More than 300 homologs were found in PanDaTox collection
for query gene BURPS1710b_A1540 on replicon NC_007435
Organism: Burkholderia pseudomallei 1710b



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  100 
 
 
630 aa  1255    Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  100 
 
 
251 aa  520  1e-146  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  100 
 
 
251 aa  520  1e-146  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  99.6 
 
 
251 aa  518  1.0000000000000001e-145  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  99.2 
 
 
251 aa  516  1.0000000000000001e-145  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  99.6 
 
 
251 aa  518  1.0000000000000001e-145  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  99.6 
 
 
251 aa  518  1.0000000000000001e-145  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  99.6 
 
 
251 aa  518  1.0000000000000001e-145  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  90.08 
 
 
249 aa  465  9.999999999999999e-131  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  89.29 
 
 
249 aa  463  1e-129  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  90.48 
 
 
248 aa  465  1e-129  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  88.89 
 
 
248 aa  456  1e-127  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5737  Crp/FNR family transcriptional regulator  88.89 
 
 
248 aa  455  1.0000000000000001e-126  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.188641 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  86.51 
 
 
248 aa  454  1.0000000000000001e-126  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5122  Crp/FNR family transcriptional regulator  88.89 
 
 
248 aa  455  1.0000000000000001e-126  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0606  Crp/FNR family transcriptional regulator  69.36 
 
 
267 aa  342  1e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.149995 
 
 
-
 
NC_010676  Bphyt_4272  transcriptional regulator, Crp/Fnr family  72.02 
 
 
218 aa  335  1e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  0.71016  normal  0.563993 
 
 
-
 
NC_010623  Bphy_4433  Crp/FNR family transcriptional regulator  72.48 
 
 
224 aa  329  1.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0164  Crp/FNR family transcriptional regulator  55.69 
 
 
260 aa  281  3e-74  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1016  Crp/FNR family transcriptional regulator  55.69 
 
 
260 aa  281  3e-74  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2747  Crp/Fnr family transcriptional regulator  55.69 
 
 
260 aa  281  3e-74  Burkholderia pseudomallei 668  Bacteria  normal  0.225266  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2604  Crp/Fnr family transcriptional regulator  55.69 
 
 
260 aa  281  3e-74  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0460  Crp/FNR family transcriptional regulator  54.88 
 
 
260 aa  280  6e-74  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3812  Crp/FNR family transcriptional regulator  53.25 
 
 
257 aa  280  6e-74  Burkholderia ambifaria AMMD  Bacteria  normal  0.279241  normal  0.577974 
 
 
-
 
NC_010676  Bphyt_6315  transcriptional regulator, Crp/Fnr family  50.75 
 
 
403 aa  280  7e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4280  Crp/FNR family transcriptional regulator  53.25 
 
 
257 aa  280  7e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0900166 
 
 
-
 
NC_008784  BMASAVP1_1334  Crp/FNR family transcriptional regulator  56.49 
 
 
242 aa  279  1e-73  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0190  Crp/FNR family transcriptional regulator  56.49 
 
 
242 aa  279  1e-73  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5904  Crp/FNR family transcriptional regulator  52.73 
 
 
257 aa  278  2e-73  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.379633  normal  0.222249 
 
 
-
 
NC_009075  BURPS668_A1636  Crp/FNR family transcriptional regulator  56.52 
 
 
259 aa  278  2e-73  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6195  Crp/FNR family transcriptional regulator  52.33 
 
 
257 aa  278  2e-73  Burkholderia ambifaria MC40-6  Bacteria  normal  0.107166  normal  0.295507 
 
 
-
 
NC_007435  BURPS1710b_A0129  Crp/FNR family transcriptional regulator  56.52 
 
 
259 aa  278  3e-73  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1554  Crp/FNR family transcriptional regulator  56.52 
 
 
259 aa  278  3e-73  Burkholderia pseudomallei 1106a  Bacteria  normal  0.796955  n/a   
 
 
-
 
NC_010625  Bphy_5811  Crp/FNR family transcriptional regulator  53.69 
 
 
266 aa  275  1.0000000000000001e-72  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_007650  BTH_II1244  Crp/FNR family transcriptional regulator  55.7 
 
 
261 aa  273  7e-72  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5999  Crp/FNR family transcriptional regulator  52.36 
 
 
259 aa  270  8e-71  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.582695  normal 
 
 
-
 
NC_008543  Bcen2424_4355  Crp/FNR family transcriptional regulator  52.36 
 
 
259 aa  270  8e-71  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0811079  normal 
 
 
-
 
NC_008061  Bcen_4012  Crp/FNR family transcriptional regulator  52.36 
 
 
259 aa  270  8e-71  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1138  Crp/FNR family transcriptional regulator  51.65 
 
 
260 aa  266  5.999999999999999e-70  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1665  Crp/FNR family transcriptional regulator  51.36 
 
 
259 aa  264  4e-69  Burkholderia sp. 383  Bacteria  hitchhiker  0.00239618  normal  0.130389 
 
 
-
 
NC_010086  Bmul_4265  Crp/FNR family transcriptional regulator  50.78 
 
 
259 aa  263  4.999999999999999e-69  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.367581  normal  0.892156 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  54.89 
 
 
261 aa  262  1e-68  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  54.89 
 
 
261 aa  262  1e-68  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4238  Crp/FNR family transcriptional regulator  51.42 
 
 
257 aa  259  1e-67  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0460631  normal 
 
 
-
 
NC_008391  Bamb_3764  Crp/FNR family transcriptional regulator  52.16 
 
 
259 aa  257  5e-67  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0549839 
 
 
-
 
NC_011662  Tmz1t_1288  transcriptional regulator, Crp/Fnr family  52.91 
 
 
246 aa  248  2e-64  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  51.49 
 
 
245 aa  248  2e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_010002  Daci_2782  Crp/FNR family transcriptional regulator  48.81 
 
 
262 aa  246  9e-64  Delftia acidovorans SPH-1  Bacteria  normal  0.0680307  normal  0.414614 
 
 
-
 
NC_008752  Aave_1530  Crp/FNR family transcriptional regulator  52.02 
 
 
239 aa  242  1e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1047  cyclic nucleotide-binding: regulatory protein, Crp  49.17 
 
 
247 aa  241  2e-62  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1091  CRP/FNR family transcriptional regulator  51.57 
 
 
247 aa  242  2e-62  Acidovorax sp. JS42  Bacteria  normal  0.140321  normal 
 
 
-
 
NC_011992  Dtpsy_1007  transcriptional regulator, Crp/Fnr family  51.57 
 
 
242 aa  242  2e-62  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  52.47 
 
 
274 aa  238  2e-61  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2471  transcription factor Fnr  53.81 
 
 
269 aa  237  4e-61  Methylibium petroleiphilum PM1  Bacteria  normal  0.366844  normal  0.0435693 
 
 
-
 
NC_007948  Bpro_4294  Crp/FNR family transcriptional regulator  54.26 
 
 
272 aa  237  6e-61  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  49.36 
 
 
257 aa  232  1e-59  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_008781  Pnap_3775  CRP/FNR family transcriptional regulator  50 
 
 
265 aa  232  2e-59  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1163  CRP/FNR family transcriptional regulator  49.78 
 
 
251 aa  230  6e-59  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1207  Crp/FNR family transcriptional regulator  51.57 
 
 
264 aa  225  2e-57  Polaromonas sp. JS666  Bacteria  normal  0.494469  normal 
 
 
-
 
NC_003295  RSc0190  transcription regulator protein  44.98 
 
 
266 aa  222  9.999999999999999e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.180711 
 
 
-
 
NC_008781  Pnap_0792  CRP/FNR family transcriptional regulator  50 
 
 
262 aa  221  1.9999999999999999e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal 
 
 
-
 
NC_010678  Rpic_4428  transcriptional regulator, Crp/Fnr family  46.9 
 
 
263 aa  220  6e-56  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4561  transcriptional regulator, Crp/Fnr family  46.9 
 
 
263 aa  220  6e-56  Ralstonia pickettii 12D  Bacteria  normal  normal  0.291712 
 
 
-
 
NC_010506  Swoo_2417  fumarate/nitrate reduction transcriptional regulator  43.91 
 
 
249 aa  218  2e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0646393  decreased coverage  0.000000159166 
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  43.91 
 
 
249 aa  218  2e-55  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  45.29 
 
 
256 aa  218  2.9999999999999998e-55  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  46.19 
 
 
254 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1937  Crp/FNR family transcriptional regulator  49.05 
 
 
223 aa  215  1.9999999999999998e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.155753  n/a   
 
 
-
 
NC_007973  Rmet_2037  Crp/FNR family transcriptional regulator  46.82 
 
 
232 aa  214  2.9999999999999995e-54  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.441781 
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  43.48 
 
 
249 aa  214  2.9999999999999995e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  43.36 
 
 
252 aa  214  4.9999999999999996e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  41.22 
 
 
250 aa  213  7.999999999999999e-54  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  41.1 
 
 
253 aa  212  2e-53  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  43.5 
 
 
256 aa  212  2e-53  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  44.54 
 
 
250 aa  211  3e-53  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  42.92 
 
 
250 aa  210  7e-53  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  43.75 
 
 
239 aa  210  8e-53  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  42.92 
 
 
250 aa  210  8e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_009783  VIBHAR_02295  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
248 aa  209  1e-52  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  208  2e-52  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  42.48 
 
 
248 aa  208  2e-52  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  208  2e-52  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_007347  Reut_A2034  cyclic nucleotide-binding: regulatory protein, Crp  45.29 
 
 
232 aa  208  3e-52  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  208  3e-52  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  40.82 
 
 
250 aa  208  3e-52  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  42.48 
 
 
250 aa  207  5e-52  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_008709  Ping_0931  fumarate/nitrate reduction transcriptional regulator  41.7 
 
 
249 aa  207  5e-52  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.896198 
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  207  5e-52  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  207  5e-52  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  207  5e-52  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  207  5e-52  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  207  5e-52  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  40.41 
 
 
250 aa  207  7e-52  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  40.41 
 
 
250 aa  207  7e-52  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  40.41 
 
 
250 aa  207  7e-52  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  206  7e-52  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  40.41 
 
 
250 aa  207  7e-52  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  40.41 
 
 
250 aa  207  7e-52  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
254 aa  206  1e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  42.48 
 
 
250 aa  206  1e-51  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
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