| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2521 |
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| Symbol | hupB2 |
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| ID | 1221368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2728266 |
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| End bp | 2728550 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637238922 |
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| Product | DNA-binding protein HU-beta |
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| Protein accession | NP_520642 |
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| Protein GI | 17547240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0944475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0105947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACCA AATCCGAACT CGTAGCCGCC ATTGCCAAAG ACGCTGAACT GAGCAACGCC
GCCGCCGAGC GCGCGCTGAA CTCCGCGCTG GAAAACATCA AGAAGACCGT CGCCAAGGGC
GGCACCATCA CCCTGGTTGG CTTCGGTTCG TTCTCGTCGG GCAAGCGTGC TGCGCGCACC
GGCCGTAACC CGCGCACCGG CGAAGCCATC AAGATCCCGG CGACCAAGAC CGTGAAGTTC
ACGGCTGGCA AGGGCTTCAA GGACGCCGTG AACAAGAAGA AGTAA
|
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| Protein sequence | MTTKSELVAA IAKDAELSNA AAERALNSAL ENIKKTVAKG GTITLVGFGS FSSGKRAART
GRNPRTGEAI KIPATKTVKF TAGKGFKDAV NKKK
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