Gene BURPS668_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3958 
SymbolputA 
ID4883358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3860090 
End bp3864019 
Gene Length3930 bp 
Protein Length1309 aa 
Translation table11 
GC content70% 
IMG OID640129886 
Producttrifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001060951 
Protein GI126439272 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCA CCACACTGGG CGTCAAAGTC GACGATCTGC TGCGCTCGCG TCTGAAGGAC 
GCGGCGTCGC GGCTCGAGCG CACTCCTCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT
CTCGAGCGGA TCGAGCATGG TCAGCTTCCG CCGGAGCTCT CCGGCCACAC GGGCGTCGCC
GATCTGTCCG ACAGCCACGC CGACGGCGAC GACGACGGCG CGCCGCACCC GTTCCTCGAA
TTCGCGCAGA GCGTGCAGCC GCAGTCGGTG CTGCGCGCGG CGATCACGGC CGCGTACCGG
CGGCCGGAGC CCGAATGCGT GCCGTTCCTG ATCGGCGAGG CGCGGCTGCC CGCGAGCCTC
GCGTCGGACG TGCAGGCAAT GGCGGCGGGC CTCGTCGAGG CGCTGCGCGA GAAGAGCTCG
GGCGGCGGCG TCGAGGGGCT GATCCATGAA TTCTCGCTGT CGAGCCAGGA GGGCGTCGCG
CTGATGTGCC TCGCCGAGGC GCTGCTGCGG ATTCCCGATC GCGCGACGCG CGACGCGCTG
ATTCGCGACA AGATCAGCAA GGGCGACTGG CGCTCGCACG TCGGCCACGC GCCGTCGCTG
TTCGTCAACG CGGCCACCTG GGGCCTGATG ATCACCGGCA AGCTCGTCAC GACGAACAGC
GAGGCGGGCC TGTCGTCGGC GCTCACGCGG CTGATCGGCA AGGGCGGCGA GCCGTTGATC
CGAAAGGGCG TCGACATGGC GATGCGCCTG ATGGGCGAGC AGTTCGTCAC GGGCGAGACG
ATCTCCGAAG CGCTCGCGAA CAGCCGCAAG TACGAGGCGC GCGGCTTCCG CTACTCGTAC
GACATGCTCG GCGAAGCGGC GACCACCGAA GAGGACGCGC TGCGCTACTA CGCGTCGTAC
GAGCAGGCGA TCCACGCGAT CGGCAAGGCG GCGGGCGGCC GCGGCATTTA CGAGGGCCCG
GGCATCTCGA TCAAGCTCTC GGCGCTGCAT GCGCGCTACT CGCGCTCCCA GCAGGAACGC
ACGATGAACG AGCTGCTGCC GCGCGTGCGC TCGCTCGCGC TGCTCGCGCG CCGCTATGAC
ATCGGCCTGA ACATCGACGC CGAGGAGGCG GACCGGCTCG AGCTCTCGCT CGATCTGCTC
GAGGCGCTGT GCTTCGATCC GGAACTCGCC GGCTGGAACG GCATCGGCTT CGTCGTGCAG
GCGTACCAGA AGCGCTGCCC GTTCGTGATC GACTACCTTG TCGACCTCGC GCGCCGCAGC
CGCCATCGCC TGATGATCCG CCTCGTGAAG GGCGCGTACT GGGATTCCGA GATCAAGCGC
GCGCAGGTGG ACGGCCTCGA AGGCTATCCG GTCTATACGC GCAAGATCTA CACCGACGTG
TCCTACCTCG CGTGCGCGAA GAAGCTGCTC GCCGCGCCGG ACGCCGTGTA TCCGCAGTTC
GCGACGCACA ACGCGTACAC GCTCGCCGCG ATCTATCACC TCGCGGGCCA GAACTACTAC
CCCGGCCAGT ACGAGTTCCA GTGCCTGCAC GGGATGGGCG AGCCGCTGTA CGAGGAAGTC
ACCGGCCGCG ACAAGCTGAA CCGCCCATGC CGCGTGTACG CGCCCGTCGG CACGCACGAG
ACGCTGCTTG CGTATCTCGT GCGCCGCCTG CTGGAAAACG GCGCGAACAC GTCGTTCGTG
AACCGGATCG CCGACAAGAC CGTGTCGGTG AAGGAACTGG TGGCCGATCC GGTCGAGGAT
GCGCTGAAGG TCGTGCCGCT CGGCGCGCCG CACACGAAGA TTGCGCTGCC GCGCGAGCTG
TACGGCGCGT CGCGCGTCAA TTCGATGGGC CTCGATCTGT CGAACGAGCA CCGGCTCGCG
TCGCTGTCGT CGGCGCTGCT CGCGAGCGCG CATCATCCGT GGCGCGCCGC GCCGATGCTC
GCCGACGACG CGCTCGCCCA CGCCGCGCCG CGCGACGTGC GCAATCCGGC CGATCTGCGC
GACGTCGTCG GCACGGTGAG CGAAGCGACG CCCGACGAGG TGAGCGCGGC GCTCGCGCAC
GCGGTCGCGG CCGCGCCGAT CTGGCAGGCG ACGCCCGTCG ACGCGCGCGC GGACTGCCTC
GCGCGCGCGG CGGACCTGCT CGAAGCGCAG ATGCACACGC TGATGGGCCT GATCGTGCGC
GAGGCGGGCA AATCGCTGCC GAACGCGATC GCCGAGATCC GCGAAGCGGT CGATTTCCTG
CGCTACTACT CGGCGCAGAT CCGCGACGAA TTCTCGAACG ACACGCACCG CCCGCTCGGC
CCCGTCGTCT GCATCAGCCC GTGGAACTTC CCGCTCGCGA TCTTCATGGG CCAGGTCGCA
GCCGCCCTGG CGGCGGGCAA CACGGTGCTC GCGAAGCCGG CCGAGCAGAC GCCGCTGATC
GCCGCGCAGG CGGTGCGCCT GCTGCGCGAC GCCGGCGTGC CGGCGGGCGC GGTGCAACTG
CTGCCGGGCA ACGGCGAGAC GGTGGGCGCG GCGCTCGTGG CGGACCCCCG CACGCGCGCG
GTGATGTTCA CCGGCTCGAC CGAAGTCGCG CGCCTCATCA ACAAGACGCT GTCGTCGCGC
CTCGATCCGG ACGGCAGGCC GATCCCGCTG ATCGCCGAGA CGGGCGGCCA GAACGCGATG
ATCGTCGATT CGTCGGCGCT CGCCGAGCAG GTGGTCGCCG ACGTGCTGCA GTCGTCGTTC
GACTCGGCCG GTCAACGCTG TTCGGCGCTG CGCGTTCTGT GTCTGCAGGA CGACGTCGCG
GATCGCACGC TGACGATGCT CAAGGGCGCG ATGCGCGAGC TCGCGCTCGG CAATCCGGAC
CGGCTGTCGG TGGACGTCGG CCCGGTGATC GACGCCGACG CGAAGCGCAC GATCGACACG
CACATCGCGG CGATGAAGGA CAAGGGGCAC GCGGTCACGC AGCTCGAGAT GCCGGACGCA
TGCGCGCAGG GCACGTTCGT GCCGCCGACG ATCATCGAGA TCGGCAACGT CGACGAGCTC
AAGCGTGAAG TGTTCGGCCC GGTGCTGCAC GTCGTGCGTT ATCGCCGCAG CGGCCTCGAC
AAGCTGCTCG AGCAGATCCG CGCGACGGGC TATGGGCTCA CGCTCGGCAT TCACACGCGG
ATCGACGAGA CGATCGCGCA CGTGATCTCG CGCGCGCACG TCGGCAACAT CTACGTGAAC
CGCAACGTGA TCGGCGCGGT GGTGGGCGTG CAGCCGTTCG GCGGCGAAGG GCTGTCGGGC
ACGGGGCCGA AGGCGGGCGG CGCGCTCTAC TTGCAGCGCC TGCTCGCGAC GCGCCCGGCC
GGGCTGCCGC GCTCGCTCGA GGCGGCGCTC GTCGCCGATG CGCCGCAGGA AGGCGAGACG
CGCGATAATC CATCCGCTGC GCTCACCGCG CTGCGCGACT GGCTGATCGA GCAGCGCGAG
CCGGCGCTCG CCGCGCGCTG CGACGGCTAT CTGTCGCACG TGCTCGCGGG CGCAACCGCC
GTGCTTTCAG GGCCGACGGG CGAGCGCAAT ACGTATACAC TCGGCGCGCG CGGCACGGTG
CTGTGCATCG CGGCGACGGC AAGCGGCGCG CGCGCGCAGT TCGCCGCGGC GCTCGCCACC
GGCAACCGCG CGCTTTTCGC GGGCGCGGCG GGCGAGGCGC TCGTCGCGGC GCTGCCGGCG
CAACTGAAGG CGCACGCGGG CGTGAGAAAG CAGGCGGACG CGGCGTTCGA CGCGGTGCTG
TTCGAAGGCG ACAGCGACGA GTTGCTCGCG CTCGTGAAGG AAGTCGCGCA GCGCCCGGGG
CCGATCGTGT CGGTGCAGGG CGTCGCGGCG GGCGCGTTCG AGAACGGCGG CGACGAAGAC
TACGCGCTCG AGCGGCTCCT CACCGAGCGC TCGGTGAGCG TGAACACCGC GGCGGCAGGC
GGCAATGCGA ATTTGATGAC GATTGGCTGA
 
Protein sequence
MASTTLGVKV DDLLRSRLKD AASRLERTPH WLIKQAIFAY LERIEHGQLP PELSGHTGVA 
DLSDSHADGD DDGAPHPFLE FAQSVQPQSV LRAAITAAYR RPEPECVPFL IGEARLPASL
ASDVQAMAAG LVEALREKSS GGGVEGLIHE FSLSSQEGVA LMCLAEALLR IPDRATRDAL
IRDKISKGDW RSHVGHAPSL FVNAATWGLM ITGKLVTTNS EAGLSSALTR LIGKGGEPLI
RKGVDMAMRL MGEQFVTGET ISEALANSRK YEARGFRYSY DMLGEAATTE EDALRYYASY
EQAIHAIGKA AGGRGIYEGP GISIKLSALH ARYSRSQQER TMNELLPRVR SLALLARRYD
IGLNIDAEEA DRLELSLDLL EALCFDPELA GWNGIGFVVQ AYQKRCPFVI DYLVDLARRS
RHRLMIRLVK GAYWDSEIKR AQVDGLEGYP VYTRKIYTDV SYLACAKKLL AAPDAVYPQF
ATHNAYTLAA IYHLAGQNYY PGQYEFQCLH GMGEPLYEEV TGRDKLNRPC RVYAPVGTHE
TLLAYLVRRL LENGANTSFV NRIADKTVSV KELVADPVED ALKVVPLGAP HTKIALPREL
YGASRVNSMG LDLSNEHRLA SLSSALLASA HHPWRAAPML ADDALAHAAP RDVRNPADLR
DVVGTVSEAT PDEVSAALAH AVAAAPIWQA TPVDARADCL ARAADLLEAQ MHTLMGLIVR
EAGKSLPNAI AEIREAVDFL RYYSAQIRDE FSNDTHRPLG PVVCISPWNF PLAIFMGQVA
AALAAGNTVL AKPAEQTPLI AAQAVRLLRD AGVPAGAVQL LPGNGETVGA ALVADPRTRA
VMFTGSTEVA RLINKTLSSR LDPDGRPIPL IAETGGQNAM IVDSSALAEQ VVADVLQSSF
DSAGQRCSAL RVLCLQDDVA DRTLTMLKGA MRELALGNPD RLSVDVGPVI DADAKRTIDT
HIAAMKDKGH AVTQLEMPDA CAQGTFVPPT IIEIGNVDEL KREVFGPVLH VVRYRRSGLD
KLLEQIRATG YGLTLGIHTR IDETIAHVIS RAHVGNIYVN RNVIGAVVGV QPFGGEGLSG
TGPKAGGALY LQRLLATRPA GLPRSLEAAL VADAPQEGET RDNPSAALTA LRDWLIEQRE
PALAARCDGY LSHVLAGATA VLSGPTGERN TYTLGARGTV LCIAATASGA RAQFAAALAT
GNRALFAGAA GEALVAALPA QLKAHAGVRK QADAAFDAVL FEGDSDELLA LVKEVAQRPG
PIVSVQGVAA GAFENGGDED YALERLLTER SVSVNTAAAG GNANLMTIG