Gene Veis_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1163 
Symbol 
ID4691810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1287060 
End bp1287815 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID639848939 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_995953 
Protein GI121608146 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA TTCCCATTCC GGCCCATGTG CTCATGAACC CGCTCACCAT CAAAGTCGCC 
TGCTCCAACT GCAATCTGCG CGAGTTGTGC ATGCCCGTCG GGCTCAGCGA GCATCAGTTG
CAGCGCATCG ATGAAATGGT GGCCGTGCGC CGCAAGGTCA AACGCGGCGG GGCGCTGTTT
CGCAACGGCG AATCCTTCAC CTCGCTGTAC GCCATCCGCA CCGGTTTTTT CAAGACCTGT
GTGGCCACCG AGGATGGCCG CGACCAGGTC ACCGGCTTTC AGATGGCCGG CGAGATCATT
GGCCTGGACG GCATCGTCAA CGAGCGCCAC AGTTGCGACG CGGTGGCGCT GGAAGACGCC
GAGGTCTGCG TGATGCCGTT CGATCGCATC GAAGAGCTGT CGCGCGCGAT CCTGCCCTTG
CAGCACCATG TGCACAAGAT CATGAGCCGC GAAATCGTGC GCGAGCATGG CGTGATGCTG
CTGCTGGGCA GCATGCGCGC GGAAGAGCGG CTCGCGGTCT TCCTGTTGAA CATGGTGCAG
CGCCTGCATG CCCGCGGGTT CTCGTCATTC GAGCTGGTGC TGCGCATGAC GCGCGAGGAA
ATCGGCAGCT ACCTCGGCCT CAAGCTCGAA ACCGTGAGCC GGACTTTCTC CAAGTTTGTC
GAAGAAGGCA TCGTGCAGGT CAAACAGCGC CATGTGCGCA TCCTCGACGC CGATGCGCTC
AGGCGCATCA TCAGCAGCCA GCAGGCCTGT CACTGA
 
Protein sequence
MLGIPIPAHV LMNPLTIKVA CSNCNLRELC MPVGLSEHQL QRIDEMVAVR RKVKRGGALF 
RNGESFTSLY AIRTGFFKTC VATEDGRDQV TGFQMAGEII GLDGIVNERH SCDAVALEDA
EVCVMPFDRI EELSRAILPL QHHVHKIMSR EIVREHGVML LLGSMRAEER LAVFLLNMVQ
RLHARGFSSF ELVLRMTREE IGSYLGLKLE TVSRTFSKFV EEGIVQVKQR HVRILDADAL
RRIISSQQAC H