Gene Daci_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2782 
Symbol 
ID5748358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3058844 
End bp3059632 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID641297877 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001563805 
Protein GI160898223 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0680307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.414614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCAAC TCATCGCAAT CCACGAGGTC ACCGCCGGCA CGCTGTGTGC CGCTGATGTT 
TATCACTCCA TGAACCTTCA GACCATCAAA GCCTCCTGCT CCAACTGCAA CCTGCGCGAA
CTGTGCATGC CCATGGGCCT GGATGCCGAG CAGATGCAGC GCATCGACGA CATCGTGGCC
ACGCGCCGCA AGGTCAAGCG CGGAGGCCTG CTGTTTCGCA ACGGCGAGAC ATTCACCTCG
CTGTACGCCA TCCGCACCGG CTTCTTCAAG ACCTGCGTGG CCACCGAGGA CGGACGCGAT
CAGGTCACAG GCTTTCAGAT GGCCGGCGAG ATCATCGGCC TGGACGGCAT CGTCAACGAC
CACCACACCT GCGATGCCGT CGCGCTGGAA GATGCCGAAG TCTGCGTCAT GCCCTTCGAC
AAGCTGGAAG ACCTGTCGCG CGAGGTCACG GCCCTGCAAA ACCATGTGCA CAAGGTCATG
AGCCGCGAGA TCGTGCGCGA GCACGGCGTG ATGCTGCTGC TGGGCAGCAT GCGCGCCGAA
GAGCGCCTGG CCGCCTTCGT GCTCAACCTG GTGCAGCGCC TGCATGCGCG GGGCTTTTCC
AAGTCCGAAC TGGTGCTGCG CATGACGCGC GAGGAAATCG GCAGCTACCT GGGCCTGAAG
CTGGAGACGG TGAGCCGCAC CTTCTCCAAG TTCGCGGACG ACAACATCAT CGAGGTGCGC
CAGCGCCATC TGCGCATCCT GGACACGGAT GCGCTCAAGC GCATCGTCAA CAGCCAGCAG
TGCCAGTGA
 
Protein sequence
MIQLIAIHEV TAGTLCAADV YHSMNLQTIK ASCSNCNLRE LCMPMGLDAE QMQRIDDIVA 
TRRKVKRGGL LFRNGETFTS LYAIRTGFFK TCVATEDGRD QVTGFQMAGE IIGLDGIVND
HHTCDAVALE DAEVCVMPFD KLEDLSREVT ALQNHVHKVM SREIVREHGV MLLLGSMRAE
ERLAAFVLNL VQRLHARGFS KSELVLRMTR EEIGSYLGLK LETVSRTFSK FADDNIIEVR
QRHLRILDTD ALKRIVNSQQ CQ