| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2473 |
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| Symbol | |
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| ID | 4174227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3005327 |
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| End bp | 3007642 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055489 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_662043 |
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| Protein GI | 109898788 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AACTCTTCGT TACTAAGCGA ACTGGCGAGC GCGAAAGCAT TGACCTCGAA
AAAATCCACA AAGTTATTAC TTGGGCAGCT AAAGGCCTTA ATAATGTGTC TGTATCTCAG
GTGGAAATTA AAGCGCATAT TCAGTTCTAC GACGGTATCA AGACAGAAGA TATTCATGAG
ACGCTGATCC GCTCAGCGGC CGATCTTATT TCAACAGACG CACCAGATTA TCAATACTTA
GCAGCACGTT TGGCTATCTT CCATTTACGT AAGAAAGCCT ATGGGCAGTT TGAGCCCCCA
GCGCTTTTCG CCCATGTTAC CAACATGGTC GAGATGCAAA AATATGATCA ACATTTGTTG
AGTGATTACA GCGAAGCTGA ATTTCAAGAA ATGGATGATT ATATTGACCA CTGGCGTGAC
ATGGACTTTA GCTACGCCGC AGTCAAGCAG CTAGAAGGTA AATACCTTGT TCAAAACCGG
GTAACAGGCG AAATTTACGA GAGTGCCCAA TTTCTATATA TCTTGGTAGC AGCATGTTTG
TTTGCTGATT ACCCGAAAGA TTCGCGCATG GAATACATCA AGCGCTTCTA TGATGCGACG
TCGAAATTCA AAATCTCACT GCCTACGCCA ATTATGGCCG GCGTGCGTAC ACCTACAAGG
CAGTTCAGCT CATGTGTATT GATTGAAGCT GGCGATAGCC TTGATTCAAT TAACGCGACA
GCCAGTGCCA TTGTTAAGTA CGTGAGCCAG CGCGCCGGTA TCGGTGTCAA CGCAGGGCGC
ATACGTGCTC TTGGTAGCCC TATTCGCGGC GGCGAAGCAT TCCATACGGG TTGTATTCCA
TTCTATAAGT ATTTCCAAAC TGCCGTTAAA AGTTGTTCAC AAGGCGGCGT TCGCGGCGGT
GCAGCAACAC TTTTCTACCC ACTTTGGCAT ATGGAAGTGG AATCACTTCT AGTATTGAAA
AATAACCGTG GTGTAGAAGA AAACCGCGTT CGTCATTTGG ATTACGGCGT GCAATTTAAT
AAGTTGATGT ATCAGCGCTT GATTAAAGAT CAGCACATTA GCTTGTTTAG CCCATCTGAC
GTACCTGGTT TGTACGATGC GTTCTTTGCT GACCAACCTA AATTTGAAGA GCTATACGTT
AAGTACGAGC AAGATGACAG CATCCGCAAG ACCCAAATCA AAGCAGTAGA GTTGTTTAGC
TTGTTCATGC AAGAGCGTGC TAGTACCGGC CGTATCTATC TTCAGAACGT GGATCACTGC
AACACGCACA GTCCTTTCGA CCCGAAAGTT GCACCGATCC GTCAAAGCAA CCTGTGTCTT
GAAATCGCTC TACCGACTAA ACCCCTTGAG CACGTTAATG ACGAAAACGG CGAAATTGCC
CTTTGTACAT TATCAGCGTT TAACCTAGGT GCCATTGAAA GCTTAGAAGA CTTCGCAGAA
ATGGCTGACC TCGCCGTACG TGCGCTTGAC AACCTACTCG ATTATCAAGA TTACCCCGTA
CCCGCAGCGT ACAATGCCAC TATGGGGCGT CGTACATTGG GTATAGGTGT AATCAATTTT
GCCTACTACC TTGCTAAGAA CGGCGTTAAA TACTCAGATG GCAGTGCCAA CGGCCTCATT
CACCGAACAT TTGAAGCCAT GCAATATCAC TTGATGCGTG CCTCTTGTAA CCTAGCAAAA
GAGAAAGGCG CATGTCCTAA GTTTGATGAG ACCACCTACT CTCAAGGGAT CATGCCAATT
GATACCTACA AGAAAGACTT AGACAAAATT TGTAACGAGC CACTGCATTG TGACTGGGAC
AGTCTACGTG CTGACATCAA GCAATACGGT CTACGTAACA GTACCTTGTC TGCCTTGATG
CCGTCTGAAA CATCATCACA GATTTCAAAT GCCACCAATG GCATTGAGCC ACCACGCGGC
CACATCAGTG TTAAATCCAG TAAAGATGGA GTGTTGAAGC AAGTGGTGCC TGAGTACGAA
TTGTTGAAAG ACAAGTACGA ATTGTTGTGG GATTTACCGT CTAACGATGG TTACTTACAG
TTAACCGGTA TTATGCAAAA GTTTGTTGAT CAAACAATTT CAGCTAACAC CAGTTACGAC
CCGAACAAAT ACGACGGTGG CAAAGTCCCC ATGAAGTTAT TGTTGAAAGA CTTGCTTACC
GCTTATCAGC TAGGCGTAAA AACCTTGTAC TACCACAACA CTCGTGATGG CGCAGCAGAT
ACATCACAGC AAGAGCTGAA ATCAACCCAG TTCGTTCCAC AAGAAGCAGT CGTTGAAGAA
GACGACGATT GTGCTGGCGG TGCGTGTAAA ATTTAA
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| Protein sequence | MNNKLFVTKR TGERESIDLE KIHKVITWAA KGLNNVSVSQ VEIKAHIQFY DGIKTEDIHE
TLIRSAADLI STDAPDYQYL AARLAIFHLR KKAYGQFEPP ALFAHVTNMV EMQKYDQHLL
SDYSEAEFQE MDDYIDHWRD MDFSYAAVKQ LEGKYLVQNR VTGEIYESAQ FLYILVAACL
FADYPKDSRM EYIKRFYDAT SKFKISLPTP IMAGVRTPTR QFSSCVLIEA GDSLDSINAT
ASAIVKYVSQ RAGIGVNAGR IRALGSPIRG GEAFHTGCIP FYKYFQTAVK SCSQGGVRGG
AATLFYPLWH MEVESLLVLK NNRGVEENRV RHLDYGVQFN KLMYQRLIKD QHISLFSPSD
VPGLYDAFFA DQPKFEELYV KYEQDDSIRK TQIKAVELFS LFMQERASTG RIYLQNVDHC
NTHSPFDPKV APIRQSNLCL EIALPTKPLE HVNDENGEIA LCTLSAFNLG AIESLEDFAE
MADLAVRALD NLLDYQDYPV PAAYNATMGR RTLGIGVINF AYYLAKNGVK YSDGSANGLI
HRTFEAMQYH LMRASCNLAK EKGACPKFDE TTYSQGIMPI DTYKKDLDKI CNEPLHCDWD
SLRADIKQYG LRNSTLSALM PSETSSQISN ATNGIEPPRG HISVKSSKDG VLKQVVPEYE
LLKDKYELLW DLPSNDGYLQ LTGIMQKFVD QTISANTSYD PNKYDGGKVP MKLLLKDLLT
AYQLGVKTLY YHNTRDGAAD TSQQELKSTQ FVPQEAVVEE DDDCAGGACK I
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