56 homologs were found in PanDaTox collection
for query gene Dhaf_0882 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0072  carbon-monoxide dehydrogenase, catalytic subunit  54.83 
 
 
635 aa  665    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0882  carbon-monoxide dehydrogenase, catalytic subunit  100 
 
 
635 aa  1289    Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1427  carbon-monoxide dehydrogenase, catalytic subunit  52.77 
 
 
639 aa  650    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3792  carbon-monoxide dehydrogenase, catalytic subunit  53.25 
 
 
635 aa  656    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.117932  n/a   
 
 
-
 
NC_007925  RPC_4498  carbon-monoxide dehydrogenase, catalytic subunit  52.52 
 
 
663 aa  644    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.325797 
 
 
-
 
NC_007355  Mbar_A3525  carbon monoxide dehydrogenase  52.76 
 
 
624 aa  629  1e-179  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_012560  Avin_04490  carbon-monoxide dehydrogenase, catalytic subunit  50.65 
 
 
632 aa  622  1e-177  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1341  carbon-monoxide dehydrogenase, catalytic subunit  53.55 
 
 
623 aa  618  1e-175  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013216  Dtox_2327  carbon-monoxide dehydrogenase, catalytic subunit  50.79 
 
 
621 aa  611  1e-173  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00453727  normal  0.0261188 
 
 
-
 
NC_011830  Dhaf_2798  carbon-monoxide dehydrogenase, catalytic subunit  47 
 
 
672 aa  592  1e-168  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0057  carbon-monoxide dehydrogenase, catalytic subunit  48.45 
 
 
645 aa  577  1.0000000000000001e-163  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.612526  n/a   
 
 
-
 
NC_011832  Mpal_0842  carbon-monoxide dehydrogenase, catalytic subunit  48.89 
 
 
629 aa  577  1.0000000000000001e-163  Methanosphaerula palustris E1-9c  Archaea  normal  0.183197  normal  0.106762 
 
 
-
 
NC_002939  GSU2098  carbon monoxide dehydrogenase subunit  47.53 
 
 
640 aa  573  1.0000000000000001e-162  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0618  carbon-monoxide dehydrogenase, catalytic subunit  47.68 
 
 
641 aa  573  1.0000000000000001e-162  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2875  carbon-monoxide dehydrogenase, catalytic subunit  48.1 
 
 
626 aa  573  1.0000000000000001e-162  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.843098  normal 
 
 
-
 
NC_007644  Moth_1203  carbon-monoxide dehydrogenase, catalytic subunit  46.46 
 
 
674 aa  562  1.0000000000000001e-159  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3028  carbon-monoxide dehydrogenase, catalytic subunit  48.5 
 
 
625 aa  561  1e-158  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1234  carbon-monoxide dehydrogenase, catalytic subunit  47.38 
 
 
629 aa  555  1e-157  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0405701  normal  0.377093 
 
 
-
 
NC_011883  Ddes_0382  carbon-monoxide dehydrogenase, catalytic subunit  48.29 
 
 
631 aa  551  1e-155  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.72739  n/a   
 
 
-
 
NC_013173  Dbac_0934  carbon-monoxide dehydrogenase, catalytic subunit  47.94 
 
 
627 aa  549  1e-155  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.502316  n/a   
 
 
-
 
NC_007796  Mhun_1272  carbon-monoxide dehydrogenase, catalytic subunit  46.68 
 
 
628 aa  545  1e-153  Methanospirillum hungatei JF-1  Archaea  normal  0.142133  normal 
 
 
-
 
NC_008751  Dvul_1133  carbon-monoxide dehydrogenase, catalytic subunit  47.89 
 
 
629 aa  535  1e-151  Desulfovibrio vulgaris DP4  Bacteria  normal  0.394682  normal  0.139391 
 
 
-
 
NC_013216  Dtox_1270  carbon-monoxide dehydrogenase, catalytic subunit  43.38 
 
 
673 aa  533  1e-150  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00748773  normal 
 
 
-
 
NC_011769  DvMF_2233  carbon-monoxide dehydrogenase, catalytic subunit  47.32 
 
 
629 aa  528  1e-149  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_3780  carbon-monoxide dehydrogenase, catalytic subunit  42.61 
 
 
674 aa  518  1.0000000000000001e-145  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.288316  normal 
 
 
-
 
NC_013385  Adeg_0335  carbon-monoxide dehydrogenase, catalytic subunit  47.3 
 
 
642 aa  516  1.0000000000000001e-145  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_3185  carbon-monoxide dehydrogenase, catalytic subunit  44.41 
 
 
679 aa  511  1e-143  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.579976  n/a   
 
 
-
 
NC_009712  Mboo_0884  carbon-monoxide dehydrogenase, catalytic subunit  44.95 
 
 
653 aa  508  1e-143  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.17634  normal  0.977834 
 
 
-
 
NC_009943  Dole_1461  carbon-monoxide dehydrogenase, catalytic subunit  41.98 
 
 
656 aa  456  1e-127  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.0000000668721  n/a   
 
 
-
 
NC_008554  Sfum_2566  carbon-monoxide dehydrogenase, catalytic subunit  42.09 
 
 
663 aa  447  1.0000000000000001e-124  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0870  carbon-monoxide dehydrogenase, catalytic subunit  42.32 
 
 
628 aa  439  9.999999999999999e-123  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.404437  n/a   
 
 
-
 
NC_007644  Moth_1972  carbon-monoxide dehydrogenase, catalytic subunit  38.15 
 
 
655 aa  436  1e-121  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00000154748  normal 
 
 
-
 
NC_011898  Ccel_0438  carbon-monoxide dehydrogenase, catalytic subunit  36.01 
 
 
663 aa  408  1.0000000000000001e-112  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000530778  n/a   
 
 
-
 
NC_009012  Cthe_2801  carbon-monoxide dehydrogenase, catalytic subunit  37.76 
 
 
670 aa  400  9.999999999999999e-111  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000137875  n/a   
 
 
-
 
NC_009802  CCC13826_0236  carbon-monoxide dehydrogenase, catalytic subunit  36.38 
 
 
679 aa  396  1e-109  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1736  carbon-monoxide dehydrogenase, catalytic subunit  37.22 
 
 
666 aa  398  1e-109  Geobacter bemidjiensis Bem  Bacteria  normal  0.306274  n/a   
 
 
-
 
NC_009715  CCV52592_1131  carbon-monoxide dehydrogenase, catalytic subunit  36.54 
 
 
676 aa  392  1e-108  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000338326  n/a   
 
 
-
 
NC_007517  Gmet_1902  carbon-monoxide dehydrogenase, catalytic subunit  37.05 
 
 
669 aa  388  1e-106  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000268472  hitchhiker  0.000000000000110792 
 
 
-
 
NC_010718  Nther_0860  carbon-monoxide dehydrogenase, catalytic subunit  34.06 
 
 
695 aa  362  1e-98  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.199727  normal  0.922779 
 
 
-
 
NC_011830  Dhaf_1166  carbon-monoxide dehydrogenase, catalytic subunit  34.57 
 
 
637 aa  343  4e-93  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2933  carbon-monoxide dehydrogenase, catalytic subunit  33.86 
 
 
623 aa  335  2e-90  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000257353  normal 
 
 
-
 
NC_011898  Ccel_2918  carbon-monoxide dehydrogenase, catalytic subunit  32.71 
 
 
710 aa  332  2e-89  Clostridium cellulolyticum H10  Bacteria  normal  0.0596914  n/a   
 
 
-
 
NC_007498  Pcar_0888  carbon-monoxide dehydrogenase, catalytic subunit  33.18 
 
 
629 aa  329  8e-89  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.186953  n/a   
 
 
-
 
NC_009253  Dred_0652  carbon-monoxide dehydrogenase, catalytic subunit  32.61 
 
 
707 aa  328  2.0000000000000001e-88  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00052858  n/a   
 
 
-
 
NC_008639  Cpha266_0149  carbon-monoxide dehydrogenase (acceptor)  32.28 
 
 
680 aa  309  1.0000000000000001e-82  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1216  carbon-monoxide dehydrogenase, catalytic subunit  30.23 
 
 
648 aa  308  3e-82  Methanosaeta thermophila PT  Archaea  normal  0.655192  n/a   
 
 
-
 
NC_007355  Mbar_A3717  carbon-monoxide dehydrogenase, catalytic subunit  31.97 
 
 
634 aa  307  3e-82  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_0805  acetyl-CoA decarbonylase/synthase complex subunit alpha  32.48 
 
 
778 aa  55.1  0.000003  Methanococcus maripaludis C5  Archaea  normal  0.471946  n/a   
 
 
-
 
NC_009637  MmarC7_0227  acetyl-CoA decarbonylase/synthase complex subunit alpha  31.85 
 
 
778 aa  53.5  0.00001  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_1673  acetyl-CoA decarbonylase/synthase complex subunit alpha  31.21 
 
 
778 aa  53.5  0.00001  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0311  acetyl-CoA decarbonylase/synthase complex subunit alpha  32.5 
 
 
779 aa  53.1  0.00002  Methanococcus vannielii SB  Archaea  normal  0.435383  n/a   
 
 
-
 
NC_007355  Mbar_A0204  acetyl-CoA decarbonylase/synthase complex subunit alpha  33.98 
 
 
806 aa  50.1  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00731411  normal 
 
 
-
 
NC_007955  Mbur_0858  acetyl-CoA decarbonylase/synthase complex subunit alpha  32.12 
 
 
802 aa  48.9  0.0003  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.00000000764937  n/a   
 
 
-
 
NC_010424  Daud_0105  acetyl-CoA decarbonylase/synthase complex subunit alpha  29.29 
 
 
766 aa  48.9  0.0003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0690  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.45 
 
 
787 aa  45.8  0.003  Methanospirillum hungatei JF-1  Archaea  normal  0.676741  normal  0.475894 
 
 
-
 
NC_007355  Mbar_A0434  acetyl-CoA decarbonylase/synthase complex subunit alpha  28.7 
 
 
806 aa  44.7  0.005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
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