More than 300 homologs were found in PanDaTox collection
for query gene AFE_1584 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011761  AFE_1584  DNA-binding protein HU family protein  100 
 
 		 91 aa  185  1e-46  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000100307  n/a   
 
 
-
 
NC_011206  Lferr_1294  histone family protein DNA-binding protein  100 
 
 		 91 aa  185  1e-46  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000000180262  unclonable  0.000000000020236 
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  48.89 
 
 		 91 aa  84  7e-16  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_009636  Smed_0875  histone family protein DNA-binding protein  46.67 
 
 		 90 aa  83.6  8e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.757232  normal  1 
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  48.35 
 
 		 91 aa  83.2  0.000000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  44.94 
 
 		 90 aa  82.8  0.000000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.0802524 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  44.44 
 
 		 90 aa  82.4  0.000000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  46.15 
 
 		 91 aa  81.6  0.000000000000003  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  45.05 
 
 		 91 aa  79.7  0.00000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  43.33 
 
 		 90 aa  79.7  0.00000000000001  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  44.94 
 
 		 91 aa  80.1  0.00000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  43.33 
 
 		 90 aa  79.7  0.00000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  46.67 
 
 		 91 aa  79.3  0.00000000000001  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  43.33 
 
 		 90 aa  79.3  0.00000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  49.43 
 
 		 90 aa  79.3  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  42.22 
 
 		 92 aa  78.6  0.00000000000003  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  43.33 
 
 		 91 aa  78.6  0.00000000000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  78.2  0.00000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_004310  BR1105  DNA-binding protein HU  42.22 
 
 		 91 aa  77.4  0.00000000000006  Brucella suis 1330  Bacteria  normal  0.965912  n/a   
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  42.22 
 
 		 92 aa  77.4  0.00000000000006  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_012791  Vapar_4266  histone family protein DNA-binding protein  43.33 
 
 		 93 aa  77  0.00000000000007  Variovorax paradoxus S110  Bacteria  normal  0.598481  n/a   
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  43.33 
 
 		 90 aa  77  0.00000000000008  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal  1 
 
 
-
 
NC_013173  Dbac_2463  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  77  0.00000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0228112  n/a   
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  40.66 
 
 		 91 aa  77  0.00000000000008  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  77  0.00000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  42.7 
 
 		 91 aa  76.6  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_011369  Rleg2_1250  histone family protein DNA-binding protein  42.22 
 
 		 91 aa  76.3  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_1341  histone family protein DNA-binding protein  42.22 
 
 		 91 aa  76.6  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  42.22 
 
 		 91 aa  76.3  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal  1 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_011989  Avi_1701  HU-like DNA-binding protein alpha subunit  46.15 
 
 		 91 aa  75.5  0.0000000000002  Agrobacterium vitis S4  Bacteria  normal  0.512418  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp1826  hypothetical protein  40.45 
 
 		 92 aa  75.9  0.0000000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  40.45 
 
 		 92 aa  75.9  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  42.86 
 
 		 91 aa  75.5  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_009505  BOV_1064  DNA-binding protein HU  41.11 
 
 		 91 aa  75.5  0.0000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.203306  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  46.07 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  41.76 
 
 		 92 aa  75.5  0.0000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_003910  CPS_2063  HU family DNA-binding protein  40 
 
 		 91 aa  75.1  0.0000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.832344  n/a   
 
 
-
 
NC_012560  Avin_43920  histone-like DNA-binding protein  42.22 
 
 		 90 aa  74.7  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  40.45 
 
 		 90 aa  74.7  0.0000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  46.07 
 
 		 90 aa  74.7  0.0000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_009438  Sputcn32_3325  histone family protein DNA-binding protein  41.11 
 
 		 90 aa  74.3  0.0000000000005  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  41.11 
 
 		 91 aa  74.3  0.0000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  42.7 
 
 		 90 aa  74.3  0.0000000000005  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_003910  CPS_1873  HU family DNA-binding protein  42.22 
 
 		 91 aa  74.3  0.0000000000005  Colwellia psychrerythraea 34H  Bacteria  normal  0.972501  n/a   
 
 
-
 
NC_011663  Sbal223_3761  histone family protein DNA-binding protein  41.11 
 
 		 90 aa  74.3  0.0000000000005  Shewanella baltica OS223  Bacteria  normal  1  normal  0.768478 
 
 
-
 
NC_009997  Sbal195_3943  histone family protein DNA-binding protein  41.11 
 
 		 90 aa  74.3  0.0000000000005  Shewanella baltica OS195  Bacteria  normal  0.37618  normal  1 
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  74.3  0.0000000000005  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_009665  Shew185_3817  histone family protein DNA-binding protein  41.11 
 
 		 90 aa  74.3  0.0000000000005  Shewanella baltica OS185  Bacteria  normal  0.531766  n/a   
 
 
-
 
NC_009052  Sbal_0507  histone family protein DNA-binding protein  41.11 
 
 		 90 aa  74.3  0.0000000000005  Shewanella baltica OS155  Bacteria  normal  0.0267079  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  74.3  0.0000000000005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  38.89 
 
 		 91 aa  74.3  0.0000000000006  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  44.94 
 
 		 90 aa  73.9  0.0000000000006  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  44.94 
 
 		 90 aa  73.9  0.0000000000006  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  43.82 
 
 		 90 aa  73.9  0.0000000000006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  41.11 
 
 		 90 aa  73.9  0.0000000000007  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  41.11 
 
 		 90 aa  73.6  0.0000000000009  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_011769  DvMF_2029  histone family protein DNA-binding protein  41.94 
 
 		 95 aa  73.6  0.0000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_002950  PG0121  DNA-binding protein HU  41.46 
 
 		 88 aa  73.6  0.000000000001  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00022412 
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  44.94 
 
 		 90 aa  73.2  0.000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  43.82 
 
 		 90 aa  73.2  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  38.46 
 
 		 94 aa  73.2  0.000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  42.7 
 
 		 90 aa  73.2  0.000000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  40.66 
 
 		 96 aa  73.2  0.000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal  1 
 
 
-
 
NC_008254  Meso_1172  histone-like DNA-binding protein  40 
 
 		 90 aa  73.6  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  0.856335  n/a   
 
 
-
 
NC_008345  Sfri_3532  histone family protein DNA-binding protein  40 
 
 		 90 aa  73.2  0.000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  41.11 
 
 		 91 aa  73.2  0.000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  41.11 
 
 		 91 aa  73.2  0.000000000001  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  43.82 
 
 		 91 aa  73.2  0.000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_012856  Rpic12D_2386  histone family protein DNA-binding protein  40.91 
 
 		 94 aa  72.4  0.000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.405821  normal  1 
 
 
-
 
NC_003295  RSc2521  DNA-binding protein HU-beta  40.91 
 
 		 94 aa  72.4  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0944475  normal  0.0105947 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  44.44 
 
 		 90 aa  72  0.000000000002  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal  1 
 
 
-
 
NC_008609  Ppro_2665  histone family protein DNA-binding protein  43.68 
 
 		 91 aa  72  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.00920373  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  44.94 
 
 		 95 aa  72.4  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_010682  Rpic_2793  histone family protein DNA-binding protein  40.91 
 
 		 94 aa  72.4  0.000000000002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  37.78 
 
 		 91 aa  72.4  0.000000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  41.76 
 
 		 92 aa  72.8  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal  1 
 
 
-
 
NC_009441  Fjoh_0139  histone family protein DNA-binding protein  40 
 
 		 90 aa  72.4  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  41.76 
 
 		 91 aa  72  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  72.4  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  72.4  0.000000000002  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_008599  CFF8240_0846  DNA-binding protein HU  40.66 
 
 		 104 aa  72.4  0.000000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000034735  n/a   
 
 
-
 
NC_008700  Sama_3158  histone-like DNA-binding protein  38.89 
 
 		 90 aa  71.6  0.000000000003  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_1364  histone family protein DNA-binding protein  40.45 
 
 		 90 aa  72  0.000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  38.89 
 
 		 90 aa  71.6  0.000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  40 
 
 		 90 aa  72  0.000000000003  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_09623  probable DNA-binding protein HU  38.89 
 
 		 90 aa  71.6  0.000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.355669  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  41.57 
 
 		 90 aa  71.6  0.000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_008576  Mmc1_2054  histone family protein DNA-binding protein  40 
 
 		 91 aa  71.2  0.000000000004  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00333504  normal  0.0104655 
 
 
-
 
NC_008576  Mmc1_2824  nucleoid protein Hbs  40 
 
 		 91 aa  71.2  0.000000000004  Magnetococcus sp. MC-1  Bacteria  normal  0.669113  normal  1 
 
 
-
 
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