| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2133 |
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| Symbol | |
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| ID | 4279045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2539219 |
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| End bp | 2541507 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134922 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_750817 |
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| Protein GI | 114563304 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA ATATGACAGT CACTAAACGC AGTGGCGAAC GTGAATCTAT CGATTTAGAT
AAAATTCATC GCGTGATCAC TTGGGCAGCC AAGGGATTAA AAAACGTCTC AGTATCTGAA
GTAGAACTTC GATCTCATCT GCAGTTTTTT GATGGCATTC CAACAGAAGC CATTCATGAA
ACGATCATTA AAGCCGCGGC TGACTTGATC TCTCCTGAGT CACCTGATTA CCAATTTGTG
GCTGCCCGCT TAGCGGTGTT CCATTTACGT AAAAAAGCAT TTGGTCAATT TGAGCCACCA
ACGTTATATG ACCATGTCAC CAAGTTAGTT GAAATTGGTA AATATGACAT GCATATCATG
GCTGATTACA GCCGTGAAGA ATTAGACATC CTCGACACCT ATATCGATCA CTGGCGTGAC
TTGAACTTCT CTTATGCCGC GGTAAAGCAA CTTGAAGGTA AATACCTAGT TCAAAACCGT
GTAACGCATG AAGTGTACGA AAGCGCCCAG TTTTTATATA TTTTAGTGGC TGCATGTTTG
TTTGCCCGTT ACCCAAAAGA AATCCGTTTG AAGTACATTA AAGACTTCTA TGACGCGACG
TCTCTGTTTA AGATTTCTTT ACCAACGCCA ATCATGGCCG GTGTGCGTAC ACCTACACGT
CAGTTCAGCT CTTGTGTATT AATTGAGTGT GATGACAGCT TAGATTCAAT CAATGCAACC
GCATCTTCTA TCGTTAAATA CGTTAGCCAA CGTGCTGGTA TTGGTATTAA CGCTGGTCGT
ATTCGAGCCC TTGGTAGCCC TATTCGTGGC GGTGAAGCTT TCCACACTGG TTGTTTACCT
TTTTATAAGT ATTTCCAAAC TGCGGTGAAG TCTTGTTCTC AAGGCGGCGT ACGTGGCGGC
GCAGCAACCC TTTTCTATCC TTTATGGCAT CTAGAAGTTG AATCGTTACT AGTCCTTAAA
AACAACCGTG GTGTTGACGA CAACCGTGTA CGTCATCTTG ACTACGGTGT GCAGTTAAAC
AAATTAATGT ACCAACGTTT GATTAAAGGC GAATACATCA GTTTATTCAG CCCATCAGAC
GTGCCAGGTC TTTACGATGC ATTCTTTGAA GATCAAGCTG AGTTTGAACG TTTATACCTT
CAGTATGAGC AAGACAGCAA TATCCGCAAA AAACAAATTA AAGCGGTTGA ACTGTTTTCA
TTGATGATGC AAGAACGTGC TTCTACTGGC CGTATCTACA TTCAAAACGT CGATCACTGT
AATACTCACA GCCCGTTTGA CTCTAAAGTT GCGCCAATTA AGCAATCTAA CTTATGTTTA
GAAATTGCTT TGCCAACTAA GCCACTGACT AATATTGATG ATCCTGACGG TGAAATCGCG
CTATGTACCT TGTCAGCACT TAACTTAGGC GCAATTAAAG ATTTATCTGA ACTTGAGCCA
TTAGCTGATT TAGCCGTACG TGCCCTAGAT AACTTACTTG ATTACCAAGA TTACCCAATC
AAAGCCGCAC AAACGAGTTC AATGAACCGT CGTACCTTAG GTATTGGTGT GATTAACTTT
GCTAACTATT TAGCTAAAAA CGGTAAAAAG TATTCAGACG GTTCAGCCAA TAACCTAACT
CATAAGACTT TTGAAGCAAT TCAGTTTTAT TTACTGAAAG CGTCAATGAA CTTAGCTAAA
GAGCAAGGTG CATGTCCGTT ATTCCACGAG ACTACGTATT CGAAAGGTAT TTTACCTATC
GATACTTACA AGCGTGATTT AGACAAGATT TGCGACGAGC CATTGCACAT GGACTGGGAA
AGCTTGCGTA GCGACATTAA GCAGTACGGT TTACGTAACT CAACCTTGTC TGCGCTAATG
CCGTCTGAAA CCTCATCGCA AATTTCAAAT GCGACCAATG GTATCGAGCC TCCACGCGGC
TTAATCAGCG TTAAAGCCAG TAAAGATGGT CAGTTAAAGC AAGTCGTTCC TGATTTTGAA
TTACTGAAAG ATAAGTATGA ACTACTGTGG AATATGCCAA ACAACGATGG TTATATCCAA
CTTGTTGGGT TAATGCAGAA ATTTATCGAC CAAGCTATTT CGGCCAACAC CAATTATGAT
CCTAGCCGTT TTGAAGGCGG TCGTGTACCG ATGCAAACGT TGTTAAAAGA CTTGTTAAGC
GTATACAAAC TGGGCATTAA AACATTGTAT TATCATAATA CTCGCGACGG TGCTTCGGAT
CAGTTTGACG ACATTATTGC TGTCGAAGAA GAAGACGATG GCTGTGGTGG CGGTGCGTGT
AAGATATAA
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| Protein sequence | MNSNMTVTKR SGERESIDLD KIHRVITWAA KGLKNVSVSE VELRSHLQFF DGIPTEAIHE
TIIKAAADLI SPESPDYQFV AARLAVFHLR KKAFGQFEPP TLYDHVTKLV EIGKYDMHIM
ADYSREELDI LDTYIDHWRD LNFSYAAVKQ LEGKYLVQNR VTHEVYESAQ FLYILVAACL
FARYPKEIRL KYIKDFYDAT SLFKISLPTP IMAGVRTPTR QFSSCVLIEC DDSLDSINAT
ASSIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCLP FYKYFQTAVK SCSQGGVRGG
AATLFYPLWH LEVESLLVLK NNRGVDDNRV RHLDYGVQLN KLMYQRLIKG EYISLFSPSD
VPGLYDAFFE DQAEFERLYL QYEQDSNIRK KQIKAVELFS LMMQERASTG RIYIQNVDHC
NTHSPFDSKV APIKQSNLCL EIALPTKPLT NIDDPDGEIA LCTLSALNLG AIKDLSELEP
LADLAVRALD NLLDYQDYPI KAAQTSSMNR RTLGIGVINF ANYLAKNGKK YSDGSANNLT
HKTFEAIQFY LLKASMNLAK EQGACPLFHE TTYSKGILPI DTYKRDLDKI CDEPLHMDWE
SLRSDIKQYG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKASKDG QLKQVVPDFE
LLKDKYELLW NMPNNDGYIQ LVGLMQKFID QAISANTNYD PSRFEGGRVP MQTLLKDLLS
VYKLGIKTLY YHNTRDGASD QFDDIIAVEE EDDGCGGGAC KI
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