Gene Daud_0870 details

Gene Information

• Locus tag: Daud_0870
• ID: 6025770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 927279
• End bp: 929165
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641593682
• Product: carbon-monoxide dehydrogenase, catalytic subunit
• Protein accession: YP_001717015
• Protein GI: 169831033
• COG category: [C] Energy production and conversion
• COG ID: [COG1151] 6Fe-6S prismane cluster-containing protein
• TIGRFAM ID: [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.404437
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAAAC CGGGTACCAC CGGCCGGGTG ATCCCCGCCC TGGACCGGGC GCGCGAGATC 
AAGCCCTGCC CGCTCGGGGC GGGCGAGAGC TGCTGCCGGG TTTGCGCGAT GGGGCCTTGC 
CGGGTAACGG AGTCCGGAAA GGGGGCCCGG GTGGGAGTCT GCGGGGCGAC GCCCGACACC 
ATCGCCGCCC GCAACCTGTG CCGGATGATC GCCGCGGGCA CGGCCGCTCA TTCCGACCAC 
GCGCGGGAGG TGGTGCAGAC CTTTTGCGCG GTGGCCCGGG GAACGGCCCC CGGGTTCGAG 
CTTTGCGACC GGGAGAAGCT CTCACGCCTG GCGGCGCAAC TGGGGTGCGG CAAGGCGGAA 
GACCCCGCGG TGCTGGCGCG GGAAGTGGGC AAACTGTTCC TCGGCGAATT CGGTCGGCAG 
GAGGGGGAAC TGGCGCTGGC CGCGCTCGCG CCTCCCCGGC GGCTGGAACG GTGGCGCCGC 
CTTGGACTGG TGCCCCGGGG CATCGACCGG GAGGTGGTGG AGAGCCTGCA CCGGACCCAC 
ATGGGGGTCG ACCAGGAGGC ACTGCACCTG CTGCACCAGG GTACCCGCAC CGCGCTGGCG 
GACGGCTGGG GTGGGTCGGT GATCGCCACC GCGGTGCGGG ATGTCCTGTT CGGAACTCCC 
CGGCCGGTCC GCTCCCGGGT GGACCTGGGG GTGTTAAAGC CGGACTGCGT GAATATCGTG 
GTCCACGGCC ATGAGCCCCT GCTGCCGGAG GTACTGGTCC GCTTGGCTGC GGACGGGGAA 
ATGACCGCCC GCGCCCGCGC GGTGGGGGCG GCTGGGGTCA ATATCGCCGG AATGTGCTGC 
ACGGCGAATG AAATCTTGAT GCGGCACGAC GTGCCGGTCG CCAGCCACTT CCTGCAGCAG 
GAACTGGCGA TCATCACCGG GGCCGTGGAA CTGATGCTGG TGGACGTGCA GTGCGTGATG 
CAGGGCCTGG CGGCGGTGGC CGCCTGCTAC CACACCCGGC TGGTGACCAC TTCGGAGAAG 
GCCCGGATCA AGGGCGCGCG CCACGTGGAG TTTTCGCCGG CGACCGCTCT GGACACCGCC 
CGGGAACTTC TTTATGCGGC GATAGACAAC TTCCCGAACC GCCGGCGGGT GGACATCCCG 
CCGCAGGCCG TCGAACTGGT GACCGGATTC GGGCAGGAGA GCATCCGCCA CGCCCTGGGG 
GGCCGTTTCC GCGGTTCCTA CCGGATGTTG AACGAAAACA TCATTAACGG GTGGATCCGG 
GGGGTGGCCG GAGTGGTTGG TTGCACCAAC CCCCGGGCCG CTTCCGGGGC GAGCCACGGG 
GTGCTGGTGC GGGAGCTGGT GGCAAATGAC GTGCTGGTGC TGGTCACCGG GTGCGCGGCG 
CTGGCCTGCG CCCGGGATGG GCTGCTGGTG CCGGAGGCGG CCGACAGCGC CGGCCCGGGT 
TTGCGGGAGG TCTGCGAGGC GTTGGGGATT CCGCCGGTGC TGCACTGCGG CTCCTGCGTG 
GACAACAGCC GGATTCTGAT GATGGCGGCC GAGATGGTCC GTGCGGGGGG CCTCGGGGAG 
GACCTATCGG ACCTGCCGGT GGCCGGCTGC GCCCCGGAGT GGATGAGCGA GAAGGCGCTG 
GCTGTCGGCC AGTATTTCAT CGGGAGCGGG ATCTCCGTCG GCCTGGGCGT GTACTTCCCG 
GGCGCGGACA GCAAGGAGTT CGCCGCGCAG GTGTTCGAAG GGCTGACGCA AGACTACGGG 
GCGGCCTGGT TTTTCGAGCC TGATCCCCAA GCCTTGGCCC GGAAGATCCT GGCCCACATC 
GAGGAGAAAC GCCGCGCCCT CGGCATCGAG GGCCGGCGGG AGCGCGTGTT GTACGACATG 
AAGATGAGGA GGCGTCTCGA TGTCTAA 

 

Protein sequence

MDKPGTTGRV IPALDRAREI KPCPLGAGES CCRVCAMGPC RVTESGKGAR VGVCGATPDT 
IAARNLCRMI AAGTAAHSDH AREVVQTFCA VARGTAPGFE LCDREKLSRL AAQLGCGKAE 
DPAVLAREVG KLFLGEFGRQ EGELALAALA PPRRLERWRR LGLVPRGIDR EVVESLHRTH 
MGVDQEALHL LHQGTRTALA DGWGGSVIAT AVRDVLFGTP RPVRSRVDLG VLKPDCVNIV 
VHGHEPLLPE VLVRLAADGE MTARARAVGA AGVNIAGMCC TANEILMRHD VPVASHFLQQ 
ELAIITGAVE LMLVDVQCVM QGLAAVAACY HTRLVTTSEK ARIKGARHVE FSPATALDTA 
RELLYAAIDN FPNRRRVDIP PQAVELVTGF GQESIRHALG GRFRGSYRML NENIINGWIR 
GVAGVVGCTN PRAASGASHG VLVRELVAND VLVLVTGCAA LACARDGLLV PEAADSAGPG 
LREVCEALGI PPVLHCGSCV DNSRILMMAA EMVRAGGLGE DLSDLPVAGC APEWMSEKAL 
AVGQYFIGSG ISVGLGVYFP GADSKEFAAQ VFEGLTQDYG AAWFFEPDPQ ALARKILAHI 
EEKRRALGIE GRRERVLYDM KMRRRLDV