More than 300 homologs were found in PanDaTox collection
for query gene Dret_1009 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_1009  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
569 aa  1151    Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.103849  normal  0.0253995 
 
 
-
 
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  53.97 
 
 
718 aa  388  1e-106  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  55.66 
 
 
699 aa  378  1e-103  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0659  methyl-accepting chemotaxis sensory transducer  56.06 
 
 
798 aa  322  9.999999999999999e-87  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0660  methyl-accepting chemotaxis sensory transducer  50.66 
 
 
675 aa  309  1.0000000000000001e-82  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.84238 
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
791 aa  303  8.000000000000001e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
574 aa  282  1e-74  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_013223  Dret_0933  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
780 aa  277  3e-73  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.156704 
 
 
-
 
NC_011769  DvMF_0917  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.83 
 
 
602 aa  266  1e-69  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0520327 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.23 
 
 
574 aa  263  4.999999999999999e-69  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_011769  DvMF_1869  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.41 
 
 
607 aa  262  1e-68  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0614  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
541 aa  255  1.0000000000000001e-66  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
544 aa  254  4.0000000000000004e-66  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_010571  Oter_0611  methyl-accepting chemotaxis sensory transducer  54.51 
 
 
547 aa  252  1e-65  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3353  methyl-accepting chemotaxis sensory transducer  49.07 
 
 
527 aa  250  6e-65  Opitutus terrae PB90-1  Bacteria  normal  0.416651  normal  0.952681 
 
 
-
 
NC_008751  Dvul_0339  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
603 aa  242  1e-62  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.774772 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  33.33 
 
 
585 aa  238  2e-61  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010571  Oter_0364  methyl-accepting chemotaxis sensory transducer  55.32 
 
 
561 aa  238  3e-61  Opitutus terrae PB90-1  Bacteria  normal  0.056342  normal  0.0235537 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
584 aa  236  6e-61  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0815  methyl-accepting chemotaxis sensory transducer  55.02 
 
 
538 aa  232  1e-59  Opitutus terrae PB90-1  Bacteria  normal  0.260319  normal  0.290459 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
587 aa  232  1e-59  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.66 
 
 
584 aa  230  7e-59  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
585 aa  229  1e-58  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010571  Oter_0384  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
671 aa  227  4e-58  Opitutus terrae PB90-1  Bacteria  normal  normal  0.916816 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
513 aa  226  7e-58  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.7 
 
 
513 aa  226  7e-58  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  36.72 
 
 
584 aa  226  8e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
515 aa  225  1e-57  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_013223  Dret_0657  methyl-accepting chemotaxis sensory transducer  56.6 
 
 
617 aa  223  9e-57  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
517 aa  222  9.999999999999999e-57  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
517 aa  221  3e-56  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
541 aa  221  3e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
541 aa  221  3e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
517 aa  221  3.9999999999999997e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  32.33 
 
 
517 aa  220  6e-56  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  32.77 
 
 
517 aa  219  1e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  32.58 
 
 
517 aa  218  2e-55  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.77 
 
 
532 aa  219  2e-55  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  35.2 
 
 
464 aa  216  8e-55  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_010571  Oter_4504  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
521 aa  214  2.9999999999999995e-54  Opitutus terrae PB90-1  Bacteria  normal  normal  0.249783 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
618 aa  213  5.999999999999999e-54  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
610 aa  213  7e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
542 aa  213  9e-54  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  33.93 
 
 
513 aa  213  9e-54  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
519 aa  212  2e-53  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
520 aa  211  3e-53  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
513 aa  211  3e-53  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  31.19 
 
 
518 aa  211  4e-53  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
541 aa  210  5e-53  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010571  Oter_0167  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
681 aa  209  1e-52  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
519 aa  208  2e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
517 aa  206  7e-52  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.93 
 
 
579 aa  206  7e-52  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  46.97 
 
 
516 aa  206  9e-52  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  32.65 
 
 
546 aa  206  1e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
832 aa  206  1e-51  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  32.65 
 
 
546 aa  205  2e-51  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
545 aa  205  2e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  32.65 
 
 
546 aa  205  2e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  32.65 
 
 
546 aa  205  2e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  32.65 
 
 
546 aa  205  2e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  45.83 
 
 
740 aa  204  3e-51  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  42.86 
 
 
702 aa  204  3e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3246  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
601 aa  204  3e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.416407  n/a   
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.2 
 
 
529 aa  204  4e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  34.3 
 
 
482 aa  203  5e-51  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_011883  Ddes_0166  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.85 
 
 
601 aa  203  7e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
600 aa  203  7e-51  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  30.74 
 
 
598 aa  203  7e-51  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
563 aa  203  9e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  52.44 
 
 
905 aa  202  9e-51  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  45.36 
 
 
740 aa  201  3e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  43.79 
 
 
744 aa  201  3.9999999999999996e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  44.16 
 
 
706 aa  201  3.9999999999999996e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  56.42 
 
 
905 aa  201  3.9999999999999996e-50  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  56.42 
 
 
908 aa  200  3.9999999999999996e-50  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
519 aa  200  5e-50  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
518 aa  200  7e-50  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  43.31 
 
 
695 aa  199  7.999999999999999e-50  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_013512  Sdel_1991  chemotaxis sensory transducer  41.1 
 
 
661 aa  199  9e-50  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  43.56 
 
 
779 aa  199  1.0000000000000001e-49  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  30.92 
 
 
521 aa  199  2.0000000000000003e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  30.92 
 
 
521 aa  199  2.0000000000000003e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4099  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
522 aa  199  2.0000000000000003e-49  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  30.92 
 
 
521 aa  199  2.0000000000000003e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  33.41 
 
 
456 aa  196  7e-49  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  48.5 
 
 
586 aa  196  7e-49  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  33.41 
 
 
485 aa  196  9e-49  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  34.5 
 
 
526 aa  196  9e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  33.41 
 
 
485 aa  196  9e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  49.6 
 
 
676 aa  196  9e-49  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.79 
 
 
566 aa  196  1e-48  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  34.5 
 
 
511 aa  196  1e-48  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  48.82 
 
 
602 aa  196  1e-48  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
567 aa  195  2e-48  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  41.38 
 
 
557 aa  195  2e-48  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
508 aa  195  2e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
598 aa  194  3e-48  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  42.76 
 
 
583 aa  194  3e-48  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  31.52 
 
 
545 aa  194  3e-48  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
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