| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2941 |
|---|
| Symbol | |
|---|
| ID | 3610367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3223794 |
|---|
| End bp | 3226733 |
|---|
| Gene Length | 2940 bp |
|---|
| Protein Length | 979 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637692351 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_297145 |
|---|
| Protein GI | 73542625 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0976266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGG CCCAGAACGA AATCACCACG GGCGCGACGG GCGCCGCCGG TATTGCAGGT
ACCGCGCAAC AGGCCCCCGC AGCCCAAGCC GGCACGACGA ACTACCAGGA TTACAAGATC
ATCCGCCGTA ACGGCGCCGT GGTGGCGTTC GAGCCGTCCA AGATCAACGT CGCCATGACC
AAGGCCTTCC TCGCCGTGAA CGGCGGGCAG GGCGCGGCTT CCGCGCGCGT GCGCGAGATC
GTCGAGCAAC TGACGCAGAA CGTCGTGCGC GCGCTGGTGC GCAGCCGCCC GAGCGGTGGC
GCCATCCATA TCGAAGACGT GCAAGACCAC GTCGAACTGG CCCTGATGCG CTCGGGTGAG
CACGAAGTGG CCCGTTCCTA TGTGCTGTAC CGCGAAAAGC GCGCGCAAGA GCGCGCCAGC
GCCAGCGCGC AGGCCGTGGC CCGCGTGCAG GAATCCGGCA TCCAGTTCAA CGTGACCGAC
GCCGGCGTGA CCAAGCCGCT GGACATCGTC GCGCTGCACG ATCTGCTCGA CACCGCCTGC
GCCGGCCTGG GCAAGGCCGT GAGCGCCGAG CCGATCCTCA AGGAAACGCT GAAGAACCTC
TACGAAGGCG TGCCGATGAC GCAGGTGTAC GACTCCGCCA TCCTGGCCGC GCGTACACTG
ATCGAAAAAG ACCCGGACTA CAGCCAGGTC ACCGCCCGTA TCCTGCTGCA CACCATCCGC
AAGGAAATCC TCGGTGCCGA AGTGACGCAG GCCGAAATGA CCACGCGTTA CGCCGAATAC
TTCCCGAAGT TCATCGCGCG CGGTATCGCC GCCGAGCTGC TGGACGAAAA GCTGGCCACG
TTCGACCTGG CCCGCCTGGG TGCTGCGCTG GACGCCGGCC GCGACTTCCA GTTCAACTAC
CTGGGCCTGC AGACGCTGTA TGACCGCTAC TTCCTGCACA TCGACGAGAC TCGCATCGAG
ATGCCGCAGG CATTCTTCAT GCGCGTCGCC ATGGGCCTGG CCCTCAACGA AGCCGACCGC
GAAGCGCGCG CCATCGAGTT CTACCAGCTG CTGTCGTCGT TCGACTTCAT GTCGTCCACG
CCGACCCTGT TCAACTCGGG CACCCGTCGC TCGCAGCTGT CGTCGTGCTA CCTGACCACC
GTCTCGGACG ACCTGGAAGG CATCTACGAA GCGCTCAAGG AAAACGCACT GCTGTCGAAG
TTCGCCGGCG GTCTGGGCAA TGACTGGACC AACGTGCGCG CGCTCGGCTC GCACATCAAG
GGCACCAACG GCAAGTCGCA GGGCGTGGTG CCGTTCCTGA AGGTGGTGAA CGACACCGCC
GTGGCCGTGA ACCAGGGTGG CAAGCGCAAG GGCGCCGTCT GCGCCTACCT GGAAACGTGG
CACCTGGACA TCGAAGAATT CCTGGAGCTG CGCAAGAACA CCGGCGACGA CCGCCGCCGC
ACCCACGACA TGAACACGGC CAACTGGATT CCGGACCTGT TCATGAAGCG CGTGATGGAA
AACGGCGAAT GGACGCTGTT CTCGCCGTCC ACCTGCCCGG ACCTGCACGA CAAGGTCGGC
AAGGCGTTCG AGCAGGCCTA CCTCGGCTAC GAAGCCAAGG CCGCCAGCGG CGAGCTGAAG
CTGTTCAAGA AGGTCCCGGC CATGCAGCTC TGGCGCAAGA TGCTGGGCAT GCTGTTCGAA
ACCGGCCACC CGTGGATCAC CTTCAAGGAT CCTTGCAACA TCCGCAGCCC GCAGCAGCAC
GTTGGCGTCG TCCACAGCTC CAACCTGTGC ACGGAAATCA CGCTGAACAC CAATGACAGC
GAAATCGCCG TCTGCAACCT GGGCTCGGTC AACCTGGTCG CGCACCTGAC GAAGCAGGCC
GATGGCTCGT ACGTGCTCGA CCACGCCAAG CTGCAGAAGA CCATCCGCAC CGCCATGCGG
ATGCTCGACA ACGTCATCGA CATCAACTAC TACGCTGTCG AGAAGGCCCG CAACTCCAAC
CTGCGCCACC GTCCGGTCGG CATGGGCATC ATGGGCTTCC AGGACTGCCT GCACGTGCTG
CGCACGCCGT ACGCCAGCGA CGCCGCGGTG AAGTTCGCCG ACACCTCGAT GGAAGCCGTG
TGCTACTACG CCTACCAGGC CTCCACCGAG CTGGCCGAAG AGCGTGGCCG CTACGAGACC
TACGCCGGCT CGCTGTGGGA CCGCGGCATC CTGCCGCAGG ACTCGCTCAA GCTGCTGGCC
GAAGAGCGCG GCGGCTACCT GGAAGTGGAT CACTCGAGCA GCATGGACTG GGACAGCCTG
CGCGGCCGCA TCAAGCAGCA CGGCATGCGC AACTCGAACT GCATCGCCAT TGCGCCGACC
GCCACGATCT CGAACATCAT CGGCGTGTCC GCGTGCATCG AGCCGACGTT CCAGAACCTG
TACGTCAAGT CGAACCTGTC GGGCGAATTC ACCGTGGTCA ATGACTACCT GGTGCGCGAC
CTGAAGGAAC GCGGCCTGTG GGACGAAGTG ATGGTTGCCG ACCTGAAGTA CTTCGACGGC
TCGCTGTCGC GCATCGACCG CATTCCGCAA GACCTGCGCG ACATCTACGC CACCGCGTTC
GAAGTCGAGC CGACCTGGCT GGTCGAAGCC GCCAGCCGCC GCCAGAAGTG GATCGACCAG
GCCCAGTCCC TGAACATCTA CATGGCCGGC GCCTCGGGCA AGAAGCTGGA CGACACCTAC
AAGCTGGCCT GGCTGCGCGG CCTGAAGACC ACGTACTACC TGCGCACCAT GGCTGCCACG
CACGTGGAGA AGTCCACCGT GTCGCGCGGC TCGCTGAATG CGGTGTCGTC GGGTAGTGAT
GGTGGTTCGG CAATGGATGC AGCGGCAGCC TCGGCACCGG CCATGCCGGA AGCGGAAGGC
GCGGTCTGCA CGATGCGTCC GGGCGACCCC GGCTTCGAAG AGTGCGAAGC CTGCCAGTAA
|
|---|
| Protein sequence | MQTAQNEITT GATGAAGIAG TAQQAPAAQA GTTNYQDYKI IRRNGAVVAF EPSKINVAMT
KAFLAVNGGQ GAASARVREI VEQLTQNVVR ALVRSRPSGG AIHIEDVQDH VELALMRSGE
HEVARSYVLY REKRAQERAS ASAQAVARVQ ESGIQFNVTD AGVTKPLDIV ALHDLLDTAC
AGLGKAVSAE PILKETLKNL YEGVPMTQVY DSAILAARTL IEKDPDYSQV TARILLHTIR
KEILGAEVTQ AEMTTRYAEY FPKFIARGIA AELLDEKLAT FDLARLGAAL DAGRDFQFNY
LGLQTLYDRY FLHIDETRIE MPQAFFMRVA MGLALNEADR EARAIEFYQL LSSFDFMSST
PTLFNSGTRR SQLSSCYLTT VSDDLEGIYE ALKENALLSK FAGGLGNDWT NVRALGSHIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLETW HLDIEEFLEL RKNTGDDRRR
THDMNTANWI PDLFMKRVME NGEWTLFSPS TCPDLHDKVG KAFEQAYLGY EAKAASGELK
LFKKVPAMQL WRKMLGMLFE TGHPWITFKD PCNIRSPQQH VGVVHSSNLC TEITLNTNDS
EIAVCNLGSV NLVAHLTKQA DGSYVLDHAK LQKTIRTAMR MLDNVIDINY YAVEKARNSN
LRHRPVGMGI MGFQDCLHVL RTPYASDAAV KFADTSMEAV CYYAYQASTE LAEERGRYET
YAGSLWDRGI LPQDSLKLLA EERGGYLEVD HSSSMDWDSL RGRIKQHGMR NSNCIAIAPT
ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNDYLVRD LKERGLWDEV MVADLKYFDG
SLSRIDRIPQ DLRDIYATAF EVEPTWLVEA ASRRQKWIDQ AQSLNIYMAG ASGKKLDDTY
KLAWLRGLKT TYYLRTMAAT HVEKSTVSRG SLNAVSSGSD GGSAMDAAAA SAPAMPEAEG
AVCTMRPGDP GFEECEACQ
|
|---|
| |