| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0463 |
|---|
| Symbol | |
|---|
| ID | 3761564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 518204 |
|---|
| End bp | 520486 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637785174 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_390733 |
|---|
| Protein GI | 78484808 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000234846 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAG AAACCATGAA TGTTGCCAAG CGCAATGGCG AAACAGAGCC GCTCGATTTA
GAAAAAATTC ACCGCGTTAT TACGTGGGCC GCCGAAGGTC TGGAAAATGT CTCCGTATCA
GAAGTTGAAT TGAGGTCTCA TATCCAATTT TATGACGGCA TGAAAACATC GGATATCCAT
GAGACGATTA TCAAATCTGC AGCGGACTTA ATTTCAGAAA GCGCACCCGA CTATCAGCAC
CTTGCGGCGC GACTGGCTAT TTTCCACTTA CGCAAAAAAG CATTTGACCG CTTTACACCA
CCAACCTTAT TTGAGCACGT CAATAAAATG GTACGCAATC GCCTTTACGA CCCTCAAATA
CAAGATGATT ACACGAAAGC GGAATTTGAT GAACTGGATA ACTACATCCA ACATGATCGT
GATATGAATT TCAGCTATGC TGCGGTCAAG CAACTGGAAG GAAAGTATTT AGTACAGAAC
CGTGTTACTG GCAAGATCTA TGAAAGCCCG CAATTTATTT ATATGCTGAT CCCTATGAGC
TTGTTTGCGC ATTATCCAAA CGACGCCGAG CCCGGCAAAA CACGATTGGA TTATGTAAAG
CGCTTTTACG ATGCGGCCTC TAACTTTAAA TTGTCTTTAC CAACGCCAAT TATGTCAGGG
GTACGCACAC CGACACGCCA ATTCAGCTCT TGCGTTCTTA TTGAATGCGG GGACTCATTA
GATTCGATCA ATGCCACCTC TTCTTCTATT GTGAAATACG TTTCTCAAAG AGCAGGCATC
GGTGTGAATG TTGGACAGAT TCGTGCACTC GGAAGTGAAA TCCGTGGCGG TGAAGCTTAT
CACACAGGCA TGATTCCCTT TATCAAACAC TTTCAAACCG CGGTTAAATC GTGCTCTCAG
GGCGGTGTAC GCGGCGGTGC AGCAACACTC TTTTTCCCTA TTTGGCACTT GGAAGTGGAA
TCTTTAATTG TTTTGAAGAA CAACCGTGGG GTAGAAGAAA ACCGAGCCCG TCATTTAGAT
TATGGGGTAC AGGTTAATAA GCTCATGTAT CAACGCATGA TTGAAGGTGG CAACATTACG
CTATTCAGCC CCTCCGATGT TCCTGGACTT TATGATGCTT TCTTTGAAGA CCAAGAAGAA
TTTGAACGCT TATACAAAAT CTACGAAGCC GATGACACCA TTCGTAAAAA AACCATGAAA
GCCGTTGACC TGTTTACCCA GGTCGCTCAA GAACGTGCAC AAACCGGCCG TATTTATATT
CAAAATGTGG ATCACTCCAA CACTCATAGT TCATTTGATC CGAAAAAAGC ACCGATTCAT
CAATCAAATC TCTGCTTGGA AATCACCCTT CCGACTCACC CACTCAATTC AGTGGATGAT
CCAGAAGGTG AAATTGCCTT ATGTACTTTA TCGGCATTCA ACTTAGGCGC ATTGGAAGAC
CTTGATGAGT TGGACGAACT CTCGGATCTT ATCGTTCGTG CTTTGGACAG CTTACTCGAT
TACCAAGACT ACCCGGTTGA AGCGGCTCGA AAAGCAAGCA TGGGGCGCAG AACATTAGGC
GTTGGAGTCA CAAACCTGGC TTATTATTTG GCTAAAAACC ATGTGAAGTA CTCGGATGGT
TCCGCCAACA ACTTAGTTCA CAAAGCATTT GAAGCCATTC AATATTACCT ATTGAAGGCC
TCTTTAAACT TGTCAAAAGA GTACGGTAAA TGTGACTTTT TTGAAGACAC TAAATACGCT
CAAGGCATTT TACCAATCGA CACCTATAAA AAAGAATTGG ATGAATTTTG CACTGAACCT
TTGCATTACG ACTGGGAAAC ACTTCGAAGC GAAATCCAGA AGCATGGTTT AAGAAATTCA
ACCATGACAG CGTTAATGCC TTGCGAAACC TCTTCGCAAA TCACCAATTC AACCAATGGA
ATTGAACCGC CACGTGGTTA TGTTTCTGTT AAAGCGTCTA AGGATGGTAT TTTGAAACAA
GTGGTTCCAG GCTTTAAAGA GTTTCGTGAT CAATATGAGT TGCTTTGGCA AATTCCTGAC
AATAAAGGCT ATTTACAGCT TGTCGGTATT ATGCAGAAGT TTGTGGATCA GGCTATCTCA
GCAAACACAA ACTATGACCC TGCTAAATTT GAAGACGGAC GCGTCCCGAT TAAACTGGTT
CTTCAAGATT TACTGTATGC CTATAAAGCG GGTTTAAAAA CGCTTTATTA CCACAACACT
CGAGATGGTG CGGATGACTC TCATGAAGAC GATGGATGTG CAGGAGGTGC GTGTAAGCTC
TAA
|
|---|
| Protein sequence | MSTETMNVAK RNGETEPLDL EKIHRVITWA AEGLENVSVS EVELRSHIQF YDGMKTSDIH
ETIIKSAADL ISESAPDYQH LAARLAIFHL RKKAFDRFTP PTLFEHVNKM VRNRLYDPQI
QDDYTKAEFD ELDNYIQHDR DMNFSYAAVK QLEGKYLVQN RVTGKIYESP QFIYMLIPMS
LFAHYPNDAE PGKTRLDYVK RFYDAASNFK LSLPTPIMSG VRTPTRQFSS CVLIECGDSL
DSINATSSSI VKYVSQRAGI GVNVGQIRAL GSEIRGGEAY HTGMIPFIKH FQTAVKSCSQ
GGVRGGAATL FFPIWHLEVE SLIVLKNNRG VEENRARHLD YGVQVNKLMY QRMIEGGNIT
LFSPSDVPGL YDAFFEDQEE FERLYKIYEA DDTIRKKTMK AVDLFTQVAQ ERAQTGRIYI
QNVDHSNTHS SFDPKKAPIH QSNLCLEITL PTHPLNSVDD PEGEIALCTL SAFNLGALED
LDELDELSDL IVRALDSLLD YQDYPVEAAR KASMGRRTLG VGVTNLAYYL AKNHVKYSDG
SANNLVHKAF EAIQYYLLKA SLNLSKEYGK CDFFEDTKYA QGILPIDTYK KELDEFCTEP
LHYDWETLRS EIQKHGLRNS TMTALMPCET SSQITNSTNG IEPPRGYVSV KASKDGILKQ
VVPGFKEFRD QYELLWQIPD NKGYLQLVGI MQKFVDQAIS ANTNYDPAKF EDGRVPIKLV
LQDLLYAYKA GLKTLYYHNT RDGADDSHED DGCAGGACKL
|
|---|
| |