| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003109 |
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| Symbol | |
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| ID | 8556842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1677459 |
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| End bp | 1679741 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406204 |
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| Product | ribonucleotide reductase of class Ia (aerobic) alpha subunit |
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| Protein accession | YP_003285734 |
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| Protein GI | 262393880 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.810994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAC AACTTACCGT CACCAAGCGT GATGGCCGTA AAGAAAGTAT CGATCTGGAT
AAAATCCACC GCGTTATCAC TTGGGCTGCA GAAGGTCTAG ATAATGTTTC GGTTTCTCAA
GTAGAACTTC GCGCTCACAT CCAGTTTTAC GACGGCATCA CAACGACAGA TATTCACGAG
ACAATCATCA AGTCTGCGGC AGACCTGATC TCTGAAGAGA CTCCGGATTA CCAATACCTA
GCTGCTCGCC TAGCGGTATT CCATCTGCGT AAAAAAGCGT ATGGCCAATA CGAGCCACCA
ACGCTTCATG ATCACGTGTC TCGCCTCGTC GATATGGGTA AGTACGATCA ACATATTCTA
GAAGACTACA CAAAAGCAGA ACTCGACGAA CTTGATGCGT ACATCGACCA TAAACGCGAC
CTAAACTTCT CATACGCGGC AGTTAAGCAG CTAGAGGGCA AGTACTTCGT ACAAAACCGT
GTAACGGGCC AAATTTACGA AAGTGCTCAG TTCTTATATA TCCTTGTAGC AGCGTGCCTA
TTTGCGAAAT ATCCAAAAGC AACGCGTCTT GATTACATCA AGCGTTTCTA CGATGCGACA
TCGACATTTA AGATTTCTCT ACCTACGCCA ATTATGTCTG GCGTGCGTAC CCCTACTCGC
CAGTTCAGCT CATGTGTTCT GATTGAGTGT GGCGACAGTC TTGATTCTAT CAACGCAACA
GCAAGCTCGA TTGTTCGTTA CGTATCTCAG CGCGCTGGTA TTGGTATCAA CGCTGGTCGT
ATCCGTGCAT TAGGTTCAGA GATTCGCGGT GGTGAAGCAT TCCACACTGG CTGTATCCCG
TTCTACAAAT ACTTCCAAAC CGCAGTAAAA TGTTGTTCGC AAGGTGGTGT TCGTGGTGGC
GCAGCGACTG TATTCTACCC AATGTGGCAC GGCGAAGCTC GCTCTCTAAT GGTGCTTAAA
AACAACCGTG GTGTTGAAGA GAACCGTGTT CGTCACATGG ACTACGGTGT TCAGTTAAAC
AAACTGATGT ACCAACGTTT AGTTGAGGGT GGCAACATCA CACTATTCTC ACCTTCAGAC
GTACCGGGTC TATACGACGC ATTCTTCGAA AACCAAGAAG AGTTTGAGCG TCTATACGTG
AAGTACGAGA ACGATCCTTC AATCAAGAAA GAAACGGTTA AAGCGATTGA AATGTTCACT
CTGCTAATGC AAGAGCGTGC ATCAACAGGT CGTATCTACA TTCAGAACGT GGACCACTGT
AATACTCACA GCCCATTTGA TTCTGAAGTA GCGCCAGTTC GTCAATCGAA CCTATGTCTA
GAAATCGCAC TGCCAACGAA GCCATTAACT AACGTTGAAG ATGACTCGGG CGAGATCGCA
CTATGTACGC TTTCTGCCTT CAACCTTGGT GCTATCAAGT CTCTAGATGA TTTCGAAGAG
CTATCTGATC TTGTTGTTCG TGCGCTAGAT GCACTGCTTG ATTATCAAGA TTACCCTCTA
CCAGCGGCAT ACAAATCGAC GATGAACCGT CGTACGCTAG GTGTTGGTGT GATCAACTTC
GCTTATTACT TAGCGAAACA TGGCGTGAAA TACTCTGACG GTAGCGCAAA TGGCCTGACT
CACCGTACGT TCGAAGCAAT GCAGTACTAC CTACTAAAAG CATCGGTAGA ACTGGCGAAA
GAGCAAGGCA AGTGCCCTTC ATTCGACGAA ACGAACTACG CGAAAGGCTT ACTGCCGATT
GATACGTACA AGAAAGATAT CGACCTAATT TGTGACGAAG CGCTGCACTA CGACTGGGAC
AGCCTACGTA AAGAAATTAT GGAGCACGGC CTACGTAACT CAACACTGAC TGCGCTAATG
CCTTCTGAGA CCTCTTCTCA GATTTCAAAC GCCACTAACG GTATTGAGCC ACCACGTGGT
TATGTTTCAG TAAAAGCTTC GAAAGACGGT ATTCTGAAGC AAGTTGTACC TGAGTTCACT
GAACTTAAAG ACAACTATGA ACTGCTTTGG AACATCGGTT CGAACGACGG TTACCTACAT
CTTGTGGGTA TTATGCAGAA GTTTGTTGAC CAAGCTATCT CTGCTAATAC TAACTACGAT
CCGTCACGTT ACGAGACTGG CAAGGTACCA ATGAAGAAAC TACTTCAAGA CCTGCTAACA
GCGTACAAGT TTGGTGTGAA AACGCTTTAC TACCATAACA CTCGTGATGG CGCAAAAGAT
GAACAGAAAG ACGCTGTTCA ACCACAAGAT GACGATTGTG CTGGCGGCGG TTGTAAGATT
TAA
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| Protein sequence | MNQQLTVTKR DGRKESIDLD KIHRVITWAA EGLDNVSVSQ VELRAHIQFY DGITTTDIHE
TIIKSAADLI SEETPDYQYL AARLAVFHLR KKAYGQYEPP TLHDHVSRLV DMGKYDQHIL
EDYTKAELDE LDAYIDHKRD LNFSYAAVKQ LEGKYFVQNR VTGQIYESAQ FLYILVAACL
FAKYPKATRL DYIKRFYDAT STFKISLPTP IMSGVRTPTR QFSSCVLIEC GDSLDSINAT
ASSIVRYVSQ RAGIGINAGR IRALGSEIRG GEAFHTGCIP FYKYFQTAVK CCSQGGVRGG
AATVFYPMWH GEARSLMVLK NNRGVEENRV RHMDYGVQLN KLMYQRLVEG GNITLFSPSD
VPGLYDAFFE NQEEFERLYV KYENDPSIKK ETVKAIEMFT LLMQERASTG RIYIQNVDHC
NTHSPFDSEV APVRQSNLCL EIALPTKPLT NVEDDSGEIA LCTLSAFNLG AIKSLDDFEE
LSDLVVRALD ALLDYQDYPL PAAYKSTMNR RTLGVGVINF AYYLAKHGVK YSDGSANGLT
HRTFEAMQYY LLKASVELAK EQGKCPSFDE TNYAKGLLPI DTYKKDIDLI CDEALHYDWD
SLRKEIMEHG LRNSTLTALM PSETSSQISN ATNGIEPPRG YVSVKASKDG ILKQVVPEFT
ELKDNYELLW NIGSNDGYLH LVGIMQKFVD QAISANTNYD PSRYETGKVP MKKLLQDLLT
AYKFGVKTLY YHNTRDGAKD EQKDAVQPQD DDCAGGGCKI
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