| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1969 |
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| Symbol | |
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| ID | 4479423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2343289 |
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| End bp | 2345577 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726551 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_869606 |
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| Protein GI | 117920414 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.210427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000566907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGCA ATATGACAGT CACAAAACGC TGTGGTGCAC GTGAGACAAT CGATCTCGAT
AAGATACACC GCGTAATTAC TTGGGCAGCC AAGGGATTAA AAAACGTTTC TGTTTCTGAA
GTTGAACTTC GCACGCATTT ACAGTTTTTC GACGGGATCC CAACCGAAGC TATCCACGAA
ACGATCATCA AATCTGCGGC GGATTTAATT TCCCCAGAAT CACCGGATTA TCAGTTTCTG
GCTGCGCGCT TAGCCGTATT CCATTTACGT AAGAAGGCCT TTGGTCAGTT CGAGCCGCCA
AAGTTATACG ACCATGTGAC TAAACTGGTC GAGCTTGGCA AGTATGATAT GCATATTCTG
CAGGATTACA CCCGCGAAGA ACTCGATATT ATGGACAGCT ATATCGACCA CTGGCGCGAT
ATGAACTTCT CCTACGCGGC AGTAAAACAG CTCGAAGGTA AGTATCTGGT ACAAAACCGT
GTGACCCACG AGATCTACGA GAGCGCCCAG TTCCTCTATA TTCTAGTGGC AGCCTGTTTG
TTTGCCCGTT ATCCAAAAGA AACGCGCCTG CAATATGTTA AAGATTTTTA CGACGCGGTA
TCGACCTTTA AGATTTCGCT GCCAACGCCA ATCATGGCAG GTGTACGCAC GCCAACACGT
CAATTCAGTT CATGCGTACT GATTGAATGT GGCGACAGCT TAGATTCTAT CAACGCGACC
GCCTCTTCTA TCGTGAAGTA TGTGAGCCAA CGCGCAGGTA TCGGTATCAA CGCGGGTCGT
ATCCGTGCAT TAGGTAGCCC AATCCGTGGC GGCGAAGCCT TCCACACCGG TTGCTTACCT
TTCTACAAGT ATTTCCAAAC GGCGGTAAAA TCTTGCTCGC AAGGCGGCGT TCGTGGTGGT
GCAGCGACCC TCTTCTACCC CATTTGGCAC TTAGAAGTAG AATCGCTGCT GGTACTGAAA
AACAACCGCG GTGTTGAAGA TAACCGTATT CGCCACTTAG ACTACGGCGT GCAGCTCAAC
AAGCTGATGT ACCAACGTCT GATCAAAGGC GAAAACATTA GCCTGTTCAG CCCATCTGAC
GTACCAGGTC TTTACGATGC CTTCTTCGAA GATCAAGACG AATTCGAACG TCTGTACCTG
CAATATGAGC AAGACAGCAG CATTCGTAAG AAGACATTGA AAGCAGTTGA ACTGTTCTCA
TTGATGATGC AAGAGCGTGC TTCAACGGGC CGTATCTACA TCCAAAACGT CGACCACTGT
AATACCCACA GTCCGTTCGA CTCGAAAGTC GCTCCGATCA GACAATCTAA CCTTTGTCTT
GAAATCGCGC TGCCGACTAA GCCGTTGAAC AACATTGACG ATCCAAACGG TGAAATCGCG
CTGTGTACAC TGTCAGCGTT AAACTTAGGT GCAATCAAAA ACTTAGCCGA GCTTGAGCCA
TTAGCCGATT TAGCGGTACG TGCACTGGAT AACCTACTGG ATTACCAAGA TTATCCAATC
AAAGCGGCCG AAATTTCATC GATGAACCGT CGTACCTTAG GTATTGGTGT TATCAACTTT
GCGAACTACT TAGCGAAGAA TGGCATGAAG TACTCCGATG GTAGCGCGAA CAACCTGACT
CACAAGACCT TTGAAGCGAT TCAGTTCTAT CTGCTCAAGG CGTCAATGAA TCTGGCGAAA
GAGAAAGGTG CGTGCCCATT ATTTAATGAG ACCACTTACG CTCAAGGTAT TTTACCTATC
GATACCTACA AACGTGATTT AGATAAGATT TGCAGCGAGC CATTGCATTT AGACTGGGAA
ACACTGCGCC AAGACATCAA ACAGCACGGT TTACGTAACT CGACCCTGTC TGCATTGATG
CCGTCTGAGA CTTCATCACA GATCTCAAAC GCGACCAACG GTATCGAACC GCCACGGGGT
TTGATCAGCG TTAAAGCGAG TAAAGATGGC CAGTTAAAGC AAGTGGTGCC TGATTTTGAT
GAGCTGAAAT ACAACTACGA GCTGCTATGG CAAATGCCAA GCAACGAAGG TTACTTACAG
CTCGTGGGTA TCATGCAAAA ATTCGTTGAC CAAGCGATTT CGGCCAACAC TAACTATGAC
CCAACGCGTT TCGAAGGCCG TAAGGTTCCG ATGCAGACTC TGCTGAAAGA CTTACTCAAT
GCCTATAAGT TAGGTGTAAA AACGCTGTAC TACCATAACA CTCGCGATGG TGCATCGGAT
CAACACGATG ACATTACCAA CATAGAGAAA GAAGATGACG GCTGTGCTGG CGGCGCCTGC
AAAATCTAA
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| Protein sequence | MNSNMTVTKR CGARETIDLD KIHRVITWAA KGLKNVSVSE VELRTHLQFF DGIPTEAIHE
TIIKSAADLI SPESPDYQFL AARLAVFHLR KKAFGQFEPP KLYDHVTKLV ELGKYDMHIL
QDYTREELDI MDSYIDHWRD MNFSYAAVKQ LEGKYLVQNR VTHEIYESAQ FLYILVAACL
FARYPKETRL QYVKDFYDAV STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT
ASSIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCLP FYKYFQTAVK SCSQGGVRGG
AATLFYPIWH LEVESLLVLK NNRGVEDNRI RHLDYGVQLN KLMYQRLIKG ENISLFSPSD
VPGLYDAFFE DQDEFERLYL QYEQDSSIRK KTLKAVELFS LMMQERASTG RIYIQNVDHC
NTHSPFDSKV APIRQSNLCL EIALPTKPLN NIDDPNGEIA LCTLSALNLG AIKNLAELEP
LADLAVRALD NLLDYQDYPI KAAEISSMNR RTLGIGVINF ANYLAKNGMK YSDGSANNLT
HKTFEAIQFY LLKASMNLAK EKGACPLFNE TTYAQGILPI DTYKRDLDKI CSEPLHLDWE
TLRQDIKQHG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKASKDG QLKQVVPDFD
ELKYNYELLW QMPSNEGYLQ LVGIMQKFVD QAISANTNYD PTRFEGRKVP MQTLLKDLLN
AYKLGVKTLY YHNTRDGASD QHDDITNIEK EDDGCAGGAC KI
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