42 homologs were found in PanDaTox collection
for query gene Veis_3354 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008786  Veis_3354  CopG family transcriptional regulator  100 
 
 		 90 aa  188  2.9999999999999997e-47  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.010277  normal  0.252149 
 
 
-
 
NC_002947  PP_2499  hypothetical protein  76.4 
 
 		 90 aa  146  9e-35  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012854  Rleg_6360  transcriptional regulator, CopG family  67.05 
 
 		 92 aa  126  8.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_3515  CopG family transcriptional regulator  53.41 
 
 		 94 aa  108  3e-23  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1797  CopG family transcriptional regulator  53.41 
 
 		 94 aa  107  4.0000000000000004e-23  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.50125 
 
 
-
 
NC_010552  BamMC406_4372  CopG family transcriptional regulator  57.3 
 
 		 92 aa  107  6e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  0.98164  normal  1 
 
 
-
 
NC_008322  Shewmr7_1769  CopG family transcriptional regulator  53.41 
 
 		 94 aa  106  1e-22  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.731285 
 
 
-
 
NC_008321  Shewmr4_1692  CopG family transcriptional regulator  52.27 
 
 		 94 aa  103  9e-22  Shewanella sp. MR-4  Bacteria  normal  0.542112  normal  0.0225811 
 
 
-
 
NC_009832  Spro_0926  CopG family transcriptional regulator  50 
 
 		 92 aa  100  8e-21  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013421  Pecwa_0502  transcriptional regulator, CopG family  49.44 
 
 		 96 aa  97.8  4e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_1445  CopG family transcriptional regulator  52.44 
 
 		 102 aa  97.1  8e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_0423  transcriptional regulator, CopG family  46.07 
 
 		 96 aa  91.3  4e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.416536  n/a   
 
 
-
 
NC_008786  Veis_2427  CopG family transcriptional regulator  47.73 
 
 		 100 aa  90.1  8e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2575  CopG family transcriptional regulator  42.05 
 
 		 97 aa  82  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.888914  n/a   
 
 
-
 
NC_009704  YpsIP31758_A0043  hypothetical protein  37.93 
 
 		 96 aa  77.4  0.00000000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1249  transcriptional regulator-like protein  42.35 
 
 		 121 aa  77  0.00000000000009  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000553131  n/a   
 
 
-
 
NC_010717  PXO_00427  transcriptional regulator, HTH motif containing  54.1 
 
 		 61 aa  75.5  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_1216  hypothetical protein  35.29 
 
 		 89 aa  59.7  0.00000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.676541  n/a   
 
 
-
 
NC_010831  Cphamn1_0140  hypothetical protein  33.72 
 
 		 118 aa  59.3  0.00000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.736337 
 
 
-
 
NC_011060  Ppha_0145  hypothetical protein  32.94 
 
 		 89 aa  57.8  0.00000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.399898  n/a   
 
 
-
 
NC_010803  Clim_0112  hypothetical protein  31.76 
 
 		 89 aa  54.3  0.0000005  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_0805  hypothetical protein  31.76 
 
 		 89 aa  53.1  0.000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.113601  normal  1 
 
 
-
 
NC_007512  Plut_0979  hypothetical protein  35.71 
 
 		 256 aa  48.1  0.00004  Chlorobium luteolum DSM 273  Bacteria  normal  0.346318  normal  1 
 
 
-
 
NC_007519  Dde_2904  CopG family transcriptional regulator  26.44 
 
 		 94 aa  43.1  0.001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.0000144196  n/a   
 
 
-
 
NC_006348  BMA2965  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0460419  n/a   
 
 
-
 
NC_007434  BURPS1710b_0166  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.996666  n/a   
 
 
-
 
NC_009080  BMA10247_3026  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_4032  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A1576  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.388891  n/a   
 
 
-
 
NC_007651  BTH_I3301  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia thailandensis E264  Bacteria  normal  0.621303  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3345  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42.4  0.002  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_3958  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  41.46 
 
 		 1309 aa  42  0.003  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5941  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  43.18 
 
 		 1345 aa  41.6  0.004  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3294  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  41.2  0.005  Burkholderia sp. 383  Bacteria  normal  0.129835  normal  1 
 
 
-
 
NC_010084  Bmul_0114  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010508  Bcenmc03_0128  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_0112  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_2942  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.343978  n/a   
 
 
-
 
NC_008542  Bcen2424_0113  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008390  Bamb_0103  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  39.02 
 
 		 1310 aa  40.8  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_1541  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  33.33 
 
 		 1320 aa  40.8  0.007  Enterobacter sp. 638  Bacteria  normal  1  normal  0.174773 
 
 
-
 
NC_009439  Pmen_2208  CopG family transcriptional regulator  30.26 
 
 		 90 aa  40  0.009  Pseudomonas mendocina ymp  Bacteria  normal  0.901295  normal  0.042561 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>