Gene Dvul_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0339 
Symbol 
ID4662364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp430743 
End bp432554 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content64% 
IMG OID639818541 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_965789 
Protein GI120601389 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.774772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTA ACTATTCCAT CGCCACGCGC GTCATTGCGC TACTGGTATT CATGGTCCTG 
TTCGTCGGCG GCGTCATGGC CGCCTACCAT CACACCATCG ACAAGGTCTC GGGCCTGGGC
GTCGAAGAGA CGCAGAAGGT CATGCTCGAA CAGGAGAAGA TGAAACTCCA GGTGGCCACG
CATTCCGCCA GCCTCGCCCT TGGCGAACTC ACGGCGCACC TCGCCGATGA CGAGGCGAAG
GTGGCGGCCA TCCGCAAGGC CATCGACGGC ATCCGCTTCG AGAAGGACAA GTCGGGCTAC
TTCTTCGTCT ACAGGGGCAC GGTCAACGTC GCGCTACCGA CCAAGAAGGA AGTGCAGGGC
AAGGACCTTG GCGGTGCCAA GGACAAGAAC AACGTGTTCT ACGTCCGCGA ACTTTCCCAG
CGCGCCGCAC AGGGCGGCGG ATTCGTCGAG TACGTCTTCG ACAAGCCCGG CAAGGGCGAC
CAGCCCAAGC TTGCCTACGC CGAAGCCATT CCCGGCACCG ACTACTGGAT AGGCACGGGC
GTCTACATCG ACAACATCGA CGCCACCAAG ACCGCCATCA GCAAGGACAT GGGCGACGTG
GTCGCAGACG AAGTCACGCG CCTGTTCCTC ATCATCACAG CCGTCCTCGT GCTTGGCGTC
ATCCCGCTGT GTGTGCTCAT CATCACTGGT ATCGTGCGCC CGTTGCGCGA GGCCACGGGC
GCGGCGCAGG GAGTCGCCGC CGGCAACCTC GACATCCGCA TCGTGGAACA GGGTCGCGAC
GAAGTGGCCC AACTTCAGAA GGCCCTCAAC AGCATGGTCG CCACACTGCG CACCAACATG
GACGACATCA AGGCCAAGGA GGCCGAAGCC AACAGGCAGG CCGATGTCGC CCGTGACGCG
GCCCGTCAGG CCGACGAGGC GCGCATGAAG GCCGCAGCAG CCACCAGAGA GGGCATGCTG
ACAGCGGCGT CACGTCTCGA AGGTGTTGTG AAGCGCATCA ACGGTGCAAC CAGCGACCTC
GAACGCAGGG CCGGAGACAT CGACCGCGGC ACGGACAACC AGCTTGCCCG CATCGGCGAG
ACGGCCACCG CCATGGAAGA GATGAACGCC ACCGTGCTTG AAGTGGCCCG CAACGCAGGC
CGCGCCGCCG AACAGACCGA CTCTTCGCGT GCACAGGCCG AGAACGGCGC CGAGATGGTG
AGCCGCACCG TGAAGGCCAT GGAGGACCTG AAGCAGCTTG CCACGGGGCT GAAGGACAAC
ATGCACCGCC TCGGGCAGCA GTCGGAGGCC ATCGGGCATG TCATGAACGT CATCAACGAC
ATCGCCGACC AGACCAACCT GCTGGCCCTC AACGCCGCCA TCGAAGCGGC CCGTGCGGGT
GAAGCGGGAC GCGGCTTCGC CGTCGTGGCC GATGAAGTCC GCAAGCTTGC CGAAAAGACC
ATGGGTGCGA CCAAGGAGGT GGGCGACTCC ATCCGCGCCA TACAGGGACT GGCCCGCACC
AACGTCGACT CCATGGACGA AGCCGTCTCC GCCATCGACG GGGCAGCGCG CCTGTCTTCC
TCCTCCGGCG ACCTGCTGAA GGAAATCGTC CGCACGGCCC ATGACGCCGC AGGGCAGGTA
CAGGCCATCG CCGCCGCCGC TGAAGAGCAG TCCGCCGCCA GCGAGGAAAT CACCCGCAGC
GTGGAGGACA TCAACCGCAT CGCCCGTGAC AGCGGCGAAC TCATACGCGC CGCCAACAAC
GACATCCGCG ACCTTGCGGA ACAGGCCGAA GAGTTGCATC AGCTCATCAA CGCACTCAAG
AACGACGCAT GA
 
Protein sequence
MLRNYSIATR VIALLVFMVL FVGGVMAAYH HTIDKVSGLG VEETQKVMLE QEKMKLQVAT 
HSASLALGEL TAHLADDEAK VAAIRKAIDG IRFEKDKSGY FFVYRGTVNV ALPTKKEVQG
KDLGGAKDKN NVFYVRELSQ RAAQGGGFVE YVFDKPGKGD QPKLAYAEAI PGTDYWIGTG
VYIDNIDATK TAISKDMGDV VADEVTRLFL IITAVLVLGV IPLCVLIITG IVRPLREATG
AAQGVAAGNL DIRIVEQGRD EVAQLQKALN SMVATLRTNM DDIKAKEAEA NRQADVARDA
ARQADEARMK AAAATREGML TAASRLEGVV KRINGATSDL ERRAGDIDRG TDNQLARIGE
TATAMEEMNA TVLEVARNAG RAAEQTDSSR AQAENGAEMV SRTVKAMEDL KQLATGLKDN
MHRLGQQSEA IGHVMNVIND IADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRKLAEKT
MGATKEVGDS IRAIQGLART NVDSMDEAVS AIDGAARLSS SSGDLLKEIV RTAHDAAGQV
QAIAAAAEEQ SAASEEITRS VEDINRIARD SGELIRAANN DIRDLAEQAE ELHQLINALK
NDA