| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1952 |
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| Symbol | |
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| ID | 4018441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2314632 |
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| End bp | 2316920 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955974 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_562958 |
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| Protein GI | 91793307 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA ATATGACAGT CACCAAGCGA AGTGGCGAAC GTGAATCCAT CGATTTGGAT
AAAATCCACC GCGTAATTAC TTGGTCAACC AAGGGTTTAA AAAACGTCTC GGTTTCAGAA
GTCGAACTGA GATCCCACTT GCAGTTTTTT GACGGCATTC CAACAGAAGC CATTCATGAA
ACTATCATTA AAGCTGCGGC CGATCTTATC TCTCCAGATT CGCCTGATTA CCAGTTTGTA
GCGGCCCGTT TAGCCGTGTT CCATTTGCGT AAAAAAGCCT ATGGCCAATT TGAGCCACCA
AGCCTGGTTG ATCACGTTAC CCGCTTGGTT GAGCTTGGCA AATACGACAA GAATATCCTC
ACCGACTACA CCCGTGAAGA ACTTGAAGTG ATGGATACTT ATATCGATCA CTGGCGCGAC
ATGAACTTCT CCTATGCTGC GGTTAAGCAG TTAGAAGGCA AGTATCTAGT GCAAAATCGT
GTCACCCATG AAGTGTATGA GAGCGCTCAG TTCCTCTACA TCTTAGTGGC GGCCTGTTTG
TTTGCTCGCT ATCCGGCTGA AACACGCCTT AAGTACATCA AAGACTTCTA TGATGCGACC
TCAAACTTTA AGATCTCCTT GCCGACACCT ATCATGGCAG GCGTGCGCAC CCCGACACGT
CAATTTAGCT CATGTGTGTT AATCGAGTGT GATGACAGCC TAGATTCAAT CAATGCCACG
GCTTCTTCTA TTGTAAAATA CGTTAGCCAG CGCGCTGGCA TTGGCATTAA CGCCGGCCGT
ATTCGCGCCC TAGGCAGCCC AATTCGCGGT GGTGAAGCTT TCCACACAGG TTGCTTACCC
TTCTATAAGT ATTTTCAAAC TGCGGTTAAG TCGTGCTCTC AAGGCGGCGT ACGTGGCGGT
GCTGCCACCC TCTTCTACCC AATATGGCAT TTAGAAGTTG AATCTCTGCT GGTACTTAAG
AATAACCGCG GCGTCGATGA TAACCGTGTG CGTCACTTAG ATTATGGCGT GCAGTTAAAC
AAGTTGATGT ATCAGCGTTT GATTAAAGGT CAAGACATCA GCCTATTTAG CCCATCTGAT
GTACCAGGCA TGTATGATGC ATTCTTCGCC GACCAAGTGG AATTTGAGCG CCTGTATTTA
CAGTATGAAC AAGACACTCG TATTCGCCGC AAGACCTTAA AGGCTGTTGA ATTATTTTCA
CTCATGATGC AAGAACGTGC TTCAACGGGC CGTATTTACA TTCAGAACGT GGATCACTGC
AACACTCACA GCCCGTTTGA CCCAAGCGTA GCGCCGATTA AACAATCTAA CCTTTGTTTA
GAAATCGCCT TGCCGACCAA ACCGCTTAAA AATATTGACG ACCCTGAAGG TGAAATCGCA
CTCTGTACGC TTTCAGCTCT AAACTTAGGT GCAATCAAAG ACTTAAGTGA GCTAGAACCC
TTAGCGGATT TAGCGGTTCG CGCCCTTGAT AACCTGTTAG ATTATCAAGA TTACCCGATT
ATTTCGGCTC AGCTGGGTTC GATGAATCGC CGTACTTTAG GCATAGGCGT GATTAACTTC
GCCAACTACT TGGCCAAAAA TGGCAAAAAG TACTCGGATG GTTCAGCTAA CAATTTAACT
CACAGGACAT TCGAAGCCAT ACAGTTCTAT CTGTTAAAAG CCTCGATGAA CTTGGCTAAA
GAGCAAGGGG CCTGTCCGTT ATTTAACGAG ACCACTTATT CAAAAGGCAT CTTGCCCATT
GACACTTATA AGCGGGATTT AGACGCCATA TGCAGTGAGC CTTTGCACAT GGATTGGGAA
GCGCTGCGTA AAGACATACT AGAACACGGC TTACGTAACT CGACCTTGTC TGCACTCATG
CCGTCTGAGA CATCATCGCA AATCTCTAAC GCCACTAACG GTATCGAGCC ACCTCGTGGA
CTCATCAGCG TTAAGGCCAG TAAAGATGGT CAGTTGAAGC AAGTGGTACC GGATTTTGAT
GAACTGCGTG ACAGCTATGA ATTGTTATGG AACATGCCAA ACAATGATGG TTACTTGCAG
CTGGTGGGTA TCATGCAAAA GTTTGTCGAC CAAGCCATTT CGGCCAACAC TAACTATGAC
CCAAGCCGAT TTGAAGGCCG TAAAGTGCCG ATGCAGACCT TGCTTAAAGA CTTGCTCGGC
GCCTACAAAC TTGGGGTGAA GACACTGTAT TACCATAACA CTCGCGATGG CGCGTCCGAT
CAGTTTGATG AGATCACCGC TGTGATTGAA GAAGATGATG ATTGTGCCGG CGGTGCATGT
AAGATTTAA
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| Protein sequence | MNTNMTVTKR SGERESIDLD KIHRVITWST KGLKNVSVSE VELRSHLQFF DGIPTEAIHE
TIIKAAADLI SPDSPDYQFV AARLAVFHLR KKAYGQFEPP SLVDHVTRLV ELGKYDKNIL
TDYTREELEV MDTYIDHWRD MNFSYAAVKQ LEGKYLVQNR VTHEVYESAQ FLYILVAACL
FARYPAETRL KYIKDFYDAT SNFKISLPTP IMAGVRTPTR QFSSCVLIEC DDSLDSINAT
ASSIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCLP FYKYFQTAVK SCSQGGVRGG
AATLFYPIWH LEVESLLVLK NNRGVDDNRV RHLDYGVQLN KLMYQRLIKG QDISLFSPSD
VPGMYDAFFA DQVEFERLYL QYEQDTRIRR KTLKAVELFS LMMQERASTG RIYIQNVDHC
NTHSPFDPSV APIKQSNLCL EIALPTKPLK NIDDPEGEIA LCTLSALNLG AIKDLSELEP
LADLAVRALD NLLDYQDYPI ISAQLGSMNR RTLGIGVINF ANYLAKNGKK YSDGSANNLT
HRTFEAIQFY LLKASMNLAK EQGACPLFNE TTYSKGILPI DTYKRDLDAI CSEPLHMDWE
ALRKDILEHG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKASKDG QLKQVVPDFD
ELRDSYELLW NMPNNDGYLQ LVGIMQKFVD QAISANTNYD PSRFEGRKVP MQTLLKDLLG
AYKLGVKTLY YHNTRDGASD QFDEITAVIE EDDDCAGGAC KI
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