| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2415 |
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| Symbol | nrdA |
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| ID | 1170130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2520877 |
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| End bp | 2523165 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344248 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | NP_718005 |
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| Protein GI | 24373962 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA ATATGACAGT TACAAAACGT TGTGGTGCCC GTGAGACGAT CGATCTCGAC
AAAATACACC GCGTAATTAC TTGGGCAGCC AAGGGATTAA AAAACGTTTC TGTTTCTGAA
GTTGAACTTC GCACGCATTT ACAGTTTTTC GATGGGATCC CAACCGAAGC TATCCACGAA
ACGATCATCA AATCGGCAGC GGATTTAATT TCCCCAGAGT CACCCGATTA TCAGTTTCTG
GCTGCGCGCT TAGCCGTATT CCATTTACGT AAGAAGGCCT TTGGTCAGTT CGAGCCGCCC
AAGTTATATG ATCATGTGAC TAAGCTGGTG GAGCTGGGTA AGTATGATAT GCACATTCTG
CAAGACTACA CCCGCGAAGA GCTCGATATC ATGGATACTT ATATCGACCA TTGGCGCGAT
ATGAATTTCT CCTACGCAGC CGTTAAACAG CTCGAAGGCA AGTATCTGGT TCAAAATCGC
GTGACCCACG AGATTTATGA GAGCGCCCAG TTCCTTTATA TTCTGGTGGC GGCTTGTTTG
TTTGCCCGTT ATCCAAAGGA AACGCGCCTG CAGTACGTTA AAGATTTTTA CGACGCGGTA
TCAACCTTTA AGATTTCACT GCCGACCCCC ATCATGGCAG GCGTTCGTAC ACCTACACGT
CAGTTCAGCT CATGCGTGCT GATTGAATGT GGCGATAGCT TGGATTCGAT CAATGCGACC
GCATCGTCTA TCGTGAAATA CGTGAGCCAA CGCGCTGGTA TCGGTATCAA CGCTGGTCGT
ATCCGTGCGT TAGGTAGCCC AATCCGTGGC GGCGAAGCCT TCCATACAGG TTGCTTACCT
TTCTACAAGT ATTTCCAAAC CGCGGTGAAG TCTTGCTCGC AAGGCGGTGT GCGCGGCGGT
GCAGCCACCC TCTTCTATCC TATTTGGCAT TTAGAAGTTG AATCTCTGCT GGTACTGAAA
AACAACCGTG GCGTTGAAGA TAACCGTATC CGTCATTTAG ACTATGGCGT GCAACTGAAT
AAACTGATGT ATCAACGTCT GATCAAAGGC GAAAGCATTA GCCTATTCAG CCCATCTGAC
GTACCCGGTC TTTACGATGC CTTCTTTGAA GATCAAGCCG AATTTGAGCG TTTGTATCTG
CAATATGAGC AAGACAGCAG TATTCGTAAG AAGACATTAA AAGCGGTGGA TCTGTTCTCA
CTGATGATGC AAGAACGTGC TTCAACGGGC CGTATCTACA TTCAAAACGT GGATCACTGT
AACACCCACA GTCCATTTGA CTCAAAAGTT GCACCGATCA GACAGTCTAA CCTCTGCCTC
GAAATCGCGC TGCCAACCAA GCCATTGAAT AACATTGACG ATCCAAATGG TGAAATCGCC
CTTTGTACAC TCTCGGCATT AAATCTGGGG ACAATTACCG ATTTAGCGGA ACTGGAGCCA
TTAGCTGATT TAGCCGTGCG AGCCTTAGAT AACCTGCTGG ATTACCAAGA TTATCCAATT
AAAGCTGCAC AAATTTCATC GATGAACCGT CGTACCTTAG GGATTGGCGT CATCAACTTT
GCTAACTACT TAGCGAAGAA TGGCATGAAG TACTCCGATG GCAGCGCGAA CAACCTGACA
CACAAGACCT TTGAAGCGAT TCAGTTTTAT CTGCTCAAAG CATCTATGAA TCTCGCTAAA
GAAAAAGGCG CATGTCCATT ATTTAATGAG ACCACTTACG CCCAAGGTAT TTTACCTATC
GATACCTACA AACGTGACCT AGATAAGATT TGCAGTGAGC CATTGCATTT AGACTGGGAA
GCACTGCGCA GCGACATTAA AGAGTACGGA TTACGTAACT CGACACTGTC GGCACTGATG
CCGTCTGAAA CCTCATCACA GATCTCAAAC GCCACCAACG GTATCGAACC GCCACGGGGT
TTAATCAGTG TGAAGGCCAG TAAAGATGGC CAGTTAAAGC AAGTGGTACC TGATTTCGAC
ACCTTAAAGA ATAACTATGA ACTGTTGTGG CAAATGCCAA GCAACGAAGG TTACTTACAG
CTTGTGGGTA TCATGCAAAA GTTCGTTGAT CAAGCGATTT CGGCTAACAC AAATTATGAT
CCAGCGCGTT TTGAGGGCCG TAAAGTCCCG ATGCAGACCC TGCTAAAAGA CTTACTCAAT
GCCTATAAGT TAGGTGTAAA AACGCTGTAC TACCATAACA CTCGCGATGG TGCATCGGAT
CAACACGATG ACATTACCAA CATAGAGAAA GAAGATGACG GCTGTGCTGG CGGCGCTTGC
AAAATCTAA
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| Protein sequence | MNSNMTVTKR CGARETIDLD KIHRVITWAA KGLKNVSVSE VELRTHLQFF DGIPTEAIHE
TIIKSAADLI SPESPDYQFL AARLAVFHLR KKAFGQFEPP KLYDHVTKLV ELGKYDMHIL
QDYTREELDI MDTYIDHWRD MNFSYAAVKQ LEGKYLVQNR VTHEIYESAQ FLYILVAACL
FARYPKETRL QYVKDFYDAV STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT
ASSIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCLP FYKYFQTAVK SCSQGGVRGG
AATLFYPIWH LEVESLLVLK NNRGVEDNRI RHLDYGVQLN KLMYQRLIKG ESISLFSPSD
VPGLYDAFFE DQAEFERLYL QYEQDSSIRK KTLKAVDLFS LMMQERASTG RIYIQNVDHC
NTHSPFDSKV APIRQSNLCL EIALPTKPLN NIDDPNGEIA LCTLSALNLG TITDLAELEP
LADLAVRALD NLLDYQDYPI KAAQISSMNR RTLGIGVINF ANYLAKNGMK YSDGSANNLT
HKTFEAIQFY LLKASMNLAK EKGACPLFNE TTYAQGILPI DTYKRDLDKI CSEPLHLDWE
ALRSDIKEYG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKASKDG QLKQVVPDFD
TLKNNYELLW QMPSNEGYLQ LVGIMQKFVD QAISANTNYD PARFEGRKVP MQTLLKDLLN
AYKLGVKTLY YHNTRDGASD QHDDITNIEK EDDGCAGGAC KI
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