Gene Daud_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0105 
Symbol 
ID6026502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp110679 
End bp112979 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content57% 
IMG OID641592958 
Productacetyl-CoA decarbonylase/synthase complex subunit alpha 
Protein accessionYP_001716305 
Protein GI169830323 
COG category[C] Energy production and conversion 
COG ID[COG1152] CO dehydrogenase/acetyl-CoA synthase alpha subunit 
TIGRFAM ID[TIGR00314] CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA CAGAGAAGTT AAGAGAGAAA ATCAACGAGA TCATCAGAGC CGAAGAATCC 
TGGGAGGCCG TGGGCCAAAC ACCGATGCCC CGGGTGACTG ACTTGCGCAA CTGGGACTTT
CGCCTGATGA AAACCTACCG GCCTTTTTAT GCACCGTTTT GCGATCTTTG CTGTTTATGC
AATTTCGGCA AGTGCGACTT GACGCAAGAT CGCAAAGGGG CCTGCGGAAT CGACATGGCC
ACCCAGCAGG CCAGGATGAT TTTGATCGCC TGCTTGATGG GTGCCGCCGC CCACGGAGCG
CATGGGCGCC ACCTGATCGA GCACCTTATC GAAAAACACG GCGAGGATTA CCCGCTTGTT
TTGGGGGACC AGGTCAATGT GGAAGCGCCG ATCATCAGGA CCGTGCTCGG TTTAAAGCCG
CAAACCCTCG GCGACCTGCG CAAGGCCGTT GAGTATGTGG AAAGGGAGTT TATCCATCTG
GTTGCCGCCA CCCATACCGG ACAGGAAGGG AGCAATTTGG ACTACGAGTC GAAAGCCTTC
CACTGCGGGA TGCTGGACCA CGTAGCCTTG GAGGCCTGCG ACCTAGCCCA AATCACCGGG
TTTAACTATC CGACGTCGGT GGTCGAAACA CCGCTGGTCG AGTTGGGCTG GGGCACCATT
GACCGCACGA AGCCGGTGAT CCTACTGGTG GGCCACAACG CCGCGGCCGC CAACAGTATG
ACGGATTACC TGCGCAAAAA CAACCTCCTC GATCAAGTGG AACTGGCCGG GATCTGTTGT
ACGGCGTTAG ACGCCACCCG GTACAACGCG GGCGCGAAGG TGGTCGGCCC TTTGGCGCAG
CAGCGCTTTT TCCTGAAAAC CGGCCTGGCT GACGTCATTG TGACCGATGA GCAGTGCGTG
CTTACCGACA TTCCGGCCCT CGCCGGAGAA ACAGGCGCGG CGCTCATCGC CTGGTCGGAC
AAAATCTGCT ACGGCCTGGA CAACGTCACC GAAAAAGAAA CGGACGAGAT TGTGAAAATG
ATTGTGGCCG GGGAAAAGAA ACAGGTCCTT GTTTTGGACT CCGACAAAGC GGCGGAAGTG
GCGGTGAAGG TGGCGTTGGC CTTAGCGCCG GCGCGCAAAA AATTCATTCT TTCCCCCGCG
CAAGCCGTCG AGATCGCCGG CCGGTGCCGA GAGAAGTGCG AGAAGTGTCA TCAAAACTGC
GCCAACCTGC TGCCGGTCGG CACGGCGGTC AGCCGGGCGG GTGAAGGCGA TTTGGAACCA
CTTGCCAAAC TGTTCAGAAA ATGCGTCGGT TGCGGAAAAT GTGAAGAAGT CTGCGATTTT
AATCTTCCTA TCCTCAAGTT AATGGCGGCG GCGGCTTCGG CGGAGAAATA CAAAGTGCGG
GTCGGCCGGG GGCCGATCCA CGACGTGGAA ATAAGAAAAG TAGGTTCCCC CATCGTTTTG
GGTACCATCC CGGGAGTTGT GCTGTTTGCC GGGTGTTCCA ATTATCCGGA CATTGGTGAT
GTGGCCTGGA TGGCGGAGGA GTTGGCGCGG CGCAAGTACA TCGTCTGCCT TTCCGGATGC
GCGGCAATGG CGGCGGGGAT GTACAAAGAC GCCGAAGGAA GGACCATTTA CGAAAAGTAC
CCGCCTTCAT TTGACGCCGG CGGCGTCCTC AACGTGGGTT CCTGCGTCTC CAACGCGCAC
GTGGTCGGTG CCGCCATAAA GATCGCAAAC ATCTTCGCCA ATTTGCCCAG CCGGGCCAAT
TATGAATTGA TTGCCGACTA CATCCTCAAC CGGGTGGGCG CCTGTGCCGT GGTCTGGGGT
CCCTATTCCC AGAAGGCCTT GGCCATCGGC ACGGGGGCGA TACGGTGGGG GATTCCTCTT
TTGCTTGGCC CCCACGGCGC CAAATACAGA AGGTTGTTCA TGAGCAAGAA GGAATACGAC
GACTGGACGG TTATCGATGG CCGGACCGAG CAGTTGGTCG ATACCCGGGA GCCCACCCCG
GAGCACATGG CCATCGTCGT GGAAACCAGG GAAAGGGCTC TGCTTACTAT CATCAAGCTT
TGCATGCGGC GAAACGATAC TGCTCCCGGC CGGGCCATCA AGTTGCATCA GTACATCTCC
GTTTATAAAG AACATTTGGG CACTCTTCCT GATGACCTGC AGAACTTCGT CCGCACCGAA
CGGGATGCGC CCCTGGTTTA TAAAAAAGAG GTGCTGGCTT ACTTAAATGA AGTCGGCTGG
CAGCCGAAGC CGACTTTGTC CTTGCCCACC ATCATCGGCA CTTACGAAAC GAAGGTGCCC
GTTTCGGCCA CGGTAAAATA G
 
Protein sequence
MSKTEKLREK INEIIRAEES WEAVGQTPMP RVTDLRNWDF RLMKTYRPFY APFCDLCCLC 
NFGKCDLTQD RKGACGIDMA TQQARMILIA CLMGAAAHGA HGRHLIEHLI EKHGEDYPLV
LGDQVNVEAP IIRTVLGLKP QTLGDLRKAV EYVEREFIHL VAATHTGQEG SNLDYESKAF
HCGMLDHVAL EACDLAQITG FNYPTSVVET PLVELGWGTI DRTKPVILLV GHNAAAANSM
TDYLRKNNLL DQVELAGICC TALDATRYNA GAKVVGPLAQ QRFFLKTGLA DVIVTDEQCV
LTDIPALAGE TGAALIAWSD KICYGLDNVT EKETDEIVKM IVAGEKKQVL VLDSDKAAEV
AVKVALALAP ARKKFILSPA QAVEIAGRCR EKCEKCHQNC ANLLPVGTAV SRAGEGDLEP
LAKLFRKCVG CGKCEEVCDF NLPILKLMAA AASAEKYKVR VGRGPIHDVE IRKVGSPIVL
GTIPGVVLFA GCSNYPDIGD VAWMAEELAR RKYIVCLSGC AAMAAGMYKD AEGRTIYEKY
PPSFDAGGVL NVGSCVSNAH VVGAAIKIAN IFANLPSRAN YELIADYILN RVGACAVVWG
PYSQKALAIG TGAIRWGIPL LLGPHGAKYR RLFMSKKEYD DWTVIDGRTE QLVDTREPTP
EHMAIVVETR ERALLTIIKL CMRRNDTAPG RAIKLHQYIS VYKEHLGTLP DDLQNFVRTE
RDAPLVYKKE VLAYLNEVGW QPKPTLSLPT IIGTYETKVP VSATVK