Gene Bamb_3764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3764 
Symbol 
ID4312660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp624671 
End bp625450 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID638151606 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_775652 
Protein GI115358514 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0549839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCG CCACCGCCTT CGCCACCGCC CCGCCCGCCG CGGCTCGGCC ACCGATGCCG 
CTTCACGCGG TCGCACGCAC CGATACCGCC AAACATCCGG CCGCGCGCTG CTCAGTGTGC
GCGATGCGCT CGATGTGCCT GCCGCCCGAC CTGACCGCGG ACGAATACGG CCGCCTCGAC
GCGATCATCT GCTCGACCCG GCACGTTCGC CAGGGCGACT CTCTGTTCCG CACCGACGAC
CCGTTCCAGA GCATCTATGC GGTGCGCGCG GGCTCGTTCA AGACGGTGAT GATGCATCGC
GACGGCCGCG AGCACGTGAA CGGCTTCCAG ATCGCCGGCG AAACGCTCGG CATGGACGGC
ATCGGCACCG GCCGGCACTG TTGCGACGCG ATCGCGCTCG AGGACAGCGT CGTATGCATC
ATCCCGTTCG TCGCGCTCGA AGCCGCATGC CGCGAAATGA AATCGATGCA GCATTTTCTC
TATCAGATGC TGAGCAGCGA GATCGTCCGC GAATCGAGCC AGATGCTGCT GCTCGGCACG
ATGTCGGCCG AGCAGCGCGT CGCGCATTTC CTGCTGAACC TGTCGTCGCG CTTCGAGGCG
CGCGGTTATT CGGCATCGGA ATTCAACCTG CGGATGACGC GCGAGGAAAT CGGCTGCTAT
CTCGGCATGA AGCTCGAGAC GGTGAGCCGG ATGTTCTCGC GGTTCCATCG GGAGTCGCTC
GTCGAAACAC GCGGCAAGCG CGTGCGGATC ATCGACGCGC AGGCGCTCGC CCAGGTCTGA
 
Protein sequence
MSTATAFATA PPAAARPPMP LHAVARTDTA KHPAARCSVC AMRSMCLPPD LTADEYGRLD 
AIICSTRHVR QGDSLFRTDD PFQSIYAVRA GSFKTVMMHR DGREHVNGFQ IAGETLGMDG
IGTGRHCCDA IALEDSVVCI IPFVALEAAC REMKSMQHFL YQMLSSEIVR ESSQMLLLGT
MSAEQRVAHF LLNLSSRFEA RGYSASEFNL RMTREEIGCY LGMKLETVSR MFSRFHRESL
VETRGKRVRI IDAQALAQV