More than 300 homologs were found in PanDaTox collection
for query gene YpAngola_0034 on replicon NC_010158
Organism: Yersinia pestis Angola



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_02160  ribonucleotide-diphosphate reductase alpha subunit  64.66 
 
 
761 aa  705    Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1425  ribonucleoside-diphosphate reductase, alpha subunit  64.66 
 
 
761 aa  705    Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010158  YpAngola_0034  putative ribonucleoside-diphosphate reductase, alpha subunit  100 
 
 
548 aa  1136    Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2290  ribonucleotide-diphosphate reductase subunit alpha  63.41 
 
 
762 aa  697    Shewanella baltica OS185  Bacteria  normal  0.0215742  n/a   
 
 
-
 
NC_003910  CPS_2328  ribonucleotide-diphosphate reductase subunit alpha  62.59 
 
 
756 aa  684    Colwellia psychrerythraea 34H  Bacteria  normal  0.333669  n/a   
 
 
-
 
NC_009800  EcHS_A2374  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  705    Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1577  ribonucleotide-diphosphate reductase subunit alpha  61.09 
 
 
758 aa  675    Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.0106565 
 
 
-
 
NC_004347  SO_2415  ribonucleotide-diphosphate reductase subunit alpha  63.98 
 
 
762 aa  699    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C2517  ribonucleotide-diphosphate reductase subunit alpha  64.85 
 
 
761 aa  708    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.299874 
 
 
-
 
NC_009831  Ssed_2306  ribonucleotide-diphosphate reductase subunit alpha  62.41 
 
 
762 aa  682    Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000160913 
 
 
-
 
NC_009997  Sbal195_2407  ribonucleotide-diphosphate reductase subunit alpha  63.23 
 
 
762 aa  696    Shewanella baltica OS195  Bacteria  normal  0.0329855  unclonable  0.0000182182 
 
 
-
 
NC_007204  Psyc_1263  ribonucleotide-diphosphate reductase subunit alpha  59.77 
 
 
758 aa  658    Psychrobacter arcticus 273-4  Bacteria  normal  0.863588  normal 
 
 
-
 
NC_011080  SNSL254_A2462  ribonucleotide-diphosphate reductase subunit alpha  64.85 
 
 
761 aa  707    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.059403 
 
 
-
 
NC_013421  Pecwa_3213  ribonucleotide-diphosphate reductase subunit alpha  65.6 
 
 
761 aa  704    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003109  ribonucleotide reductase of class Ia (aerobic) alpha subunit  62.1 
 
 
760 aa  690    Vibrio sp. Ex25  Bacteria  normal  0.810994  n/a   
 
 
-
 
NC_007520  Tcr_0463  ribonucleotide-diphosphate reductase subunit alpha  62.55 
 
 
760 aa  686    Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00000234846  n/a   
 
 
-
 
NC_011138  MADE_02125  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
773 aa  710    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.117976  n/a   
 
 
-
 
NC_010159  YpAngola_A1313  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
762 aa  704    Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2073  ribonucleotide-diphosphate reductase subunit alpha  63.6 
 
 
762 aa  697    Shewanella putrefaciens CN-32  Bacteria  normal  0.0110634  n/a   
 
 
-
 
NC_009052  Sbal_2059  ribonucleotide-diphosphate reductase subunit alpha  63.41 
 
 
762 aa  697    Shewanella baltica OS155  Bacteria  normal  0.0564291  n/a   
 
 
-
 
NC_010506  Swoo_2303  ribonucleotide-diphosphate reductase subunit alpha  62.66 
 
 
762 aa  690    Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00675695 
 
 
-
 
NC_011205  SeD_A2621  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
780 aa  705    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0895131 
 
 
-
 
NC_007947  Mfla_1223  ribonucleotide-diphosphate reductase subunit alpha  64.91 
 
 
774 aa  708    Methylobacillus flagellatus KT  Bacteria  normal  0.4349  normal 
 
 
-
 
NC_007954  Sden_1952  ribonucleotide-diphosphate reductase subunit alpha  61.73 
 
 
762 aa  684    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3271  ribonucleotide-diphosphate reductase subunit alpha  64.29 
 
 
762 aa  707    Serratia proteamaculans 568  Bacteria  normal  0.838311  normal 
 
 
-
 
NC_010658  SbBS512_E2614  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  705    Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2385  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  705    Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1122  ribonucleotide-diphosphate reductase subunit alpha  59.59 
 
 
758 aa  658    Psychrobacter cryohalolentis K5  Bacteria  normal  0.0415952  normal  0.239593 
 
 
-
 
NC_007984  BCI_0386  ribonucleotide-diphosphate reductase subunit alpha  62.29 
 
 
760 aa  691    Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02733  ribonucleotide-diphosphate reductase subunit alpha  62.48 
 
 
760 aa  692    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0875  ribonucleotide-diphosphate reductase subunit alpha  62.13 
 
 
761 aa  692    Vibrio cholerae O395  Bacteria  normal  0.0454664  n/a   
 
 
-
 
NC_011663  Sbal223_2055  ribonucleotide-diphosphate reductase subunit alpha  63.23 
 
 
762 aa  695    Shewanella baltica OS223  Bacteria  normal  0.574862  unclonable  0.00000000000417711 
 
 
-
 
NC_008228  Patl_2473  ribonucleotide-diphosphate reductase subunit alpha  63.16 
 
 
771 aa  696    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3021  ribonucleotide-diphosphate reductase subunit alpha  64.47 
 
 
762 aa  701    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2848  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
762 aa  704    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1769  ribonucleotide-diphosphate reductase subunit alpha  61.28 
 
 
758 aa  667    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.738921  n/a   
 
 
-
 
NC_012917  PC1_1103  ribonucleotide-diphosphate reductase subunit alpha  65.98 
 
 
761 aa  712    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.649141  n/a   
 
 
-
 
NC_008309  HS_1196  ribonucleotide-diphosphate reductase subunit alpha  63.21 
 
 
756 aa  679    Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1916  ribonucleotide-diphosphate reductase subunit alpha  64.35 
 
 
762 aa  706    Shewanella sp. MR-4  Bacteria  normal  0.626262  hitchhiker  0.000000207141 
 
 
-
 
NC_008322  Shewmr7_2062  ribonucleotide-diphosphate reductase subunit alpha  64.47 
 
 
762 aa  705    Shewanella sp. MR-7  Bacteria  normal  0.0145049  unclonable  0.0000416662 
 
 
-
 
NC_011149  SeAg_B2413  ribonucleotide-diphosphate reductase subunit alpha  64.85 
 
 
761 aa  708    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2133  ribonucleotide-diphosphate reductase subunit alpha  62.97 
 
 
762 aa  685    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2064  ribonucleotide-diphosphate reductase subunit alpha  62.97 
 
 
762 aa  694    Shewanella pealeana ATCC 700345  Bacteria  normal  0.709701  n/a   
 
 
-
 
NC_011353  ECH74115_3368  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  706    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2769  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
762 aa  704    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2801  ribonucleotide-diphosphate reductase subunit alpha  64.29 
 
 
761 aa  701    Enterobacter sp. 638  Bacteria  normal  0.768732  normal  0.31743 
 
 
-
 
NC_009801  EcE24377A_2531  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  705    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1946  ribonucleotide-diphosphate reductase subunit alpha  63.53 
 
 
762 aa  694    Shewanella loihica PV-4  Bacteria  normal  0.726077  normal  0.0192635 
 
 
-
 
NC_011094  SeSA_A2504  ribonucleotide-diphosphate reductase subunit alpha  64.85 
 
 
780 aa  708    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1969  ribonucleotide-diphosphate reductase subunit alpha  64.54 
 
 
762 aa  707    Shewanella sp. ANA-3  Bacteria  normal  0.210427  hitchhiker  0.0000566907 
 
 
-
 
NC_012880  Dd703_1037  ribonucleotide-diphosphate reductase subunit alpha  65.6 
 
 
762 aa  710    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1728  ribonucleotide-diphosphate reductase subunit alpha  63.16 
 
 
782 aa  691    Shewanella amazonensis SB2B  Bacteria  normal  0.742662  normal  0.011326 
 
 
-
 
NC_008709  Ping_1112  ribonucleotide-diphosphate reductase subunit alpha  63.41 
 
 
757 aa  676    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2996  ribonucleotide-diphosphate reductase subunit alpha  62.9 
 
 
754 aa  682    Marinomonas sp. MWYL1  Bacteria  normal  0.558234  normal 
 
 
-
 
NC_010468  EcolC_1417  ribonucleotide-diphosphate reductase subunit alpha  64.66 
 
 
761 aa  705    Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0448641 
 
 
-
 
NC_012892  B21_02119  hypothetical protein  64.66 
 
 
761 aa  705    Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1599  ribonucleoside-diphosphate reductase, alpha subunit  32.33 
 
 
772 aa  277  4e-73  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.0000761375  n/a   
 
 
-
 
NC_014150  Bmur_2704  ribonucleoside-diphosphate reductase, alpha subunit  30.63 
 
 
771 aa  253  8.000000000000001e-66  Brachyspira murdochii DSM 12563  Bacteria  normal  0.343813  n/a   
 
 
-
 
NC_008599  CFF8240_1820  ribonucleotide-diphosphate reductase subunit alpha  29.83 
 
 
791 aa  239  6.999999999999999e-62  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0026  ribonucleotide-diphosphate reductase subunit alpha  28.72 
 
 
789 aa  233  5e-60  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1895  ribonucleotide-diphosphate reductase subunit alpha  28.89 
 
 
791 aa  233  7.000000000000001e-60  Campylobacter concisus 13826  Bacteria  normal  0.594858  n/a   
 
 
-
 
NC_003912  CJE0024  ribonucleotide-diphosphate reductase subunit alpha  28.72 
 
 
789 aa  233  7.000000000000001e-60  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0051  ribonucleotide-diphosphate reductase subunit alpha  28.72 
 
 
789 aa  233  8.000000000000001e-60  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0054  ribonucleoside-diphosphate reductase, alpha subunit  29.06 
 
 
788 aa  228  3e-58  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0025  ribonucleotide-diphosphate reductase subunit alpha  28.38 
 
 
791 aa  228  3e-58  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0597  ribonucleotide-diphosphate reductase subunit alpha  28.84 
 
 
761 aa  227  4e-58  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1699  ribonucleotide-diphosphate reductase subunit alpha  27.91 
 
 
760 aa  226  6e-58  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013171  Apre_1700  ribonucleotide-diphosphate reductase subunit alpha  28.18 
 
 
842 aa  226  8e-58  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.000192568  n/a   
 
 
-
 
NC_009714  CHAB381_1730  ribonucleotide-diphosphate reductase subunit alpha  28.55 
 
 
793 aa  225  1e-57  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4301  ribonucleoside-diphosphate reductase, alpha subunit  30.09 
 
 
769 aa  226  1e-57  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3223  ribonucleotide-diphosphate reductase subunit alpha  27.38 
 
 
764 aa  224  2e-57  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0431  ribonucleoside-diphosphate reductase, alpha subunit  31.18 
 
 
926 aa  223  4.9999999999999996e-57  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1122  ribonucleotide-diphosphate reductase subunit alpha  28.67 
 
 
790 aa  223  4.9999999999999996e-57  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_4359  ribonucleoside-diphosphate reductase, alpha subunit  29.72 
 
 
769 aa  223  8e-57  Cyanothece sp. PCC 8802  Bacteria  normal  0.746758  normal  0.127314 
 
 
-
 
NC_011901  Tgr7_2615  ribonucleotide-diphosphate reductase subunit alpha  30.55 
 
 
971 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.104389  n/a   
 
 
-
 
NC_013889  TK90_1442  ribonucleoside-diphosphate reductase, alpha subunit  30.71 
 
 
964 aa  218  2e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_2096  ribonucleotide-diphosphate reductase subunit alpha  27.01 
 
 
788 aa  217  5.9999999999999996e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0436  ribonucleotide-diphosphate reductase subunit alpha  29.53 
 
 
941 aa  216  7e-55  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1738  ribonucleotide-diphosphate reductase subunit alpha  30.32 
 
 
942 aa  216  9.999999999999999e-55  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_2296  ribonucleotide-diphosphate reductase subunit alpha  28.1 
 
 
787 aa  215  1.9999999999999998e-54  Stenotrophomonas maltophilia R551-3  Bacteria  decreased coverage  0.00177695  normal  0.152718 
 
 
-
 
NC_007510  Bcep18194_A3679  ribonucleotide-diphosphate reductase subunit alpha  30.71 
 
 
998 aa  215  1.9999999999999998e-54  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0564  ribonucleotide-diphosphate reductase subunit alpha  30.23 
 
 
1001 aa  215  1.9999999999999998e-54  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00066464 
 
 
-
 
NC_008060  Bcen_0112  ribonucleotide-diphosphate reductase subunit alpha  30.23 
 
 
1001 aa  215  1.9999999999999998e-54  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290006  n/a   
 
 
-
 
NC_008542  Bcen2424_0594  ribonucleotide-diphosphate reductase subunit alpha  30.23 
 
 
1001 aa  215  1.9999999999999998e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1736  ribonucleotide-diphosphate reductase subunit alpha  29.35 
 
 
941 aa  215  1.9999999999999998e-54  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1634  ribonucleotide-diphosphate reductase subunit alpha  30.73 
 
 
969 aa  214  2.9999999999999995e-54  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0341  ribonucleotide-diphosphate reductase subunit alpha  27.27 
 
 
845 aa  213  4.9999999999999996e-54  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0522  ribonucleotide-diphosphate reductase subunit alpha  30.23 
 
 
999 aa  213  5.999999999999999e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.114808 
 
 
-
 
NC_010084  Bmul_2789  ribonucleotide-diphosphate reductase subunit alpha  31.02 
 
 
995 aa  213  7e-54  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0497  ribonucleotide-diphosphate reductase subunit alpha  30.23 
 
 
999 aa  213  7e-54  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3436  ribonucleotide-diphosphate reductase subunit alpha  30.41 
 
 
1001 aa  213  9e-54  Burkholderia phytofirmans PsJN  Bacteria  normal  0.124151  hitchhiker  0.00141337 
 
 
-
 
NC_006368  lpp1738  ribonucleotide-diphosphate reductase subunit alpha  30.21 
 
 
942 aa  212  1e-53  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A0521  ribonucleotide-diphosphate reductase subunit alpha  30.41 
 
 
1001 aa  212  1e-53  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_02897  ribonucleotide-diphosphate reductase subunit alpha  28.42 
 
 
832 aa  211  2e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2468  ribonucleotide-diphosphate reductase subunit alpha  30.07 
 
 
956 aa  210  6e-53  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0692505  n/a   
 
 
-
 
NC_007347  Reut_A2941  ribonucleotide-diphosphate reductase subunit alpha  30.32 
 
 
979 aa  209  7e-53  Ralstonia eutropha JMP134  Bacteria  normal  0.0976266  n/a   
 
 
-
 
NC_010622  Bphy_2639  ribonucleotide-diphosphate reductase subunit alpha  30.6 
 
 
997 aa  209  7e-53  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0474  ribonucleotide-diphosphate reductase subunit alpha  28.26 
 
 
830 aa  210  7e-53  Xylella fastidiosa M23  Bacteria  normal  0.836355  n/a   
 
 
-
 
NC_008825  Mpe_A3214  ribonucleotide-diphosphate reductase subunit alpha  30.82 
 
 
971 aa  209  9e-53  Methylibium petroleiphilum PM1  Bacteria  normal  0.472198  normal  0.0671441 
 
 
-
 
NC_006348  BMA2510  ribonucleotide-diphosphate reductase subunit alpha  30.18 
 
 
995 aa  209  1e-52  Burkholderia mallei ATCC 23344  Bacteria  normal  0.121944  n/a   
 
 
-
 
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