| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2621 |
|---|
| Symbol | nrdA |
|---|
| ID | 6872621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 2502495 |
|---|
| End bp | 2504837 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642785689 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_002216346 |
|---|
| Protein GI | 198243793 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.0895131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAGC GGGGGGATAT TTTTCTTTCA CGGACAGGTA AACAGGTAGA AAACCACATG
AATCAGAGTC TGCTGGTGAC AAAGCGTGAC GGCCGTACTG AGCGCATCAA TCTCGACAAA
ATTCATCGCG TGCTTGATTG GGCGGCAGAA GGACTGAATA ACGTATCGGT TTCTCAGGTC
GAGCTACGCT CGCATATTCA GTTTTATGAT GGGATTAAGA CCTCCGATAT CCATGAAACT
ATCATTAAGG CCGCCGCAGA CCTGATCTCT CGCGATGCGT CGGATTATCA ATACCTGGCT
GCGCGTCTGG CGATTTTCCA CCTGCGTAAG AAAGCCTTCG GCCAGTTTGA GCCGCCCGCA
CTTTACCACC ATGTGGTAAA AATGGTTGAG CTTGGCAAAT ACGACAATCA TCTGCTGGAA
GACTACACGG AAGAAGAGTT CAAGCAGATG GATTCGTTTA TCGTTCACGA TCGCGATATG
ACCTTCTCCT ACGCTGCCGT TAAGCAGCTG GAAGGGAAAT ATCTGGTGCA AAACCGCGTG
ACCGGTGAAA TCTATGAAAG CGCGCAGTTC CTCTACATTC TGGTAGCGGC CTGCCTGTTC
TCGAACTACC CGCGTGAAAC GCGTCTTGAC TATGTAAAAC GTTTTTACGA TGCGGTCTCT
ACGTTCAAAA TCTCGCTGCC GACGCCCATC ATGTCCGGCG TGCGTACCCC GACCCGTCAG
TTCAGCTCCT GCGTACTGAT CGAGTGTGGC GACAGTCTGG ATTCCATCAA CGCCACCTCC
AGCGCGATTG TGAAATACGT TTCTCAGCGC GCCGGTATCG GCATCAACGC GGGACGCATT
CGTGCGCTGG GTAGCCCGAT TCGTGGCGGC GAAGCGTTCC ACACCGGCTG TATTCCGTTC
TACAAGCACT TCCAGACGGC GGTGAAATCC TGCTCGCAGG GCGGCGTGCG CGGCGGCGCG
GCGACACTGT TCTACCCGAT GTGGCACCTG GAAGTGGAAA GCCTGCTGGT ACTGAAAAAC
AACCGTGGCG TGGAAGGTAA CCGCGTACGT CACATGGACT ACGGCGTACA GATCAACAAA
CTGATGTACA CCCGCCTGCT GAAGGGCGGC GACATTACGC TGTTCAGTCC GTCCGATGTA
CCCGGGCTAT ACGATGCGTT CTTCGCCGAC CAGGACGAAT TCGAACGCCT GTACGTGAAA
TATGAAAACG ACGACAGCAT CCGCAAACAG CGTGTGAAAG CGGTCGAACT GTTCTCGCTG
ATGATGCAGG AACGCGCCTC TACCGGTCGT ATCTATATCC AGAACGTTGA CCACTGCAAT
ACTCACAGTC CGTTCGATCC GGTTGTCGCC CCGGTACGCC AGTCTAACCT GTGTCTGGAG
ATTGCCCTGC CGACCAAACC GCTGAACGAT GTCAACGATG AAAACGGCGA AATTGCGTTG
TGTACGCTGT CTGCATTCAA CCTGGGCGCC ATTAAAACTC TGGACGAGCT GGAAGAACTG
GCTATTCTGG CAGTACGCGC TTTGGATGCT CTGCTCGATT ATCAGGATTA CCCGATTCCG
GCTGCCAAAC GCGGCGCAAT GGGCCGTCGT ACGCTGGGCA TTGGCGTGAT TAACTTCGCC
TACTGGCTGG CGAAAAACGG TAAGCGTTAT TCCGACGGCA GCGCCAATAA TCTGACGCAT
AAAACCTTCG AAGCCATTCA GTACTATCTG CTTAAAGCGT CCAACGAACT GGCGAAAGAG
CAAGGCGCCT GCCCATGGTT CAACGAAACC ACCTATGCAA AAGGCATTTT GCCGATCGAC
ACCTACAAAA AAGATCTGGA TGCGATCGTC AACGAACCGC TGCACTACGA CTGGGAACAG
CTGCGTGAGT CGATCAAAAC CCACGGTCTG CGTAACTCCA CGCTATCGGC GCTAATGCCG
TCGGAAACGT CGTCCCAGAT CTCCAACGCC ACCAACGGCA TTGAGCCGCC GCGCGGCTAC
GTCAGCATCA AGGCCTCGAA AGACGGTATT TTGCGTCAGG TCGTGCCGGA TTATGAGCAT
CTGAAAGACG CTTACGAACT GTTGTGGGAG ATGCCGAACA ACGACGGTTA TCTGCAACTG
GTGGGTATCA TGCAGAAGTT TATCGATCAG TCGATTTCCG CCAATACCAA CTACGATCCG
TCACGTTTCC CGTCAGGAAA AGTGCCGATG CAGCAACTGC TGAAAGATTT GCTCACCGCG
TATAAGTTTG GCGTGAAAAC CCTGTACTAT CAAAATACCC GCGACGGCGC GGAAGATGCG
CAGGACGATT TGGCGCCTTC TATTCAGGAC GATGGCTGCG AAAGCGGCGC TTGTAAGATC
TGA
|
|---|
| Protein sequence | MDKRGDIFLS RTGKQVENHM NQSLLVTKRD GRTERINLDK IHRVLDWAAE GLNNVSVSQV
ELRSHIQFYD GIKTSDIHET IIKAAADLIS RDASDYQYLA ARLAIFHLRK KAFGQFEPPA
LYHHVVKMVE LGKYDNHLLE DYTEEEFKQM DSFIVHDRDM TFSYAAVKQL EGKYLVQNRV
TGEIYESAQF LYILVAACLF SNYPRETRLD YVKRFYDAVS TFKISLPTPI MSGVRTPTRQ
FSSCVLIECG DSLDSINATS SAIVKYVSQR AGIGINAGRI RALGSPIRGG EAFHTGCIPF
YKHFQTAVKS CSQGGVRGGA ATLFYPMWHL EVESLLVLKN NRGVEGNRVR HMDYGVQINK
LMYTRLLKGG DITLFSPSDV PGLYDAFFAD QDEFERLYVK YENDDSIRKQ RVKAVELFSL
MMQERASTGR IYIQNVDHCN THSPFDPVVA PVRQSNLCLE IALPTKPLND VNDENGEIAL
CTLSAFNLGA IKTLDELEEL AILAVRALDA LLDYQDYPIP AAKRGAMGRR TLGIGVINFA
YWLAKNGKRY SDGSANNLTH KTFEAIQYYL LKASNELAKE QGACPWFNET TYAKGILPID
TYKKDLDAIV NEPLHYDWEQ LRESIKTHGL RNSTLSALMP SETSSQISNA TNGIEPPRGY
VSIKASKDGI LRQVVPDYEH LKDAYELLWE MPNNDGYLQL VGIMQKFIDQ SISANTNYDP
SRFPSGKVPM QQLLKDLLTA YKFGVKTLYY QNTRDGAEDA QDDLAPSIQD DGCESGACKI
|
|---|
| |