More than 300 homologs were found in PanDaTox collection
for query gene BRA1088 on replicon NC_004311
Organism: Brucella suis 1330



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004311  BRA1088  acyl-CoA dehydrogenase  100 
 
 
380 aa  773    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  65.97 
 
 
384 aa  524  1e-148  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  65.35 
 
 
384 aa  514  1e-144  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  65.35 
 
 
384 aa  514  1e-144  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  64.14 
 
 
384 aa  508  1e-143  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  63.12 
 
 
386 aa  497  1e-139  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  61.42 
 
 
383 aa  497  1e-139  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  62.04 
 
 
384 aa  494  9.999999999999999e-139  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  62.04 
 
 
384 aa  494  9.999999999999999e-139  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  61.78 
 
 
385 aa  492  9.999999999999999e-139  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  63.45 
 
 
386 aa  492  9.999999999999999e-139  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  61.78 
 
 
383 aa  488  1e-137  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  62.5 
 
 
386 aa  489  1e-137  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  60.47 
 
 
385 aa  483  1e-135  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  61.56 
 
 
385 aa  483  1e-135  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  62.66 
 
 
386 aa  481  1e-135  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  61.56 
 
 
385 aa  483  1e-135  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  60.47 
 
 
385 aa  483  1e-135  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  62.08 
 
 
385 aa  481  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  60 
 
 
385 aa  479  1e-134  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  59.48 
 
 
385 aa  476  1e-133  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  60.52 
 
 
386 aa  477  1e-133  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  61.42 
 
 
382 aa  461  1e-129  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  60.63 
 
 
382 aa  462  1e-129  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  59.95 
 
 
388 aa  463  1e-129  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  55.97 
 
 
429 aa  439  9.999999999999999e-123  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  56.12 
 
 
418 aa  437  1e-121  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  56.8 
 
 
385 aa  432  1e-120  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  53.42 
 
 
390 aa  423  1e-117  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  52.76 
 
 
398 aa  413  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  53.32 
 
 
388 aa  411  1e-114  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  53.16 
 
 
395 aa  411  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  52.93 
 
 
389 aa  408  1e-113  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  53.48 
 
 
395 aa  401  1e-111  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  51.98 
 
 
384 aa  399  9.999999999999999e-111  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  49.47 
 
 
387 aa  387  1e-106  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  50.26 
 
 
404 aa  380  1e-104  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  50.66 
 
 
390 aa  377  1e-103  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  48.42 
 
 
394 aa  374  1e-102  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
392 aa  372  1e-102  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  48.94 
 
 
391 aa  367  1e-100  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  48.94 
 
 
391 aa  367  1e-100  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  48.94 
 
 
391 aa  367  1e-100  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  47.21 
 
 
388 aa  360  3e-98  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  49.06 
 
 
394 aa  359  4e-98  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  48.01 
 
 
386 aa  355  6.999999999999999e-97  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  43.62 
 
 
380 aa  312  4.999999999999999e-84  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  39.36 
 
 
388 aa  284  2.0000000000000002e-75  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
388 aa  283  2.0000000000000002e-75  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  41.3 
 
 
375 aa  280  2e-74  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
383 aa  280  3e-74  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  40.63 
 
 
377 aa  280  4e-74  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  41.76 
 
 
389 aa  280  4e-74  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  41.94 
 
 
383 aa  278  8e-74  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
383 aa  278  1e-73  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
383 aa  278  1e-73  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  42.05 
 
 
375 aa  277  2e-73  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  41.08 
 
 
394 aa  277  2e-73  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_013440  Hoch_3365  acyl-CoA dehydrogenase domain protein  39.57 
 
 
381 aa  277  2e-73  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.122497 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  40.16 
 
 
382 aa  277  2e-73  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  41.53 
 
 
379 aa  277  2e-73  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  40.21 
 
 
377 aa  277  2e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  40.63 
 
 
377 aa  277  2e-73  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  39.18 
 
 
377 aa  276  3e-73  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  41.13 
 
 
383 aa  276  3e-73  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_007492  Pfl01_2865  Acyl-CoA dehydrogenase-like  40.37 
 
 
383 aa  276  3e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0509295  normal  0.212771 
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
379 aa  276  3e-73  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  40.37 
 
 
377 aa  276  4e-73  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  40.97 
 
 
375 aa  276  6e-73  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_007958  RPD_3301  acyl-CoA dehydrogenase-like  38.81 
 
 
381 aa  276  6e-73  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.168826 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
383 aa  275  7e-73  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  40.7 
 
 
375 aa  275  1.0000000000000001e-72  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  39.47 
 
 
377 aa  275  1.0000000000000001e-72  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  40.37 
 
 
377 aa  275  1.0000000000000001e-72  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  40.37 
 
 
377 aa  275  1.0000000000000001e-72  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  40.37 
 
 
377 aa  274  2.0000000000000002e-72  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  40.22 
 
 
382 aa  274  2.0000000000000002e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.56 
 
 
379 aa  274  2.0000000000000002e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  40.98 
 
 
400 aa  274  2.0000000000000002e-72  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  41.76 
 
 
580 aa  273  3e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  40.05 
 
 
386 aa  273  3e-72  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  40.11 
 
 
390 aa  273  3e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  39.73 
 
 
379 aa  272  7e-72  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  40.38 
 
 
376 aa  271  1e-71  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  39.78 
 
 
390 aa  271  1e-71  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  41.49 
 
 
580 aa  271  1e-71  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
375 aa  271  1e-71  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  38.69 
 
 
379 aa  271  1e-71  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009675  Anae109_4277  acyl-CoA dehydrogenase domain-containing protein  42.09 
 
 
579 aa  270  2e-71  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.943677  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  38.75 
 
 
379 aa  270  2.9999999999999997e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0882  acyl-CoA dehydrogenase domain-containing protein  40.63 
 
 
381 aa  270  2.9999999999999997e-71  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.000390729  normal  0.405813 
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  41.14 
 
 
386 aa  270  2.9999999999999997e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  39.4 
 
 
375 aa  270  4e-71  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  40.7 
 
 
375 aa  270  4e-71  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  39.4 
 
 
375 aa  270  4e-71  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_007760  Adeh_4118  Acyl-CoA dehydrogenase  41.22 
 
 
580 aa  270  4e-71  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.846783  n/a   
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  42.19 
 
 
375 aa  269  5e-71  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  39.51 
 
 
379 aa  269  5e-71  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  42.15 
 
 
380 aa  269  7e-71  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  39.27 
 
 
378 aa  269  7e-71  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
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