Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2848 |
Symbol | |
ID | 6089543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3138770 |
End bp | 3141058 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597919 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001721577 |
Protein GI | 170025072 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAA GCCTACTTGT TACTAAACGC GATGGCAGCA AAGAACGCAT TAATCTGGAT AAAATCCACA GGGTCATCGA CTGGGCCGCC GAAGGTTTAC ATAACGTCTC GGTATCACAA GTAGAATTGC GTTCACACAT TCAGTTTTAT GATGGCATCA AAACCTCTGA CATTCATGAA ACAATTATCA AGGCCGCCGC AGACTTGATC TCCCGTGATG CCCCGGATTA TCAATATCTG GCTGCCCGTT TAGCCATTTT CCACCTGCGT AAAAAAGCCT ATGGTCAGTT TGAACCCCCT ACGCTTTTCG CTCATGTGTC GAAAATGGTA GAAATGGGTA AATATGACAA ACATCTGCTG GAAGATTACA CCGCAGAAGA ATTTGAGCAG ATGGACACTT TCATCGACCA TTGGCGCGAT ATGAATTTCT CCTACGCTGC GGTTAAGCAG TTGGAAGGTA AATATCTGGT GCAGAACCGT GTAAGCGGTG AGATCTATGA AAGTGCCCAA TTCCTGTACA TTCTGGTTTC AGCTTGCCTG TTCTCCGGCT ACCCGCGTGA AACCCGTCTG GATTACATCA AGCGTTTCTA CGACGCTATC TCTACGTTTA AAATTTCACT GCCAACACCG ATCATGGCCG GTGTGCGTAC CCCCACCCGC CAGTTCAGCT CTTGCGTACT GATTGAATGT GGTGACAGCC TGGATTCTAT TAATGCCACC TCCAGCGCTA TCGTGAAATA CGTGTCACAG CGTGCCGGTA TCGGTATCAA TGCAGGCCGT ATCCGCGCGT TGGGTAGCCC AATTCGTGGC GGTGAAGCAT TCCATACGGG TTGCATCCCA TTCTATAAGC ACTTCCAGAC GGCGGTTAAA TCCTGCTCAC AGGGCGGTGT TCGTGGCGGC GCGGCCACGT TGTTCTACCC AATGTGGCAT CTGGAAGTCG AGAGCCTACT GGTCCTGAAA AACAACCGTG GTGTTGAAGG TAACCGTGTC CGTCATATGG ATTACGGTGT GCAAATCAAC AAACTGATGT ATCAGCGTCT GTTGAAAGGT GGAGATATCA CCTTGTTTAG CCCTTCTGAT GTACCGGGGC TCTATGATGC GTTCTTTGCC GATCAGGATG AATTTGAACG CCTGTATGTC AAATACGAGC AAGACAGCAG TATCCGTAAG CAACGGGTGA AAGCGGTTGA GCTATTCTCT TTGATGATGC AAGAGCGTGC TTCTACTGGC CGTATCTATA TTCAAAATGT TGACCACTGC AACACGCACA GCCCGTTTGA TCCGAAAATT GCCCCGGTGC GTCAGTCTAA CCTGTGCCTG GAAATTGCAT TACCGACTAA GCCGCTGAAT GACATCAACG ATGAGAATGG CGAAATTGCA CTCTGTACGT TGTCAGCGTT CAACCTCGGT GCCATTGATA GCCTCGATGA TTTAGAAGAT CTGGCCATAC TGGCAGTACG TGCACTGGAT GCCTTGCTGG ATTATCAGGA CTACCCGATT GCAGCAGCAC AACGTGGTGC CATGGGCCGC CGTACCTTGG GGATTGGGGT GATTAACTTT GCCTATTATC TGGCGAAGAA CGGCGTGCGT TATTCTGACG GCAGTGCTAA TAACCTGACA CACCGGACTT TCGAAGCCAT TCAGTACTAT TTGTTGAAAG CATCTAACGC TCTGGCCCGT GAACAAGGCG CTTGCCCGTG GTTTAACGAA ACCACGTATT CACAAGGTAT TTTGCCGATC GATACCTATA AGAAAGATTT GGATGCCATC AGCAATGAAC CTCTACATTA CGATTGGGAA ACACTGCGTA AAGAGATTCA GACTCATGGG TTGCGTAACT CCACGTTGTC GGCATTGATG CCATCCGAGA CCTCATCGCA GATCTCCAAT GCGACCAACG GTATTGAACC ACCGCGGGGT TACGTCAGCA TCAAAGCCTC TAAAGATGGT ATTCTGCGTC AGGTCGTGCC TGAATATGAA CGCTTGAAAG GCGCTTACGA GCTGCTGTGG GAAATGCCGA ATAATGACGG CTACCTGCAA CTGGTTGGTT TGATGCAAAA ATTTGTCGAT CAAGCGATAT CGGCGAACAC CAATTATGAT CCAACCCGCT TCCCATCAGG TAAAGTACCG ATGAAGCAGT TGCTGAAAGA TTTGCTGACC ACCTATAAAT TTGGTGTGAA AACGCTTTAC TATCAAAACA CCCGTGACGG CGCTGATGAT GTGCAAGAAG ACATTCAATC AAGCCTGCCG GGTGATGACG ACTGCGAAGG CGGTGCATGT AAGATTTAG
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Protein sequence | MNQSLLVTKR DGSKERINLD KIHRVIDWAA EGLHNVSVSQ VELRSHIQFY DGIKTSDIHE TIIKAAADLI SRDAPDYQYL AARLAIFHLR KKAYGQFEPP TLFAHVSKMV EMGKYDKHLL EDYTAEEFEQ MDTFIDHWRD MNFSYAAVKQ LEGKYLVQNR VSGEIYESAQ FLYILVSACL FSGYPRETRL DYIKRFYDAI STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT SSAIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCIP FYKHFQTAVK SCSQGGVRGG AATLFYPMWH LEVESLLVLK NNRGVEGNRV RHMDYGVQIN KLMYQRLLKG GDITLFSPSD VPGLYDAFFA DQDEFERLYV KYEQDSSIRK QRVKAVELFS LMMQERASTG RIYIQNVDHC NTHSPFDPKI APVRQSNLCL EIALPTKPLN DINDENGEIA LCTLSAFNLG AIDSLDDLED LAILAVRALD ALLDYQDYPI AAAQRGAMGR RTLGIGVINF AYYLAKNGVR YSDGSANNLT HRTFEAIQYY LLKASNALAR EQGACPWFNE TTYSQGILPI DTYKKDLDAI SNEPLHYDWE TLRKEIQTHG LRNSTLSALM PSETSSQISN ATNGIEPPRG YVSIKASKDG ILRQVVPEYE RLKGAYELLW EMPNNDGYLQ LVGLMQKFVD QAISANTNYD PTRFPSGKVP MKQLLKDLLT TYKFGVKTLY YQNTRDGADD VQEDIQSSLP GDDDCEGGAC KI
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