Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1390 |
Symbol | |
ID | 5742340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1729845 |
End bp | 1730771 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641292493 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001558504 |
Protein GI | 160879536 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TTGTCATTAA TAAAAAAAGG TATATCAAAA ATAAGCATAA AGATAATTTA ACAGCGTTTT TATTTTTACT ACCCTGCTTG ATAGGCTTTG TGGCATTCAT CGTATTCCCT GTAGTAGCAT CATTACTGCT GGGCTTTACG GAGTGGAATT TCCTAGGGGG ATTAAAAGGA ATTAAATTTA TTGGACTTGA TAATTTTAAA ACACTATTAA GCGGTAAGGA TTTGTGGTTT AACGAGTCGT TTAAAAACAC GCTTATATTC GCAGCTATAA CAGTACCGGT AGGTTTGGCA TTGGGACTTA TTGTTGCAAC CGTTATGAAT AAATATGTAT ATTGCTCTGG ATTATTCAAA GTAATTGTTT TTATACCTTA TATCTCTAGT GTTGTAGCTT CGGTAATTGT ATGGCAGGTT ATGTTGCAGC CATCCTATGG ACCAATCAAT TCTATATTGA CTTCTTTAGG AATTTCAAAT CCGCCAAAGT GGTTTGTTGA TCCAAAATGG GCTATGCCAA CCATTATAAT ATTTCAAATA TGGCAGACAC TTGGCTATAA CGTAATCGTG TTTATGGCAG GCTTAAAAGG AATTTCAAGT GAGCTTTATG AAGCGGCATC CATTGATGGA GCCTCAGAAT TACGGAAGTT TAAAGATATA ACAATTCCTT TAATTTCACC TACAACGTTC TTCTTATCTA CCATGGGTAT CATTGGTTCG TTCAAAGTAT TTGATTCTAT CAGTGTTGCT ACGAAAGGCG GACCGGGAAA TGCAACTTCG GTCGTTGCGT TTTATATTTA CCGAGAAGCT TTTGAACTAT ATCGAATGGG AACCGCAAAT GCTGCAGCAT GGATTATGTT TATCATTATC TTTGTTGTTA CCATGATACA ACTTAGGGGA CAAAACAAAT GGGTTACTTA CGACTAA
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Protein sequence | MKTFVINKKR YIKNKHKDNL TAFLFLLPCL IGFVAFIVFP VVASLLLGFT EWNFLGGLKG IKFIGLDNFK TLLSGKDLWF NESFKNTLIF AAITVPVGLA LGLIVATVMN KYVYCSGLFK VIVFIPYISS VVASVIVWQV MLQPSYGPIN SILTSLGISN PPKWFVDPKW AMPTIIIFQI WQTLGYNVIV FMAGLKGISS ELYEAASIDG ASELRKFKDI TIPLISPTTF FLSTMGIIGS FKVFDSISVA TKGGPGNATS VVAFYIYREA FELYRMGTAN AAAWIMFIII FVVTMIQLRG QNKWVTYD
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