More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_2824 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008576  Mmc1_2054  histone family protein DNA-binding protein  100 
 
 		 91 aa  178  2.9999999999999997e-44  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00333504  normal  0.0104655 
 
 
-
 
NC_008576  Mmc1_2824  nucleoid protein Hbs  100 
 
 		 91 aa  178  2.9999999999999997e-44  Magnetococcus sp. MC-1  Bacteria  normal  0.669113  normal  1 
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  72.22 
 
 		 91 aa  130  6.999999999999999e-30  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal  1 
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  62.64 
 
 		 91 aa  117  4.9999999999999996e-26  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  62.64 
 
 		 91 aa  117  4.9999999999999996e-26  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  57.78 
 
 		 90 aa  105  2e-22  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  58.89 
 
 		 90 aa  105  2e-22  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_010717  PXO_02474  DNA-binding protein HU  61.11 
 
 		 90 aa  105  3e-22  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  105  3e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  103  6e-22  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  58.24 
 
 		 94 aa  103  7e-22  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_011071  Smal_0839  histone family protein DNA-binding protein  64.44 
 
 		 90 aa  103  8e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0237084  normal  1 
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  57.78 
 
 		 90 aa  103  1e-21  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  60 
 
 		 90 aa  102  1e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  58.43 
 
 		 94 aa  102  2e-21  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  102  3e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  102  3e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  59.55 
 
 		 90 aa  102  3e-21  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_008576  Mmc1_0914  HU family DNA-binding protein  52.75 
 
 		 91 aa  101  3e-21  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  101  4e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_008345  Sfri_3532  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  100  8e-21  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  55.56 
 
 		 90 aa  99.8  1e-20  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  99.8  1e-20  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_004347  SO_0548  HU family DNA-binding protein  53.33 
 
 		 90 aa  99  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  99  2e-20  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  56.18 
 
 		 91 aa  98.2  3e-20  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  57.14 
 
 		 96 aa  98.6  3e-20  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  55.06 
 
 		 90 aa  98.2  3e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal  1 
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_008321  Shewmr4_0548  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  98.2  3e-20  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  98.2  3e-20  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  98.6  3e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  55.06 
 
 		 90 aa  98.2  4e-20  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  97.8  4e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  55.06 
 
 		 90 aa  98.2  4e-20  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  97.8  4e-20  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  97.8  4e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_0547  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  98.2  4e-20  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_3158  histone-like DNA-binding protein  55.56 
 
 		 90 aa  97.4  5e-20  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  57.78 
 
 		 90 aa  97.4  6e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  54.44 
 
 		 90 aa  97.4  6e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_3482  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.4  6e-20  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  55.06 
 
 		 90 aa  97.1  7e-20  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3761  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.1  8e-20  Shewanella baltica OS223  Bacteria  normal  1  normal  0.768478 
 
 
-
 
NC_009438  Sputcn32_3325  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.1  8e-20  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0507  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.1  8e-20  Shewanella baltica OS155  Bacteria  normal  0.0267079  n/a   
 
 
-
 
NC_009665  Shew185_3817  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.1  8e-20  Shewanella baltica OS185  Bacteria  normal  0.531766  n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  97.1  8e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_009997  Sbal195_3943  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  97.1  8e-20  Shewanella baltica OS195  Bacteria  normal  0.37618  normal  1 
 
 
-
 
NC_009656  PSPA7_3493  DNA-binding protein HU  56.67 
 
 		 90 aa  96.7  1e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.175993  n/a   
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  56.04 
 
 		 91 aa  96.3  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  57.78 
 
 		 90 aa  96.3  1e-19  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  96.7  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_010577  XfasM23_0470  histone family protein DNA-binding protein  56.18 
 
 		 94 aa  96.7  1e-19  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_008048  Sala_0799  histone-like DNA-binding protein  56.67 
 
 		 90 aa  96.3  1e-19  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.0173855 
 
 
-
 
NC_008463  PA14_41210  DNA-binding protein HU  56.67 
 
 		 90 aa  96.7  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0758892  normal  0.416187 
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  56.18 
 
 		 90 aa  95.5  2e-19  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  54.44 
 
 		 90 aa  95.9  2e-19  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_011206  Lferr_1035  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  95.5  2e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  decreased coverage  0.00000557803  hitchhiker  0.00000000462139 
 
 
-
 
NC_011761  AFE_0914  DNA-binding protein HU  53.33 
 
 		 90 aa  95.5  2e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.196839  n/a   
 
 
-
 
NC_009832  Spro_1098  histone family protein DNA-binding protein  53.33 
 
 		 101 aa  95.5  2e-19  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00970005  hitchhiker  0.00000236625 
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  55.56 
 
 		 91 aa  95.9  2e-19  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  95.5  2e-19  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal  1 
 
 
-
 
CP001509  ECD_03877  HU, DNA-binding transcriptional regulator, alpha subunit  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli BL21(DE3)  Bacteria  normal  0.380115  n/a   
 
 
-
 
CP001637  EcDH1_3994  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_4543  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli E24377A  Bacteria  normal  0.440082  n/a   
 
 
-
 
NC_012892  B21_03830  hypothetical protein  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli BL21  Bacteria  normal  0.485291  n/a   
 
 
-
 
NC_011353  ECH74115_5469  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.129609  normal  1 
 
 
-
 
NC_011094  SeSA_A0510  transcriptional regulator HU subunit beta  53.33 
 
 		 90 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0507646  normal  1 
 
 
-
 
NC_011312  VSAL_I2846  DNA-binding protein HU-alpha  54.44 
 
 		 90 aa  95.1  3e-19  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00368421  n/a   
 
 
-
 
NC_009505  BOV_1064  DNA-binding protein HU  54.95 
 
 		 91 aa  95.1  3e-19  Brucella ovis ATCC 25840  Bacteria  normal  0.203306  n/a   
 
 
-
 
NC_010498  EcSMS35_4448  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.302586  hitchhiker  0.00101008 
 
 
-
 
NC_011205  SeD_A0493  transcriptional regulator HU subunit beta  53.33 
 
 		 90 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.107938  normal  1 
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  95.1  3e-19  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_010658  SbBS512_E4491  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Shigella boydii CDC 3083-94  Bacteria  normal  0.0852675  n/a   
 
 
-
 
NC_011080  SNSL254_A0500  transcriptional regulator HU subunit beta  53.33 
 
 		 90 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.332585  normal  0.0268714 
 
 
-
 
NC_010468  EcolC_4025  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.0158227 
 
 
-
 
NC_009800  EcHS_A4234  transcriptional regulator HU subunit alpha  52.81 
 
 		 90 aa  95.1  3e-19  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2053  nucleoid protein HU beta subunit  55.56 
 
 		 90 aa  94.7  3e-19  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000457213  normal  0.0670315 
 
 
-
 
NC_011083  SeHA_C0554  transcriptional regulator HU subunit beta  53.33 
 
 		 90 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00736621  normal  1 
 
 
-
 
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