| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1873 |
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| Symbol | hupB1 |
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| ID | 3522908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1926929 |
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| End bp | 1927204 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637284335 |
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| Product | HU family DNA-binding protein |
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| Protein accession | YP_268603 |
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| Protein GI | 71282434 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.972501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAAA GTGAATTGGT AGAGAAAATC GCTGAAGGCG CAGACATTTC AAAAGCTTCA
GCTGGCCGTG CTTTAGATAG TTTAATTGGT TCTGTAACAA CTGAATTAGC TAATGGCGGT
GATGTCGCAT TAGTGGGTTT TGGTACTTAC AAAGTAAATG ACCGTGCTGC TCGTACAGGT
CGCAATCCTC AAACAGGTGC AGAGATCCAA ATTTCTGCGG CGAAAGTACC TGCTTTTAAA
GCGGGTAAAG CATTGAAAGA CGCAGTAAAC GTTTAG
|
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| Protein sequence | MNKSELVEKI AEGADISKAS AGRALDSLIG SVTTELANGG DVALVGFGTY KVNDRAARTG
RNPQTGAEIQ ISAAKVPAFK AGKALKDAVN V
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