| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1769 |
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| Symbol | nrdA |
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| ID | 6989353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1883610 |
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| End bp | 1885886 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380078 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_002263177 |
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| Protein GI | 209695248 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.738921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAC AGCTTACCGT TACTAAGCGA AATGGCACCA CAGAAAAGAT CAATTTAGAA
AAGATCCATA AAGTGATCAC CTGGGCTGCT GAAAATCTGG ATAATGTTTC TGTTTCACAA
GTTGAAATGA AATCCCACAT CCAGTTTTAT GAAGGCATGA AGACATCTGA CATTCATGAA
ACCATCATCA AAGCAGCGGC CGACCTTATC TCTGAAGAAA CGCCAGATTA CCAATACCTT
GCTGCTCGTT TGTCTGTTTT TCACCTTCGT AAAAAAGCGT ATGGCCAATT TGAGCCACCA
ACGCTATTTA AGCACGTAAA TAACCTGATC GAATTAGGTA AATACGATAA GCACATTACA
GAAGATTACA CGGAAGCAGA ATTCGACTTG ATGGATCAAA TGATCGATCA CAGCCGTGAT
ATGGACTTCT CTTACGCTGC TGTTAAACAA CTAGAAGGGA AATACTTCGT ACAAAACCGC
GTAACGGGCG CGATCTACGA AAGTGCTCAA TTCCTTTATA TTTTAGTTGC GGCGTGCTTA
TTTGCTAAAT ACCCAAAAGA TACTCGTCTG GATTACATTC AACGTTTCTA CGACGCGACC
TCTAAATTTA AAATATCGTT ACCAACACCG ATTATGTCTG GTGTTCGTAC GCCAACACGT
CAATTTAGTT CATGCGTTCT AATTGAATGT GATGATAGCC TTGATTCAAT CAATGCAACG
GCAGGCTCTA TTGTACGTTA CGTATCACAA CGTGCAGGTA TTGGCATCAA TGCCGGTCGT
ATTCGTGCAC TTGGCTCTGA AATTCGTGAC GGTGAAGCAT TCCATACTGG TTGTATCCCA
TTCTATAAAT ACTTCCAAAC AGCAGTAAAA TGTTGTTCTC AAGGTGGTGT TCGTGGCGGC
GCTGCAACCT TGTTTTACCC TATTTGGCAC CGCGAAGTAG AATCACTATT GGTTCTTAAA
AATAACCGTG GCGTTGAAGA AAACCGTGTT CGTCATATGG ATTACGGCGT TCAAATTAAC
AAGCTTATGT ATACTCGCCT AATTAAAGGG GAACACATCA GCTTATTTTC ACCTTCTGAT
GTTCCTGGTA TGTACGAGGC TTTCTTTGCT GACCAAGTAG AGTTCGAGCG CCTGTATCTT
AAATACGAAC AAGACACATC AATTAAGCGT GAAACAATTA AAGCGATTGA GCTGTTCTCA
TTACTAATGC AAGAACGTGC TTCAACAGGC CGTATCTACA TTCAAAACGT CGATCACTGT
AATACACACA GCCCATTCGA CCCAAGTGTT GCTCCAATTC GCCAATCTAA CTTATGTTTA
GAAATTGCTC TACCAACTAA GCCACTAACA CACGTTAATG ACGAAGAAGG TGAAATTGCA
TTATGTACTC TGTCTGCATT TAACCTAGGT GCGATAGAGA AATTAGAAGA GCTTGAAGAA
TTAGCGGAAT TAGCGGTACG TGCTCTTGAT GCACTTCTTG ATTACCAAGA CTACCCATTA
CCAGCAGCTT ACAAATCAAC AATGAACCGT CGTACGTTAG GTGTAGGAGT TATTAACTAC
GCTTATTACC TAGCGAAAAA TGGCGTTAAG TACTCTGATG GCAGTGCAAA CGGATTAACG
CATAAAACGT TTGAAGCAAT TCAATTCTAT CTTCTAAAAG CATCTGTAAA TTTAGCGAAA
GAACAAGGCG CTTGCCCTGC TTTCAATGAA ACTACCTATG CTCAAGGTAT CCTACCTATC
GATTCTTACA AAAAAGACAT CGATAATATA TGTAGTGAAG AATTACATTT AGATTGGGAA
GAATTACGTT CAGACATTAA AACTCACGGT TTACGCAACT CAACGTTATC GGCATTGATG
CCGTCTGAAA CCTCTTCACA AATCTCAAAT GCAACGAATG GCATTGAACC ACCACGTGGT
TTTGTATCAA TCAAAGCATC AAAAGATGGT ATTTTAAAAC AAGTTGTTCC TGATTATTTG
AACTTAAAAG ATAATTATGA GCTACTTTGG AACATCGGCT CTAACGATGG CTACTTGCAA
TTAGTCGGTA TCATGCAGAA ATTTGTCGAC CAAGCAATTT CAGCGAATAC AAACTATGAT
CCAAACAGTC AGCCAAATGG CAAAGTACCA ATGAAGCTAT TGCTTAAAGA CTTGTTAACA
GCTTATAAGC TAGGTCTAAA AACATTGTAC TACCATAACA CTCGTGATGG CGCGAGCGAT
TCACAAGGCG ATTTAGCTCA AGATGATGAT TGTGAAGGCG GCGGCTGTAA AATATAA
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| Protein sequence | MTPQLTVTKR NGTTEKINLE KIHKVITWAA ENLDNVSVSQ VEMKSHIQFY EGMKTSDIHE
TIIKAAADLI SEETPDYQYL AARLSVFHLR KKAYGQFEPP TLFKHVNNLI ELGKYDKHIT
EDYTEAEFDL MDQMIDHSRD MDFSYAAVKQ LEGKYFVQNR VTGAIYESAQ FLYILVAACL
FAKYPKDTRL DYIQRFYDAT SKFKISLPTP IMSGVRTPTR QFSSCVLIEC DDSLDSINAT
AGSIVRYVSQ RAGIGINAGR IRALGSEIRD GEAFHTGCIP FYKYFQTAVK CCSQGGVRGG
AATLFYPIWH REVESLLVLK NNRGVEENRV RHMDYGVQIN KLMYTRLIKG EHISLFSPSD
VPGMYEAFFA DQVEFERLYL KYEQDTSIKR ETIKAIELFS LLMQERASTG RIYIQNVDHC
NTHSPFDPSV APIRQSNLCL EIALPTKPLT HVNDEEGEIA LCTLSAFNLG AIEKLEELEE
LAELAVRALD ALLDYQDYPL PAAYKSTMNR RTLGVGVINY AYYLAKNGVK YSDGSANGLT
HKTFEAIQFY LLKASVNLAK EQGACPAFNE TTYAQGILPI DSYKKDIDNI CSEELHLDWE
ELRSDIKTHG LRNSTLSALM PSETSSQISN ATNGIEPPRG FVSIKASKDG ILKQVVPDYL
NLKDNYELLW NIGSNDGYLQ LVGIMQKFVD QAISANTNYD PNSQPNGKVP MKLLLKDLLT
AYKLGLKTLY YHNTRDGASD SQGDLAQDDD CEGGGCKI
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