| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3223 |
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| Symbol | |
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| ID | 5742001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3927564 |
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| End bp | 3929858 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294323 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001560316 |
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| Protein GI | 160881348 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA TGATTAAAAA GCGTAATCAA ACCTATGAGC CGTTATGTGT GGAAAAGACG
AAGAGAATGA TTGCATTTGC TTGTGAGGGT TTGGAAGGGT GTGACCCAAT TGAGCTGGAA
CTGGATGCGA GGATCCAGTT TGTGGACGGA ATGAGTACGA AAGAAATTCA AAAGATGTTA
GTTCAAACAG CGATTGAAAA AGTAATTCAT ACTAAGAAAG ATGAATTTGG TAATATCATG
CGTGAAACAC ATACCAATTG GCAGTATGTT GCAGCGAGAT TGTTTGTATT TGATTTGTAT
AAAGAAGCAG CAATAGAACG TCATTATAAG CATTTTGGAT ATGGGGATTT TTTAAATCTT
GTAAATTCGT TGGTGGAGGA AGAACTTTAC GGATCATATC TAACCGATGC GTATACTCAA
TTAGAGATAA AAGAGTTAGG AGCATATATT AAGCCAGAAA GAGATTATTT GTTTAATTAT
GAAGGTGTAA AACTGTTATC TGATCGTTAT CTGGTGAAGG GACTTAAAAA GGAAGTTTTT
GAACTTCCTC AAGAGAGATT TATGGTAATT GCGATGCATC TTGCTATTCC GGAAGAAAAG
GCAAAGCGTA TGGAATACGC GAAGAAGTTT TATGATTTAC TTAGTAGTCT TCAGATGACG
GTTGCGACCC CTACTCTTGC CAATGCAGGT ACTCCTTTTT ATCAGCTAAG CAGCTGTTTT
ATCTCGGTAG TAGGAGATAA TCTATGGTCT ATTTATGATG TAAATCAGAA GTTTTCTAGT
GTGAGTAAGC ATGGGGGTGC GCTTGGTATC TATGTAGGCA AAATCCGTGC TTTAAATAGT
GAGATACGAG GTAACAAAAA TGCTTCCGGA GGAGTAATTC CATGGGTACG ACTCTATAAT
GATACTGCAA TTGCAGTGGA TCAATTAGGA AGGAGAAAGG GAGGAGCTAC CATTACTCTT
GATATTTGGC ATGCTGACCT ATATGATTTT CTTGACCTTA AAACAAACAA TGGAGATGAT
CGAAGAAAGG CTCATGATAT ATTTACCGCA CTTAGTGTAC CGAACCTATT CATGGAACGG
TTAGAGCGAC GAGAAGAATG GTCATTATTT GATCCTTATC TGGTAAATAA GGTAATGGGA
TTTTCTTTGG AGGATAGCTA TGATGAAGTG GCAGAGAACG AGTTTACAAA GCGCTATCTT
GCATGTGAAG AATGTAAAGA GTTACCAAGG ATTACAGTTC CTGCACTTGA AGTGATGAAA
CGGATTATGA AGAGTGCCGT TGAGACGGGA GCACCATTTA TCTTCTTCCG TGATACGGTA
AATCAGGCAA ATCCGAATAA ACACGCTGGA ATGATTTATT CCTCGAACCT ATGTCAGGAG
ATAACACAAA ACATGAGCGA AAGTGAGCTA CGAGAAGAAT TGATTCAAGA TGAATCTGGT
GCTAAAGTGA TTATTACAAA GATTAAGCCA GGGGATATGG TAACCTGTAA TCTAAATTCA
ATTAGTCTTG GTAGGATTGA AAAAAAAGAT TTAGCAGTTA ATATTCCGTT ACAAATTCGT
ATGCTTGATA ATGTCATTAC TTTAAATCAG ACACCGGTAG CAGAAGCCCG TATTACCAGT
GATAAATACC GTGCAATCGG ACTTGGGACA AGTGGATACC ATCATTACCT TGTAAATCAC
GGTATTGGCT GGGAGACACA AAAACATCTT GAGGAAGCGG ATGACTTATT TGAAGAAATA
GCATATCAAG CCATCAAAGC CTCGATGGAA CTTGCAAAGG AAAAGGGAAA ATATGAAGCT
TTTCATGGCT CCGAGTGGGA AACAGGTGAG TATTTTAAGC GCAGAGATTA TACCAGTGAC
CGTTGGTTAG CACTAAGTAA AGAGGTAGCA GAGCATGGTA TGAGAAATGG CTACATTACA
GCAGTTGCGC CTACGGGAAG TACCTCTAAC ATTGCAAATA CCTCAGCGGG TATTGATCCT
ATCTTTAAGA GATATTTTAT TGAAGAAAAG AAGGGAAGTT TTATACCAAA AACTGCTCCA
GATTTAAATA CATCGAATTT CTGGCTATAC AAAGAAGCAC ATACGATTGA TCAGCAATTT
AGTATTCGTG CATGTGGAAT ACGCCAACGC CACATTGATC AGTCTCAGTC GTTTAATCTA
TATATCACGC CAGAATATAA GGCAATTGAT ATTTTAAATT TATATATGGA AGCTTGGAGA
AAAGGTCTAA AGACGATTTA CTATGTTAGA AATCAGTCGC TTGAGATGGA TGAATGTACA
AGCTGTTCTA GTTAA
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| Protein sequence | MDIMIKKRNQ TYEPLCVEKT KRMIAFACEG LEGCDPIELE LDARIQFVDG MSTKEIQKML
VQTAIEKVIH TKKDEFGNIM RETHTNWQYV AARLFVFDLY KEAAIERHYK HFGYGDFLNL
VNSLVEEELY GSYLTDAYTQ LEIKELGAYI KPERDYLFNY EGVKLLSDRY LVKGLKKEVF
ELPQERFMVI AMHLAIPEEK AKRMEYAKKF YDLLSSLQMT VATPTLANAG TPFYQLSSCF
ISVVGDNLWS IYDVNQKFSS VSKHGGALGI YVGKIRALNS EIRGNKNASG GVIPWVRLYN
DTAIAVDQLG RRKGGATITL DIWHADLYDF LDLKTNNGDD RRKAHDIFTA LSVPNLFMER
LERREEWSLF DPYLVNKVMG FSLEDSYDEV AENEFTKRYL ACEECKELPR ITVPALEVMK
RIMKSAVETG APFIFFRDTV NQANPNKHAG MIYSSNLCQE ITQNMSESEL REELIQDESG
AKVIITKIKP GDMVTCNLNS ISLGRIEKKD LAVNIPLQIR MLDNVITLNQ TPVAEARITS
DKYRAIGLGT SGYHHYLVNH GIGWETQKHL EEADDLFEEI AYQAIKASME LAKEKGKYEA
FHGSEWETGE YFKRRDYTSD RWLALSKEVA EHGMRNGYIT AVAPTGSTSN IANTSAGIDP
IFKRYFIEEK KGSFIPKTAP DLNTSNFWLY KEAHTIDQQF SIRACGIRQR HIDQSQSFNL
YITPEYKAID ILNLYMEAWR KGLKTIYYVR NQSLEMDECT SCSS
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