGG CTGCACCACC 
GGCGGGCTGG CCAATGTCGG CCTGTGCTCC CCCGGCGCCA GGGATCTTGC CGGCCCCGGC 
CTCAAGGCTG TATGCGAAGC CCTCGGTATC CCGCCGGTAC TCAACTTCGG CCCCTGCCTG 
AGCATCGGCC GCATCGAAAT GGTGGCCAAG GCTCTGGCGC AAGCCATGCA CATCACCATG 
CCGGAATTGC CGGTGGTGAT CAGCGCTCCC CAGTGGCTGG AAGAACAGGC CCTGGCCGAC 
GGCGCCTTCG GACTGGCCAT GGGATTGACC CTGCACCTGG CCCAGGTACC TCCGGTAGCC 
GGTTCCCCCA TCATCACCAA ACTCCTCACC GAAGACCTTC CGGGCATCAC CGGCGGGCGG 
CTCTTCATCG AATCGGATCC GGTCAAAACC GCTGAACAGA TGGCTGCGAT TATTGCCGGT 
AAACTCGGAG CGCTGGGGGT CGCCGCATGA 

 

Protein sequence

MTRCASADSC LSDYLESKTD INTAFDRFAE QKVKCGFGKL GVCCRLCSNG PCRITPDSPK 
GVCGATADSI VARNFLRMVA AGSACYLHVC EATAKRLKAI GDGVSPLPIR SQQALDELSA 
LFGIEAETTA EKARLVAEKV LADLYKPRDE KMELVEFLAP QERIDTWNKL GIFPGGAKAE 
VFDALVKTST NLNTDPVDQM LHVLNLGIST GLYGLALTNL MNDVIMGEPV IRTAATGFSV 
ADPDYVNIAV SGHSHSVFAG LIALLETDAG QAIGREAGAK GIKLVGMTCV GQDMQLRAGS 
SGTDIFSGQA GNNFTQEALL STGAIDMVIS EFNCTLSGIE PIAEKQNVKL ICLDDVAKLS 
SAELQPDILG KEMELAEKLA RMAATQHKQR RAIDTGVILD IPQHGFGDVV TGISEKSLVD 
FLGGSVQPLI DLIVSGQIKG VVGVLGCSNL AEGGHDVMTV NLTRELIKRD ILVLSAGCTT 
GGLANVGLCS PGARDLAGPG LKAVCEALGI PPVLNFGPCL SIGRIEMVAK ALAQAMHITM 
PELPVVISAP QWLEEQALAD GAFGLAMGLT LHLAQVPPVA GSPIITKLLT EDLPGITGGR 
LFIESDPVKT AEQMAAIIAG KLGALGVAA