Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3958 |
Symbol | putA |
ID | 4883358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3860090 |
End bp | 3864019 |
Gene Length | 3930 bp |
Protein Length | 1309 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640129886 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001060951 |
Protein GI | 126439272 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAGCA CCACACTGGG CGTCAAAGTC GACGATCTGC TGCGCTCGCG TCTGAAGGAC GCGGCGTCGC GGCTCGAGCG CACTCCTCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT CTCGAGCGGA TCGAGCATGG TCAGCTTCCG CCGGAGCTCT CCGGCCACAC GGGCGTCGCC GATCTGTCCG ACAGCCACGC CGACGGCGAC GACGACGGCG CGCCGCACCC GTTCCTCGAA TTCGCGCAGA GCGTGCAGCC GCAGTCGGTG CTGCGCGCGG CGATCACGGC CGCGTACCGG CGGCCGGAGC CCGAATGCGT GCCGTTCCTG ATCGGCGAGG CGCGGCTGCC CGCGAGCCTC GCGTCGGACG TGCAGGCAAT GGCGGCGGGC CTCGTCGAGG CGCTGCGCGA GAAGAGCTCG GGCGGCGGCG TCGAGGGGCT GATCCATGAA TTCTCGCTGT CGAGCCAGGA GGGCGTCGCG CTGATGTGCC TCGCCGAGGC GCTGCTGCGG ATTCCCGATC GCGCGACGCG CGACGCGCTG ATTCGCGACA AGATCAGCAA GGGCGACTGG CGCTCGCACG TCGGCCACGC GCCGTCGCTG TTCGTCAACG CGGCCACCTG GGGCCTGATG ATCACCGGCA AGCTCGTCAC GACGAACAGC GAGGCGGGCC TGTCGTCGGC GCTCACGCGG CTGATCGGCA AGGGCGGCGA GCCGTTGATC CGAAAGGGCG TCGACATGGC GATGCGCCTG ATGGGCGAGC AGTTCGTCAC GGGCGAGACG ATCTCCGAAG CGCTCGCGAA CAGCCGCAAG TACGAGGCGC GCGGCTTCCG CTACTCGTAC GACATGCTCG GCGAAGCGGC GACCACCGAA GAGGACGCGC TGCGCTACTA CGCGTCGTAC GAGCAGGCGA TCCACGCGAT CGGCAAGGCG GCGGGCGGCC GCGGCATTTA CGAGGGCCCG GGCATCTCGA TCAAGCTCTC GGCGCTGCAT GCGCGCTACT CGCGCTCCCA GCAGGAACGC ACGATGAACG AGCTGCTGCC GCGCGTGCGC TCGCTCGCGC TGCTCGCGCG CCGCTATGAC ATCGGCCTGA ACATCGACGC CGAGGAGGCG GACCGGCTCG AGCTCTCGCT CGATCTGCTC GAGGCGCTGT GCTTCGATCC GGAACTCGCC GGCTGGAACG GCATCGGCTT CGTCGTGCAG GCGTACCAGA AGCGCTGCCC GTTCGTGATC GACTACCTTG TCGACCTCGC GCGCCGCAGC CGCCATCGCC TGATGATCCG CCTCGTGAAG GGCGCGTACT GGGATTCCGA GATCAAGCGC GCGCAGGTGG ACGGCCTCGA AGGCTATCCG GTCTATACGC GCAAGATCTA CACCGACGTG TCCTACCTCG CGTGCGCGAA GAAGCTGCTC GCCGCGCCGG ACGCCGTGTA TCCGCAGTTC GCGACGCACA ACGCGTACAC GCTCGCCGCG ATCTATCACC TCGCGGGCCA GAACTACTAC CCCGGCCAGT ACGAGTTCCA GTGCCTGCAC GGGATGGGCG AGCCGCTGTA CGAGGAAGTC ACCGGCCGCG ACAAGCTGAA CCGCCCATGC CGCGTGTACG CGCCCGTCGG CACGCACGAG ACGCTGCTTG CGTATCTCGT GCGCCGCCTG CTGGAAAACG GCGCGAACAC GTCGTTCGTG AACCGGATCG CCGACAAGAC CGTGTCGGTG AAGGAACTGG TGGCCGATCC GGTCGAGGAT GCGCTGAAGG TCGTGCCGCT CGGCGCGCCG CACACGAAGA TTGCGCTGCC GCGCGAGCTG TACGGCGCGT CGCGCGTCAA TTCGATGGGC CTCGATCTGT CGAACGAGCA CCGGCTCGCG TCGCTGTCGT CGGCGCTGCT CGCGAGCGCG CATCATCCGT GGCGCGCCGC GCCGATGCTC GCCGACGACG CGCTCGCCCA CGCCGCGCCG CGCGACGTGC GCAATCCGGC CGATCTGCGC GACGTCGTCG GCACGGTGAG CGAAGCGACG CCCGACGAGG TGAGCGCGGC GCTCGCGCAC GCGGTCGCGG CCGCGCCGAT CTGGCAGGCG ACGCCCGTCG ACGCGCGCGC GGACTGCCTC GCGCGCGCGG CGGACCTGCT CGAAGCGCAG ATGCACACGC TGATGGGCCT GATCGTGCGC GAGGCGGGCA AATCGCTGCC GAACGCGATC GCCGAGATCC GCGAAGCGGT CGATTTCCTG CGCTACTACT CGGCGCAGAT CCGCGACGAA TTCTCGAACG ACACGCACCG CCCGCTCGGC CCCGTCGTCT GCATCAGCCC GTGGAACTTC CCGCTCGCGA TCTTCATGGG CCAGGTCGCA GCCGCCCTGG CGGCGGGCAA CACGGTGCTC GCGAAGCCGG CCGAGCAGAC GCCGCTGATC GCCGCGCAGG CGGTGCGCCT GCTGCGCGAC GCCGGCGTGC CGGCGGGCGC GGTGCAACTG CTGCCGGGCA ACGGCGAGAC GGTGGGCGCG GCGCTCGTGG CGGACCCCCG CACGCGCGCG GTGATGTTCA CCGGCTCGAC CGAAGTCGCG CGCCTCATCA ACAAGACGCT GTCGTCGCGC CTCGATCCGG ACGGCAGGCC GATCCCGCTG ATCGCCGAGA CGGGCGGCCA GAACGCGATG ATCGTCGATT CGTCGGCGCT CGCCGAGCAG GTGGTCGCCG ACGTGCTGCA GTCGTCGTTC GACTCGGCCG GTCAACGCTG TTCGGCGCTG CGCGTTCTGT GTCTGCAGGA CGACGTCGCG GATCGCACGC TGACGATGCT CAAGGGCGCG ATGCGCGAGC TCGCGCTCGG CAATCCGGAC CGGCTGTCGG TGGACGTCGG CCCGGTGATC GACGCCGACG CGAAGCGCAC GATCGACACG CACATCGCGG CGATGAAGGA CAAGGGGCAC GCGGTCACGC AGCTCGAGAT GCCGGACGCA TGCGCGCAGG GCACGTTCGT GCCGCCGACG ATCATCGAGA TCGGCAACGT CGACGAGCTC AAGCGTGAAG TGTTCGGCCC GGTGCTGCAC GTCGTGCGTT ATCGCCGCAG CGGCCTCGAC AAGCTGCTCG AGCAGATCCG CGCGACGGGC TATGGGCTCA CGCTCGGCAT TCACACGCGG ATCGACGAGA CGATCGCGCA CGTGATCTCG CGCGCGCACG TCGGCAACAT CTACGTGAAC CGCAACGTGA TCGGCGCGGT GGTGGGCGTG CAGCCGTTCG GCGGCGAAGG GCTGTCGGGC ACGGGGCCGA AGGCGGGCGG CGCGCTCTAC TTGCAGCGCC TGCTCGCGAC GCGCCCGGCC GGGCTGCCGC GCTCGCTCGA GGCGGCGCTC GTCGCCGATG CGCCGCAGGA AGGCGAGACG CGCGATAATC CATCCGCTGC GCTCACCGCG CTGCGCGACT GGCTGATCGA GCAGCGCGAG CCGGCGCTCG CCGCGCGCTG CGACGGCTAT CTGTCGCACG TGCTCGCGGG CGCAACCGCC GTGCTTTCAG GGCCGACGGG CGAGCGCAAT ACGTATACAC TCGGCGCGCG CGGCACGGTG CTGTGCATCG CGGCGACGGC AAGCGGCGCG CGCGCGCAGT TCGCCGCGGC GCTCGCCACC GGCAACCGCG CGCTTTTCGC GGGCGCGGCG GGCGAGGCGC TCGTCGCGGC GCTGCCGGCG CAACTGAAGG CGCACGCGGG CGTGAGAAAG CAGGCGGACG CGGCGTTCGA CGCGGTGCTG TTCGAAGGCG ACAGCGACGA GTTGCTCGCG CTCGTGAAGG AAGTCGCGCA GCGCCCGGGG CCGATCGTGT CGGTGCAGGG CGTCGCGGCG GGCGCGTTCG AGAACGGCGG CGACGAAGAC TACGCGCTCG AGCGGCTCCT CACCGAGCGC TCGGTGAGCG TGAACACCGC GGCGGCAGGC GGCAATGCGA ATTTGATGAC GATTGGCTGA
|
Protein sequence | MASTTLGVKV DDLLRSRLKD AASRLERTPH WLIKQAIFAY LERIEHGQLP PELSGHTGVA DLSDSHADGD DDGAPHPFLE FAQSVQPQSV LRAAITAAYR RPEPECVPFL IGEARLPASL ASDVQAMAAG LVEALREKSS GGGVEGLIHE FSLSSQEGVA LMCLAEALLR IPDRATRDAL IRDKISKGDW RSHVGHAPSL FVNAATWGLM ITGKLVTTNS EAGLSSALTR LIGKGGEPLI RKGVDMAMRL MGEQFVTGET ISEALANSRK YEARGFRYSY DMLGEAATTE EDALRYYASY EQAIHAIGKA AGGRGIYEGP GISIKLSALH ARYSRSQQER TMNELLPRVR SLALLARRYD IGLNIDAEEA DRLELSLDLL EALCFDPELA GWNGIGFVVQ AYQKRCPFVI DYLVDLARRS RHRLMIRLVK GAYWDSEIKR AQVDGLEGYP VYTRKIYTDV SYLACAKKLL AAPDAVYPQF ATHNAYTLAA IYHLAGQNYY PGQYEFQCLH GMGEPLYEEV TGRDKLNRPC RVYAPVGTHE TLLAYLVRRL LENGANTSFV NRIADKTVSV KELVADPVED ALKVVPLGAP HTKIALPREL YGASRVNSMG LDLSNEHRLA SLSSALLASA HHPWRAAPML ADDALAHAAP RDVRNPADLR DVVGTVSEAT PDEVSAALAH AVAAAPIWQA TPVDARADCL ARAADLLEAQ MHTLMGLIVR EAGKSLPNAI AEIREAVDFL RYYSAQIRDE FSNDTHRPLG PVVCISPWNF PLAIFMGQVA AALAAGNTVL AKPAEQTPLI AAQAVRLLRD AGVPAGAVQL LPGNGETVGA ALVADPRTRA VMFTGSTEVA RLINKTLSSR LDPDGRPIPL IAETGGQNAM IVDSSALAEQ VVADVLQSSF DSAGQRCSAL RVLCLQDDVA DRTLTMLKGA MRELALGNPD RLSVDVGPVI DADAKRTIDT HIAAMKDKGH AVTQLEMPDA CAQGTFVPPT IIEIGNVDEL KREVFGPVLH VVRYRRSGLD KLLEQIRATG YGLTLGIHTR IDETIAHVIS RAHVGNIYVN RNVIGAVVGV QPFGGEGLSG TGPKAGGALY LQRLLATRPA GLPRSLEAAL VADAPQEGET RDNPSAALTA LRDWLIEQRE PALAARCDGY LSHVLAGATA VLSGPTGERN TYTLGARGTV LCIAATASGA RAQFAAALAT GNRALFAGAA GEALVAALPA QLKAHAGVRK QADAAFDAVL FEGDSDELLA LVKEVAQRPG PIVSVQGVAA GAFENGGDED YALERLLTER SVSVNTAAAG GNANLMTIG
|
| |