| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1577 |
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| Symbol | |
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| ID | 5204880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1938073 |
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| End bp | 1940349 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599799 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001280468 |
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| Protein GI | 148653375 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0106565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATA TGGATAATAT TAAAGTAATG AAACGAGACG GCCGTCTAGA GCCCATCGAT
TTAGATAAAA TCCATAAGGT CATTACTTGG GCAGCCGAAG GATTAGACAA TGTTTCTGTA
TCTCAGGTTG AGTTAAAGTC GCACATTCAG TTTTATGATG GCATCAAAAC CCGTGACATT
CACGAGACCA TCATTAAGGC TGCTGCTGAC CTAATCTCTG AGGATACGCC AGATTATCAA
TATCTTGCGG CACGTTTGGC AATCTTCCAC TTGCGTAAAA TTGCCTACAA TCAATTTGAG
CCACCTCACC TATTTGACCA TGTAACCAAA TTAACCGAGG CGGGTAAATA CGATCAGCAC
ATTTTACAAG ACTACTCACG TGAAGAGTTT GATGAGTTAA ATGACTACAT CGACCACTGG
CGCGATATGA ATCTTGCTTA TGCCGCTGCC GAACAAATGG CTGGTAAATA CTTAGTACAA
GACCGTGTGA CCAAAACCGT TTACGAAAGT CCGCAGTTCT TATATGTACT GGTGGGCATG
TGTCTGTTCG CCTCATACGA TAAGTCTGAG CGCATGCACT ATGTGAAGCG TTTTTATGAT
GCCGCCTCTA CGTTCAAAAT CTCATTACCC ACCCCCATTA TGTCCGGTGT GCGCACCCCT
TCACGTCAAT TTAGCTCGTG CGTACTGATT GAATGTGGTG ATAGCTTAGA CTCAATCAAC
GCCACAACCA GCGCCATTGT ACGCTATGTA TCGCAGCGTG CTGGTATTGG TATCAATGCC
GGTAACATCC GTGCGCTAGG CAGCCCTATC CGAGGCGGTG AAGCTCAGCA CACCGGCTGT
ATCCCTTTTT ATAAGCTGTT CCAAACCGCA GTTAAATGCT GCTCGCAAGG TGGCGTACGT
GGCGGCGCGG CAACCTTATT CTACCCACTG TGGCACTTAG AAGTAGAGTC GCTATTGGTT
CTAAAAAATA ACCGCGGCGT AGAAGACAAC CGTGTGCGCC ATATGGACTA TGGCGTACAA
ATTAACCGCC CCTTATATAC CCGTTTGATT AAAGGTGAAG ACATCGCTTT ATTCTCACCT
TCAGATGTGC CTGGTCTATA TGAAGCCTTC TTCGCTGACC AAGACAAGTT TGAAGCGCTA
TACACCAAGT ACGAAAAAGA CGACAACATC CGCAAACGTC ATGTGCCTGC AGCCGATCTA
TTTAGCTTAT TGATGCAAGA GCGTGCCAGT ACTGGTCGTA TCTACATCCA AAACGTGGAC
CACTGCAACA CGCACAGCCC ATTTGACCCA ACTGTCGCCC CTATCCGTCA GTCAAACCTA
TGTATGGAAA TTGCGCTACC AACTAAGCCG CTGGATAATA TTAATGACGA AGAAGGCGAA
ATTGCACTGT GCACCCTATC TGCGGTGAAC CTTGGCGAAG TCGATAGCTT AGAGGATATC
GAAGAGCCTG CAGAATTAAT CGTGCGCGCC TTAGATGCGC TACTTGATTA CCAAGATTAC
CCAGTAAAAG CCGCTGAAAA TGGCAGCATG AATCGCCGTA CGCTGGGTGT GGGTGTGATT
AACTATGCTT ATTACTTGGC TAAAAATGGT ACCCGCTACT CGGACGGCTC AGCGCTTGGT
CTGACGCACC AGACTTTTGA GGCATTGCAG TACTATTTAC TAAAAGCCTC GAACAAACTG
GCCAAAGAAA AAGGCGCTTG CCCCGCCTTT AATGAGACCA CTTACTCACA AGGTATTTTG
CCGATTGATA CTTACAAAGC GGACTTAGAT AAGGTGTGCA ATGAGCCATT GCGCCTTGAT
TGGGAAGCGT TACGTCAGGA GATTAAAACC CATGGCCTTC GCAACTCTAC TTTGTCAGCC
TTGATGCCTT CTGAGACCTC AAGCCAGATT GCTAACGCCA CCAACGGTAT TGAGCCACCT
CGTGGTCTGG TATCAGTAAA AGCGTCAAAA GATGGTATCT TAAAGCAAGT GGTGCCCGAT
ATCTTAAACT TAAAAGGCAA CTACGAGCTA TTGTGGCAAA TGCCAAATAA TGATGGCTAT
CTAAAGCTGG TGGCCGTGAT GCAAAAGTTC ATTGACCAAA GCATCTCCGC CAACACCAAC
TACGATCCAA CCCGCTTCGA GGGCAATCGT GTACCTATGA AGGTATTGCT AAAAGACTTG
CTAACTGCTT ATAAACTGGG CGTTAAGACA CTTTACTATC ACAACACTCG TGATGGTGCT
AATGATGCTC AAGCCGATAT CGATGACGGC TGTGCCAGCG GTGCTTGTAA GCTGTAA
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| Protein sequence | MTHMDNIKVM KRDGRLEPID LDKIHKVITW AAEGLDNVSV SQVELKSHIQ FYDGIKTRDI
HETIIKAAAD LISEDTPDYQ YLAARLAIFH LRKIAYNQFE PPHLFDHVTK LTEAGKYDQH
ILQDYSREEF DELNDYIDHW RDMNLAYAAA EQMAGKYLVQ DRVTKTVYES PQFLYVLVGM
CLFASYDKSE RMHYVKRFYD AASTFKISLP TPIMSGVRTP SRQFSSCVLI ECGDSLDSIN
ATTSAIVRYV SQRAGIGINA GNIRALGSPI RGGEAQHTGC IPFYKLFQTA VKCCSQGGVR
GGAATLFYPL WHLEVESLLV LKNNRGVEDN RVRHMDYGVQ INRPLYTRLI KGEDIALFSP
SDVPGLYEAF FADQDKFEAL YTKYEKDDNI RKRHVPAADL FSLLMQERAS TGRIYIQNVD
HCNTHSPFDP TVAPIRQSNL CMEIALPTKP LDNINDEEGE IALCTLSAVN LGEVDSLEDI
EEPAELIVRA LDALLDYQDY PVKAAENGSM NRRTLGVGVI NYAYYLAKNG TRYSDGSALG
LTHQTFEALQ YYLLKASNKL AKEKGACPAF NETTYSQGIL PIDTYKADLD KVCNEPLRLD
WEALRQEIKT HGLRNSTLSA LMPSETSSQI ANATNGIEPP RGLVSVKASK DGILKQVVPD
ILNLKGNYEL LWQMPNNDGY LKLVAVMQKF IDQSISANTN YDPTRFEGNR VPMKVLLKDL
LTAYKLGVKT LYYHNTRDGA NDAQADIDDG CASGACKL
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