| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0522 |
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| Symbol | |
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| ID | 6178461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 589195 |
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| End bp | 592194 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680270 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001807235 |
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| Protein GI | 172059583 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.114808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA CCGACAACGC GACGTCCCAG TACGAGAGCG CCTCGAGCCG TCCGCTCGGC
GGGACCGAAC AGGGCGCGAA GGCGCTCGCG CCGCAGGCCA CGTTCGCCGA CTACAAGGTG
ATCCGCCGCA ACGGCAGTGT GGTGTCGTTC GAGCCTTCGA AGATCGCGAT CGCGGTGACC
AAGGCTTTCC TGGCCGTCAA CGGCGGGCAG GGCGCGGCAT CGGCGCGTGT GCGCGAGCAG
GTCGAGCAGC TCACGCACAG CGTCGTGCGC GCGCTCGTGC GCAGCCGTCC GAACGGCGGT
ACGTTCCATA TCGAAGACAT CCAGGATCAG GTCGAACTCG CGCTGATGCG CGGCGGCGAG
CACAACGTCG CGCGTGCGTA CGTGCTGTAT CGCGAGAAGC GCCACCTCGA GCGCCAGCAT
GCGGGCGAAG AAGCGGCCGC AGCGGGCGGC GAGGCGAGCG CGGGCATCAA CGTCGTCGAC
AACGGCGTCA CGCGCCCGCT CGACATGAAC GCGCTGCGCG AGCTGATCGT GTCGGCATGC
GCCGGTCTCG GCGCTGCGGT TAACCCTGAG CCGATCGTCG CGGAGACGGT GAAGAACCTG
TATGACGGCG TGCCGATGAG CCAGGTCTAC GACTCGGCGA TCCTCGCGGC GCGCACGATG
ATCGAAAAGG ATCCGGCGTA CAGCCAGGTC ACGGCCCGCA TCCTGCTGCA CACGATCCGC
CGCGAAATCC TCGGCGAGGA AGTGCTCCAG GCCGAGATGG CGACCCGCTA CACTGAATAC
TTCCCGCAGT TCCTGAAGCG CGGCGTCGAT GCCGGCCTGC TCGACGACAA GCTGCTGCAG
TTCGACCTGA AGCGTCTCGG CGAAGCGCTC GACGCGAACC GCGACCTGCA GTTCGGCTAC
CTCGGCCTGC AGACGCTGTA CGACCGCTAC TTCCTGCACG TCGAAGGCAC CCGCATCGAA
ATGCCGCAGG CATTCTTCAT GCGCGTCGCG ATGGGCCTGT CGTTGAACGA GATCGACCGC
GAAACGCGCG CGATCGAGTT CTACAACGTG CTGTCGAGCT TCGACTTCAT GAGCTCGACG
CCGACGCTGT TCAACTCGGG CACGCACCGC TCGCAGCTGT CGTCGTGCTA CCTGACGACG
GTCGCGGACG ACCTCGACGG CATCTATGAA GCGCTGAAGG AAAACGCGCT GCTGTCGAAG
TTCGCCGGCG GTCTCGGCAA CGACTGGACC CGCGTGCGTG CGCTCGGCTC GCATATCAAG
GGCACGAACG GCAAGTCGCA AGGCGTGGTG CCGTTCCTGA AGGTCGTCAA CGACACGGCC
GTCGCGGTCA ACCAGGGCGG CAAGCGCAAG GGCGCGGTGT GCGCGTACCT CGAATCGTGG
CACCTCGACA TCGAGGAGTT CCTCGAGCTG CGAAAGAACA CCGGCGACGA CCGCCGCCGC
ACGCACGACA TGAACACGGC GAACTGGATT CCCGACCTGT TCATGAAGCG CGTGATGGAA
GGCGCCGACT GGACGCTGTT CTCGCCGTCG ACCTGCCCGG ATCTCCACGA CAAGTTCGGC
GCGGAATTCG AGGCGGCTTA CACGGCTTAC GAAGACAAGG TCGCGCGCGG CGAGATCAAG
CTGTTCAAGA AGATCCCGGC GCAGCAACTC TGGCGCAAGA TGCTCGGCAT GCTGTTCGAA
ACGGGCCACC CGTGGATCAC GTTCAAGGAT CCGTGCAACG TGCGTTCGCC GCAGCAGCAC
GTCGGCGTCG TCCATTCGTC GAACCTGTGC ACGGAAATCA CGCTGAACAC GAGCGACACC
GAAATCGCGG TGTGCAACCT GGGCTCGGTG AACCTCGTCG CCCACCTGGT GAAGCAGGCC
GACGGCAGCT ACGCGCTCGA CCAAGACAAG CTCAAGCGCA CGATCAGCGT CGCGATGCGC
ATGCTCGACA ACGTGATCGA CATCAACTAC TACGCGGTGC CGAAGGCGCG TAACTCGAAC
CTGAAGCACC GTCCGGTCGG CATGGGCATC ATGGGCTTCC AGGACTGCCT GCACCTGCTG
CGCACGCCGT ACGCGTCGGA AGCGGCGGTC GAGTTCGCCG ATCGCTCGAT GGAAGCGGTC
TGCTACTACG CGTACTACGC GTCGACCGAG CTGGCTGAGG AACGCGGCCG CTACTCGAGC
TACCGCGGCT CACTGTGGGA TCGCGGCATC CTCCCGCAGG ACACGCTGAA GCTGCTGACG
GAAGCACGCG GCGGTTACGT CGAGGTCGAC ACGTCGGAGT CGCTCGACTG GACGACGCTG
CGCTCGCGGA TCGCGGCACA CGGCATGCGC AACTCGAACT GCGTCGCGAT CGCGCCGACG
GCAACGATCT CGAACATCAT CGGCGTGTCG GCGTGCATCG AGCCGACCTT CCAGAACCTG
TACGTGAAGT CGAACCTGTC GGGCGAGTTC ACGGTGGTCA ACGAGTACCT CGTTCGCGAC
CTGAAGGAAC GCGGCCTGTG GGACGAAGTG ATGGTCGCCG ACCTGAAGTA CTTCGACGGC
ATGCTGTCGC GCATCGACCG CATCCCGGCC GACCTCCGCG CGATCTACGC GACCGCGTTC
GAAGTCGACC CGACGTGGCT GGTCGAAGCG GCATCGCGTC GCCAGAAGTG GATCGACCAG
GCGCAGTCGC TGAACATCTA CATGGGCGGC GCGTCGGGCA AGAAGCTCGA CGAGGTCTAC
AAGCTCGCGT GGCTGCGCGG TCTGAAGACG ACCTACTACC TCCGCACGAT GGCGGCGACG
CACGTCGAGA AGTCGACGGT CGCGCACGGC GCGCTGAACG CGGTGCCGAC GGGCGGTGCG
GGCGGCTCGA GCAGCGGCGG CGCGCAAGGC GCGGCAGGCG GCTTCGGTGC GGCAGGTGGC
GATGCATCGT CGGGCGCGGT CAATGCGGCA GCGGCGCTGG CGCCGGTCGA AGCAGACGGT
CCGGTATGCA CGATGCGTCC GGGCGATGCG GGTTTCGACG AGTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTTDNATSQ YESASSRPLG GTEQGAKALA PQATFADYKV IRRNGSVVSF EPSKIAIAVT
KAFLAVNGGQ GAASARVREQ VEQLTHSVVR ALVRSRPNGG TFHIEDIQDQ VELALMRGGE
HNVARAYVLY REKRHLERQH AGEEAAAAGG EASAGINVVD NGVTRPLDMN ALRELIVSAC
AGLGAAVNPE PIVAETVKNL YDGVPMSQVY DSAILAARTM IEKDPAYSQV TARILLHTIR
REILGEEVLQ AEMATRYTEY FPQFLKRGVD AGLLDDKLLQ FDLKRLGEAL DANRDLQFGY
LGLQTLYDRY FLHVEGTRIE MPQAFFMRVA MGLSLNEIDR ETRAIEFYNV LSSFDFMSST
PTLFNSGTHR SQLSSCYLTT VADDLDGIYE ALKENALLSK FAGGLGNDWT RVRALGSHIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLESW HLDIEEFLEL RKNTGDDRRR
THDMNTANWI PDLFMKRVME GADWTLFSPS TCPDLHDKFG AEFEAAYTAY EDKVARGEIK
LFKKIPAQQL WRKMLGMLFE TGHPWITFKD PCNVRSPQQH VGVVHSSNLC TEITLNTSDT
EIAVCNLGSV NLVAHLVKQA DGSYALDQDK LKRTISVAMR MLDNVIDINY YAVPKARNSN
LKHRPVGMGI MGFQDCLHLL RTPYASEAAV EFADRSMEAV CYYAYYASTE LAEERGRYSS
YRGSLWDRGI LPQDTLKLLT EARGGYVEVD TSESLDWTTL RSRIAAHGMR NSNCVAIAPT
ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNEYLVRD LKERGLWDEV MVADLKYFDG
MLSRIDRIPA DLRAIYATAF EVDPTWLVEA ASRRQKWIDQ AQSLNIYMGG ASGKKLDEVY
KLAWLRGLKT TYYLRTMAAT HVEKSTVAHG ALNAVPTGGA GGSSSGGAQG AAGGFGAAGG
DASSGAVNAA AALAPVEADG PVCTMRPGDA GFDECEACQ
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