| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2417 |
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| Symbol | |
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| ID | 6116691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2963298 |
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| End bp | 2964047 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633925 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_001760790 |
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| Protein GI | 170726764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0646393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000159166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAGACA ACAATAAAAG TCGTCGTGCA GCTGTTCCAG GATGTGCTAT TCATTGTCAT
GATTGCAGTA TGGGGACCTT ATGTATCCCT TTTACCTTAA ATGCTACTGA ACTTGATCGT
CTTGACGAAA TCATTGAAAG AAAGAAGCCT ATTCAAAAAG GTGAGCAGAT CTTTAAGTCA
GGCGATACAT TAAAGTCTCT TTTTGCTATT CGCTCAGGTA CCATAAAAAG TTTTACAATC
ACCGAACAGG GTGATGAGCA GATCACAGGT TTTCATCTCG CCGGTGATGT GATTGGTTTT
GATGGTATTC ATGCCCAAGA ACATAAAAGT TTTGCTCAAG CATTAGAAAC CTCAATGGTG
TGTGAGATCC CCTTCTCTAC TCTAGATGAT CTCAGCGGCA CTATGCCTAA ACTCAGACAG
CAGATCATGC GATTGATGAG TAACGAGATC CAAAGCGACC AGGAGATGAT TCTTCTGCTA
AGTAAGAAGA ATGCGGAAGA GAGATTAGCA GCATTTATCA GTAATTTAGC TACTCGTTTT
GGCAGCCGAG GATTTTCACC AAAAGAGTTT AGGTTAACCA TGACTCGTGG CGATATCGGC
AACTATTTAG GGCTAACCGT AGAAACTATT AGCCGACTAT TAGGTCGCTT TCAAAAAGCT
GAGCTAATCG AAGTTAAGGG GAAGTACATT ACCATCGTTA ATTTCGATGC GTTAAATAAA
CTTGCCGGTA ACAGCGCCAT CGCTCGTTAA
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| Protein sequence | MTDNNKSRRA AVPGCAIHCH DCSMGTLCIP FTLNATELDR LDEIIERKKP IQKGEQIFKS
GDTLKSLFAI RSGTIKSFTI TEQGDEQITG FHLAGDVIGF DGIHAQEHKS FAQALETSMV
CEIPFSTLDD LSGTMPKLRQ QIMRLMSNEI QSDQEMILLL SKKNAEERLA AFISNLATRF
GSRGFSPKEF RLTMTRGDIG NYLGLTVETI SRLLGRFQKA ELIEVKGKYI TIVNFDALNK
LAGNSAIAR
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