| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3214 |
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| Symbol | |
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| ID | 4786553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3416173 |
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| End bp | 3419088 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640091787 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001022402 |
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| Protein GI | 124268398 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.472198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0671441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA TCAGCTCCAG CGTTCCGGCC GCCGCTCTTG CCGGCGGCGC GCTCGCCGCC
ACCGCAGTTT CGCGGGCGGC TCCCGGCAGC TCGGCCTATG CCGGCTACCA GATCATCCGG
CGCAACGGAG CGGTGGTGGC GTTCGAGCCG AACAAGATCG CCGTGGCCTT GATGAAGGCC
TTCCTGGCCG TGCACGGCAC GCAGGGTGCG GCCTCGGCCA GCGTCCGCGA GATGGTCGAT
GGTCTGACCG AATCGGTGGT GCGCGCGCTG CTGCGTTCAC GTCCGGGCGG CGGCACCTTC
CACATCGAGG ACGTCCAGGA TGCGGTTGAA CTTGGGCTGA TGCGCGGCGG GCACCACGAG
ATCGCCCGCG CCTATGTGCT GTACCGCGAG CGCCGCGCTC AGGAGCGCGC CAAGCAGGGC
GCTGCGCCGG TGACGCCGGC CGTCGCACTG CACGTGATCG ATCGCGGCCA GCGCGTGCCG
CTCGACACCG GCCGGTTGCA GGCCCTGGTG GAATCGGCCT GTGCCAATCT CGGCAGCGAG
GTGCAGGCTG CGCCGATCCT CGCCGAGACC CAGCGGAACC TGTACGACGG CGTGCCGATC
GACGAGGTCT ACAAGGCCGC CATCCTGGCC GCCCGCACGC TGATCGAGAA GGACCCGGCC
TACACGCGGG CGACTGCGCG GCTGCTGCTG CACACCATCC GCCGCGAAAT CCTCGGCGGC
GAGGTGCTCC ACGAGGAAAT GCAGCAGCGC TATGCCGACT ACTTCCCGGG CTTCATCAAG
CAGGGTGTCG AGGCCGAACT GCTCGACGAG CGGCTGATGC AGTACGACCT GCGCCGCCTG
GGCGAGGCGC TCAAGGCCGA CCGCGACCTG CAGTTCGACT ACCTCGGCCT GCAGACGCTG
TACGACCGCT ACTTCCTGCA CGTTCGCAAG GCGCGCATCG AATTGCCGCA GGCCTTCTTC
ATGCGCGTGG CCATGGGCCT GGCGCTGAAC GAGGTCGACC GCGAGGCGCG GGCAATCGAG
TTCTACGAGG TGCTGTCGAG CTTCGACTTC ATGTCGAGCA CGCCGACGCT GTTCAACAGC
GGCACGCGCC GCTCGCAGCT GTCGAGCTGC TACCTCACGA CCGTGGCCGA CGACCTGGAC
GGCATCTACG AGGCGATCAA GGAGAACGCG TTGCTCTCCA AGTTCGCCGG TGGTCTGGGC
AACGACTGGA CACCGGTGCG TGCGCTCGGC AGTCACATCA AGGGCACCAA CGGCGAGTCG
CAGGGCGTCG TGCCATTCCT GAAGGTCGTC AACGACACCG CGGTGGCCGT CAACCAGGGC
GGCAAGCGCA AGGGGGCGGT CTGTGCCTAC CTGGAAACCT GGCACCTCGA CATCGAGGAG
TTCCTGGAGC TGCGCAAGAA CACCGGCGAC GACCGCCGTC GCACCCACGA CATGAACACC
GCGAACTGGA TCCCCGATCT GTTCATGCGG CGCGTCATCG AAGGCGGCGA CTGGACGCTG
TTCTCGCCGT CCACCTGCCC GGACCTGCAT GACAAGTTCG GCATCGCTTT CGAGCAGGCG
TACACCGCAT ACGAACAGAA GGCCGATCGA GGCGAGCTCA AGCTCTACAA GCGCGTGCCG
GCCAAGGACC TGTGGCGCAA GATGCTGTCG ATGCTGTTCG AGACCGGGCA TCCGTGGATC
ACGTTCAAGG ATGCCTGCAA CGTCCGCTCG CCCCAGCAGC ATGTCGGCGT GGTGCACTCT
TCGAACCTGT GCACCGAGAT CACGCTCAAC ACCAACGGCA GCGAGATCGC GGTCTGCAAC
CTCGGCTCGG TCAACCTCGC CCAGCACCTG ATGCACGGCG CCGAGGGTCT GGAGATCGAC
CACGCCAAGC TGAGGAAGAC GGTGTCGACG GCGATGCGCA TGCTCGACAA CGTGATCGAC
ATCAACTACT ACGCGGTCAA GAAGGCACGC GACTCCAATC TGCGCCACCG CCCGGTCGGC
CTGGGCGTGA TGGGCTTCCA GGACAGCCTC TACCAACTGC GCATTGCCTA CGCTTCGCAG
CAGGCGGTCG AGTACGCCGA CCGTTCGATG GAGGCGGTGT GCTACCACGC CTATTGGGCC
TCGACCGAAC TGGCCGAGGA GCGCGGCCGC TATTCCAGTT ACAAGGGTTC GCTGTGGGAC
CGCGGCATCC TGCCGATCGA CAGCCTGGAT CTGCTGGCCG AGCAGCGCGG CGGCTACGTC
GACGTCGACC GTTCCACCTC GCTCGACTGG GACGCGCTGC GCGCGCGCAT CCAGCAGCAC
GGCATGCGCA ATTCCAACTG CGTGGCGATC GCTCCGACCG CGACCATCTC CAACATCATC
GGCGTGGACG CGTCGATCGA GCCGTCGTTC AGCAACCTGT CGGTCAAGTC CAACCTGTCG
GGCGAGTTCA CGGTCATCAA CGAGTACCTC GTGCGTGATC TGAAGAAGCT CGGTCTGTGG
GACGACGTGA TGGTGATGGA CCTCAAGCAC TTCGATGGTT CGCTGCGTCG CATCGACCGC
GTGCCAGAGG AACTGAAGTC GCTCTACGCG ACGGCCTTCG AGGTCGAGCC GACCTGGCTG
GTCGAGGCGG CGGCACGCCG CCAGAAATGG ATCGACCAGG CGCAGAGCCT CAACATCTAC
ATGGCGGGCG CGTCCGGCAA GAAGCTCGAC GACACCTACA AGCTCGCGTG GCAGCGTGGC
CTGAAGACCA CCTACTACCT GCGCACGGTG GGCGCGACGC ATGCCGAGAA ATCGACGGTG
AAGGCGGGGC ACCTGAATGC CGTGTCGAGC GGCAGCGGTG GTGTCGATGC CGTGGCTGCC
GCAGCGCAAG CGCAGTTCGA TGCTGCGAGC AGCGTGCCTG CCACCGACAT GAAGTTCTGC
GCGATCGACG ACCCGACGTG CGAGGCCTGT CAGTGA
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| Protein sequence | MQSISSSVPA AALAGGALAA TAVSRAAPGS SAYAGYQIIR RNGAVVAFEP NKIAVALMKA
FLAVHGTQGA ASASVREMVD GLTESVVRAL LRSRPGGGTF HIEDVQDAVE LGLMRGGHHE
IARAYVLYRE RRAQERAKQG AAPVTPAVAL HVIDRGQRVP LDTGRLQALV ESACANLGSE
VQAAPILAET QRNLYDGVPI DEVYKAAILA ARTLIEKDPA YTRATARLLL HTIRREILGG
EVLHEEMQQR YADYFPGFIK QGVEAELLDE RLMQYDLRRL GEALKADRDL QFDYLGLQTL
YDRYFLHVRK ARIELPQAFF MRVAMGLALN EVDREARAIE FYEVLSSFDF MSSTPTLFNS
GTRRSQLSSC YLTTVADDLD GIYEAIKENA LLSKFAGGLG NDWTPVRALG SHIKGTNGES
QGVVPFLKVV NDTAVAVNQG GKRKGAVCAY LETWHLDIEE FLELRKNTGD DRRRTHDMNT
ANWIPDLFMR RVIEGGDWTL FSPSTCPDLH DKFGIAFEQA YTAYEQKADR GELKLYKRVP
AKDLWRKMLS MLFETGHPWI TFKDACNVRS PQQHVGVVHS SNLCTEITLN TNGSEIAVCN
LGSVNLAQHL MHGAEGLEID HAKLRKTVST AMRMLDNVID INYYAVKKAR DSNLRHRPVG
LGVMGFQDSL YQLRIAYASQ QAVEYADRSM EAVCYHAYWA STELAEERGR YSSYKGSLWD
RGILPIDSLD LLAEQRGGYV DVDRSTSLDW DALRARIQQH GMRNSNCVAI APTATISNII
GVDASIEPSF SNLSVKSNLS GEFTVINEYL VRDLKKLGLW DDVMVMDLKH FDGSLRRIDR
VPEELKSLYA TAFEVEPTWL VEAAARRQKW IDQAQSLNIY MAGASGKKLD DTYKLAWQRG
LKTTYYLRTV GATHAEKSTV KAGHLNAVSS GSGGVDAVAA AAQAQFDAAS SVPATDMKFC
AIDDPTCEAC Q
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