| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1103 |
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| Symbol | |
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| ID | 8132032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1285738 |
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| End bp | 1288023 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864385 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_003016687 |
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| Protein GI | 253687497 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.649141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA GCTTGCTCGT TACCAAACGC GATGGCAGTA AAGAAAAAAT CAATTTGGAT
AAAATCCACC GCGTCATTAC CTGGGCCGCA GAAGGTTTAC ACAATGTCTC CGTTTCTCAG
GTGGAACTGC GTTCACACAT TCAGTTTTAT GACAGCATCA AAACCTCTGA TATCCATGAG
ACCATCATCA AGGCCGCTGC CGATCTGATC TCCCGCGAAA GCCCGGATTA CCAATATCTG
GCCGCGCGTC TGGCTATCTT CCATCTGCGT AAAAAAGCCT ACGGTCAGTT TGAGCCGCCT
GCCCTGCTGA CTCACGTCAC CAAGATGGTA GAACTGGGCA AGTACGACAA ACACCTGCTG
GAAGACTATA GCCCGGAAGA ATTTGCCCAG ATGGACGCTT TCATCGATCA CTGGCGCGAC
ATGAATTTCT CCTATGCCGC GGTAAAACAG CTGGAAGGGA AATATCTGGT ACAAAACCGC
GTCACCGGTG ATATCTACGA AAGTGCCCAG TTCCTGTACA TTCTGGTCGC GGCCTGCCTG
TTCTCCGGCT ACCCGCGTGA GACGCGTCTG GATTACGTCA AACGTTTTTA TGACGCGATT
TCCACGTTCA AAATCTCCCT GCCGACGCCA ATCATGGCGG GCGTGCGCAC GCCAACGCGT
CAGTTCAGCT CCTGCGTGCT GATCGAGTGC GGCGACAGTC TGGATTCCAT CAATGCGACG
TCCAGCGCAA TCGTGAAATA CGTTTCCCAG CGTGCAGGTA TCGGCATCAA CGCGGGCCGT
ATCCGTGCGC TCGGTAGCCC GATTCGCGGC GGTGAAGCAT TCCACACCGG CTGTATTCCT
TTCTACAAAC ACTTCCAAAC AGCGGTGAAA TCCTGCTCTC AGGGCGGTGT ACGCGGCGGG
GCTGCCACAC TGTTCTATCC GCTGTGGCAT CTGGAAGTAG AAAGCCTGTT AGTGTTGAAA
AACAACCGTG GTGTAGAAGG CAACCGCGTT CGTCACCTCG ATTACGGCGT ACAGCTGAAC
AAACTGATGT ATCAGCGCCT GGTAAAAGGT GAAGACATTA CGTTGTTCAG CCCGTCCGAC
GTGCCGGGGC TGTATGACGC GTTCTTCGCC GATCAGGATG AGTTCGAGCG CCTGTATGTG
CAATATGAGC AGGATGACAG CATCCGCAAA CAGCGCATCA AAGCCGTTGA GCTGTTCTCT
CTGATGATGC AGGAACGTGC TTCCACCGGT CGTATCTATA TTCAGAACGT TGACCACTGC
AATACGCACA GCCCGTTCGA TCCGCAGATT GCGCCCGTTC GCCAGTCCAA CCTGTGTCTG
GAAATCGCGC TGCCGACCAA ACCGCTGGAC GACGTGAATG ATGAAAACGG TGAAATCGCG
CTGTGTACGC TGTCTGCTTT CAACCTCGGC GCCATCAACA GTCTGGACGA TCTCGAAGAG
CTAGCGACGC TGGCGGTACG CGCGCTGGAT GCCCTGCTGG ACTATCAGGA TTACCCGATC
ACAGCAGCAG AACGTGGCGC GATGGGTCGC CGTACGCTGG GAATTGGCGT GATCAACTTC
GCTTACTATC TGGCGAAAAA CGGCGTGCGT TATTCTGACG GCAGCGCCAA TAACCTGACA
CACAGAACGT TTGAAGCGAT CCAATACTAC CTGTTGAAAG CTTCTAACGT GCTGGCTCGC
GAGCAAGGCG CCTGCCCGTG GTTCAATGAA ACCACCTATT CGCAGGGTAT TCTGCCTATC
GATACCTATA AGCGCGATTT GGATGCAATC TGTAACGAAC CGCTGCATCT CGACTGGGAA
GCGCTGCGTA ACGACATCAA AGAATACGGG CTGCGTAACT CCACGCTGTC GGCCCTGATG
CCGTCTGAAA CCTCGTCTCA GATCTCCAAC GCAACCAACG GTATTGAACC ACCGCGCGGT
CACATCAGCG TCAAAGCATC CAAAGACGGT ATTCTGCGTC AGGTTGTGCC GGAGTACGAA
ACGCTGAAAG ACGCTTACGA ACTGCTGTGG GAAATGCCGA GCAATGACGG CTACCTGCAA
CTGGTTGGTC TGATGCAGAA GTTTGTCGAT CAGGCGATTT CTTCTAACAC CAACTACGAT
CCGTCGCGTT TCCCATCCGG CAAAGTGCCG ATGAAGCAAC TGCTGAAAGA TCTGGTCACG
GCTTACAAAT TCGGCGTGAA AACGCTGTAT TACCAAAACA CCCGTGACGG TGCTGAAGAC
GTACAAGACG ACCTGCTGGC AGAACCGCAG GACGACGGTT GCGAAGGCGG CGCGTGTAAG
ATTTAA
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| Protein sequence | MNQSLLVTKR DGSKEKINLD KIHRVITWAA EGLHNVSVSQ VELRSHIQFY DSIKTSDIHE
TIIKAAADLI SRESPDYQYL AARLAIFHLR KKAYGQFEPP ALLTHVTKMV ELGKYDKHLL
EDYSPEEFAQ MDAFIDHWRD MNFSYAAVKQ LEGKYLVQNR VTGDIYESAQ FLYILVAACL
FSGYPRETRL DYVKRFYDAI STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT
SSAIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCIP FYKHFQTAVK SCSQGGVRGG
AATLFYPLWH LEVESLLVLK NNRGVEGNRV RHLDYGVQLN KLMYQRLVKG EDITLFSPSD
VPGLYDAFFA DQDEFERLYV QYEQDDSIRK QRIKAVELFS LMMQERASTG RIYIQNVDHC
NTHSPFDPQI APVRQSNLCL EIALPTKPLD DVNDENGEIA LCTLSAFNLG AINSLDDLEE
LATLAVRALD ALLDYQDYPI TAAERGAMGR RTLGIGVINF AYYLAKNGVR YSDGSANNLT
HRTFEAIQYY LLKASNVLAR EQGACPWFNE TTYSQGILPI DTYKRDLDAI CNEPLHLDWE
ALRNDIKEYG LRNSTLSALM PSETSSQISN ATNGIEPPRG HISVKASKDG ILRQVVPEYE
TLKDAYELLW EMPSNDGYLQ LVGLMQKFVD QAISSNTNYD PSRFPSGKVP MKQLLKDLVT
AYKFGVKTLY YQNTRDGAED VQDDLLAEPQ DDGCEGGACK I
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