More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1390 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  100 
 
 
308 aa  614  1e-175  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  53.72 
 
 
296 aa  313  1.9999999999999998e-84  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
309 aa  230  2e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  39.2 
 
 
320 aa  228  1e-58  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
316 aa  227  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  37 
 
 
321 aa  225  8e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
318 aa  223  3e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
318 aa  223  3e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
307 aa  221  9.999999999999999e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.43 
 
 
307 aa  221  9.999999999999999e-57  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
319 aa  219  3.9999999999999997e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
308 aa  218  1e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
309 aa  216  5e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
309 aa  214  1.9999999999999998e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  35.92 
 
 
292 aa  213  3.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  40.48 
 
 
287 aa  213  4.9999999999999996e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  40 
 
 
299 aa  213  4.9999999999999996e-54  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  38.21 
 
 
294 aa  212  4.9999999999999996e-54  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  40.96 
 
 
275 aa  212  5.999999999999999e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
313 aa  211  9e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
297 aa  211  1e-53  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  41.22 
 
 
305 aa  209  4e-53  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
317 aa  209  7e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
305 aa  208  1e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  34 
 
 
314 aa  207  2e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
316 aa  206  5e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3032  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
307 aa  202  8e-51  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
316 aa  201  9.999999999999999e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  38.6 
 
 
287 aa  201  1.9999999999999998e-50  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
317 aa  200  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
317 aa  200  3e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
310 aa  198  7.999999999999999e-50  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
316 aa  198  1.0000000000000001e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
307 aa  197  2.0000000000000003e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
315 aa  196  3e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  37.11 
 
 
294 aa  196  3e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
291 aa  197  3e-49  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  35.43 
 
 
310 aa  195  6e-49  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  35.86 
 
 
310 aa  195  7e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
321 aa  195  7e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
296 aa  195  9e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.09 
 
 
310 aa  194  1e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  35.1 
 
 
310 aa  194  2e-48  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  35.1 
 
 
310 aa  194  2e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  35.1 
 
 
310 aa  194  2e-48  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  35.1 
 
 
310 aa  194  2e-48  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
313 aa  193  3e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  34.65 
 
 
310 aa  193  4e-48  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  34.65 
 
 
310 aa  193  4e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
326 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
302 aa  192  4e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
317 aa  192  4e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
310 aa  192  5e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
305 aa  192  6e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
292 aa  192  7e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  35.66 
 
 
321 aa  192  9e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
308 aa  191  1e-47  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  38.62 
 
 
312 aa  189  2.9999999999999997e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
317 aa  189  4e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
300 aa  189  5.999999999999999e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
294 aa  189  7e-47  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
305 aa  187  1e-46  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.05 
 
 
317 aa  187  2e-46  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
306 aa  187  2e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
295 aa  187  3e-46  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
314 aa  186  6e-46  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
305 aa  185  7e-46  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
328 aa  185  9e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
292 aa  184  1.0000000000000001e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
316 aa  183  3e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
309 aa  183  4.0000000000000006e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
285 aa  183  4.0000000000000006e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
420 aa  182  6e-45  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
293 aa  182  6e-45  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
306 aa  182  9.000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
420 aa  181  9.000000000000001e-45  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
306 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  34.81 
 
 
319 aa  181  2e-44  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
319 aa  180  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
319 aa  180  2e-44  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
305 aa  180  2e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  34.71 
 
 
294 aa  180  2e-44  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
314 aa  181  2e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
306 aa  181  2e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
298 aa  180  2.9999999999999997e-44  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  34.81 
 
 
319 aa  180  2.9999999999999997e-44  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
307 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
310 aa  179  4e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
318 aa  179  4.999999999999999e-44  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
319 aa  179  4.999999999999999e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
295 aa  179  5.999999999999999e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0395  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
436 aa  179  5.999999999999999e-44  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  178  9e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  35 
 
 
300 aa  178  9e-44  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
293 aa  178  1e-43  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.75 
 
 
300 aa  177  2e-43  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
299 aa  177  2e-43  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
312 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
292 aa  176  5e-43  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
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