Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0103 |
Symbol | putA |
ID | 4311231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 116822 |
End bp | 120754 |
Gene Length | 3933 bp |
Protein Length | 1310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638147881 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_771998 |
Protein GI | 115350159 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCA CGACTCTCGG CGTCAAAGTC GACGACCTTC TCCGCTCGCG CCTGAAAGAC GCGGCCGCGC GTCTCGAGCG CACTCCCCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT CTCGAGCGGA TCGAGCACGG CCAGTTGCCG CCCGAGCTGT CGGGCCACAG CGGCGTGACG GAGCTCGCCG ACGGTCAGGC GACGGACAGC GACGACGACA ACTCGCCGCA TCCGTTCCTC GAGTTCGCGC AGAACGTGCA GCCGCAATCG GTGCTGCGCG CGGCGATCAC GGCCGCGTAT CGCCGACCCG AGCCGGAATG CGTGCCGTTC CTGCTGGGCC AGGCGCGCCT GCCGGCCAAC TTGCAAGCGG ACGCGCAGGC GCTCGCGACG ACGCTCGTCG AGGCGCTGCG CGAGAAGAAC TCGGGCGGCG GCGTCGAAGG GCTGATCCAC GAGTTCTCGC TGTCGAGCCA GGAAGGCGTC GCGCTGATGT GTCTCGCCGA AGCGCTGCTG CGCATCCCCG ATCGCGCGAC GCGCGATGCG CTGATCCGCG ACAAGATCAG CAAGGGCGAC TGGCGCTCGC ACGTCGGCCA CGCGCCGTCG CTGTTCGTGA ACGCGGCGAC CTGGGGGCTG ATGATCACCG GCAAGCTCGT GACGACCAAC AGCGAAGCGG GCCTGTCGTC GGCGCTCACG CGCCTGATCG GCCGCGGCGG CGAGCCGCTG ATCCGCAAGG GCGTCGACAT GGCGATGCGC CTGATGGGCG AGCAGTTCGT CACCGGCGAG ACGATTTCCG AGGCGCTCGC GAACAGCCGC AAGTACGAAG CGCGCGGCTT CCGCTACTCG TACGACATGC TCGGCGAAGC GGCGACGACC GAAGAGGACG CGCTGCGCTA CTACGCGTCG TACGAGCAGG CGATCCACGC GATCGGCAAG GCGGCCGGCG GCCGCGGCAT CTACGAAGGC CCGGGCATCT CGATCAAGCT GTCGGCGCTG CACGCGCGCT ACGCGCGCTC GCAGCAGGAC CGCACGATGA GCGAGCTGCT GCCGCGCGTG CGCGCGCTGG CGCTGCTCGC GCGTCGCTAT GACATCGGCC TGAACATCGA CGCGGAAGAA GCCGACCGTC TCGAACTGTC GCTCGACCTG CTCGAGGCGC TGTGCTTCGA TCCGGAGCTC GCGGGCTGGA ACGGCATCGG CTTCGTCGTG CAGGGATACC AGAAGCGCTG CCCGTTCGTG ATCGACTACC TGATCGATCT CGCGCGCCGC AGCCGTCACC GCCTGATGAT CCGCCTGGTC AAGGGCGCGT ACTGGGACAG CGAAATCAAG CGCGCGCAGG TCGACGGCCT CGAAGGCTAT CCGGTCTACA CGCGCAAGAT CTACACGGAC GTGTCCTACC TCGCGTGCGC GAAGAAGCTG CTCGCGGCGC CGGACGCCGT CTACCCGCAG TTCGCGACGC ACAACGCGTA CACGCTGGCC GCGATCTATC ACCTCGCCGG CCACAACTAC TACCCGGGCC AGTACGAATT CCAGTGCCTG CACGGGATGG GCGAGCCGCT GTACGAGGAA GTCACGGGCC GCGACAAGCT GAACCGCCCG TGCCGCGTGT ACGCGCCGGT CGGCACGCAT GAAACGCTGC TCGCGTACCT GGTGCGCCGC CTGCTGGAGA ACGGCGCGAA CACGTCGTTC GTGAACCGCA TCGCCGATAA GACCGTGTCG GTGAAGGAAC TGGTCGCCGA TCCGGTCGAC GAGGCGTCGA AGGTCGTGCC GCTCGGCGCG CCGCACGCGA AGATCCCGCT GCCGCGCCAC CTGTACGGCG ACGAGCGTCC CAACTCGATG GGCCTCGACC TGTCGAACGA ACACCGCCTC GCGTCGCTGT CGTCCGCGCT GCTCGCGAGT GCGCATCATC CGTGGCGCGC GGCGCCGATG CTCGCCGACG ACGCGCTCGC CGACGCACCG GCGCGCGACG TGCGCAACCC GGCCGACCTG CGCGACGTGG TCGGCACGGT CAGCGAAGCG ACGGCCGAAC ACGTGAGCGC GGCGCTCGCG CATGCGGTGG CTGCCGCGCC GATCTGGCAG GCGACGCCGG TCGATGCGCG CGCCGACTGC CTGGTGCGCG CGGCCGACCT GCTCGAAGCG CAGATGCACA CGCTAATGGG TCTGATCGTG CGCGAGGCCG GCAAGTCGCT GCCGAACGCG ATCGCCGAAA TCCGCGAGGC CGTCGACTTC CTGCGCTACT ACGCGGCGCA GATCCGCGAC GAATTCTCGA ACGACACGCA CCGTCCGCTC GGCCCCGTGG TCTGCATCAG CCCGTGGAAC TTCCCGCTCG CGATCTTCAT GGGCCAGGTG GCCGCTGCAC TGGCAGCCGG CAATACGGTG CTCGCGAAGC CGGCCGAACA GACGCCGCTG ATCGCCGCAC AAGCCGTGCG CCTGCTGCGC GAGGCCGGCG TGCCGGCCGG CGCGGTGCAG TTGCTGCCGG GCACCGGCGA GACCGTCGGC GCGGCGCTGG TCGCCGATTC GCGCACGCGC GCGGTGATGT TCACCGGCTC GACCGAAGTG GCGCGCCTGA TCAACAAGAC GCTGTCCGCG CGCCTCGACC CGGACGGCAA GCCGATTCCG CTGATCGCGG AAACGGGCGG CCAGAACGCG ATGATCGTCG ACTCGTCGGC GCTCGCGGAG CAGGTGGTCG CGGACGTGCT GCAGTCGTCG TTCGACTCGG CCGGTCAACG GTGTTCGGCG CTGCGCGTTC TGTGTCTGCA GGACGACGTC GCGGACCGCA CGCTGACGAT GCTCAAGGGC GCGATGCACG AGCTGGCGCT CGGCAACCCG GACCGTTTGT CGACCGACGT CGGCCCGGTG ATCGACGCCG AAGCGAAGCA GACGATCGAC ACGCACGTCG CGACGATGAC GGACAAGGGC CACACGGTCA CGCAGCTGCC GGCGCCGGAA GCCTGTGCGC ACGGTACGTT CGTGCCGCCG ACGCTGATCG AGATCGGCAG CATCGACGAG CTCAAGCGCG AGGTGTTCGG CCCCGTGCTG CACGTCGTGC GCTACCGCCG CAATCAACTC GACAAGCTGC TCGAGCAGAT CCGCGCGACC GGTTACGGGC TGACGCTCGG CATCCATACG CGGATCGACG AGACGATCGC GCACGTGATC TCGAACGCGC ACGTCGGCAA CATCTACGTG AACCGCAACG TGATCGGCGC GGTGGTCGGC GTGCAGCCGT TCGGCGGCGA AGGGCTATCG GGTACGGGCC CGAAGGCCGG CGGCGCGCTG TACCTGCAGC GCCTGCTCGC GACGCGTCCG TCGGGCCTGC CGCGCTCGCT CGCGCAGATG CTGATCGCGG ACGGCGCGGT CGAAGGCGAC TCGCGCGGCA ACCCGGCGGC GGCGCTCACC GCGCTGCGCG ACTGGCTGAT CGAGCAGCGC GAACCGGCGC TGGCCGCGCG CTGCGACGGC TATCTGGCGC AGGTGCCGGC CGGCGCGACC GCGGTGCTGA CCGGCCCGAC GGGCGAGCGA AACACGTATA CACTCGGCCC GCGCGGCACG GTGCTGTGCG TCGCGGCGAC GCCGAGCGGT GCGCGTGCGC AGTTCGCGGC GGTGCTGGCG ACGGGCAACC GCGCATTGTT CGCCGGTGCG GCGGGCGAGG CGCTGGTCGC GGCGCTGCCG GCCGCGCTGA AGGCGCATGC GGCCGTGCGC AAGCAGCCCG ACGCGCCGTT CGACGCGGTG CTGTTCGAAG GCGACAGCGA CGAACTGCAG ACGCTCGTGA AGGACGTCGC GCAGCGGCCG GGCCCGATCG TGTCGGTGCA GGGCGTGTCG GCGGGCGCGT TCGAGAACGG CGACGCGGAA GACTACGCGC TCGAGCGGCT GCTGACCGAG CGCTCGGTCA GCGTGAACAC GGCCGCGGCG GGCGGCAATG CGAATTTGAT GACGATCGGC TGA
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Protein sequence | MASTTLGVKV DDLLRSRLKD AAARLERTPH WLIKQAIFAY LERIEHGQLP PELSGHSGVT ELADGQATDS DDDNSPHPFL EFAQNVQPQS VLRAAITAAY RRPEPECVPF LLGQARLPAN LQADAQALAT TLVEALREKN SGGGVEGLIH EFSLSSQEGV ALMCLAEALL RIPDRATRDA LIRDKISKGD WRSHVGHAPS LFVNAATWGL MITGKLVTTN SEAGLSSALT RLIGRGGEPL IRKGVDMAMR LMGEQFVTGE TISEALANSR KYEARGFRYS YDMLGEAATT EEDALRYYAS YEQAIHAIGK AAGGRGIYEG PGISIKLSAL HARYARSQQD RTMSELLPRV RALALLARRY DIGLNIDAEE ADRLELSLDL LEALCFDPEL AGWNGIGFVV QGYQKRCPFV IDYLIDLARR SRHRLMIRLV KGAYWDSEIK RAQVDGLEGY PVYTRKIYTD VSYLACAKKL LAAPDAVYPQ FATHNAYTLA AIYHLAGHNY YPGQYEFQCL HGMGEPLYEE VTGRDKLNRP CRVYAPVGTH ETLLAYLVRR LLENGANTSF VNRIADKTVS VKELVADPVD EASKVVPLGA PHAKIPLPRH LYGDERPNSM GLDLSNEHRL ASLSSALLAS AHHPWRAAPM LADDALADAP ARDVRNPADL RDVVGTVSEA TAEHVSAALA HAVAAAPIWQ ATPVDARADC LVRAADLLEA QMHTLMGLIV REAGKSLPNA IAEIREAVDF LRYYAAQIRD EFSNDTHRPL GPVVCISPWN FPLAIFMGQV AAALAAGNTV LAKPAEQTPL IAAQAVRLLR EAGVPAGAVQ LLPGTGETVG AALVADSRTR AVMFTGSTEV ARLINKTLSA RLDPDGKPIP LIAETGGQNA MIVDSSALAE QVVADVLQSS FDSAGQRCSA LRVLCLQDDV ADRTLTMLKG AMHELALGNP DRLSTDVGPV IDAEAKQTID THVATMTDKG HTVTQLPAPE ACAHGTFVPP TLIEIGSIDE LKREVFGPVL HVVRYRRNQL DKLLEQIRAT GYGLTLGIHT RIDETIAHVI SNAHVGNIYV NRNVIGAVVG VQPFGGEGLS GTGPKAGGAL YLQRLLATRP SGLPRSLAQM LIADGAVEGD SRGNPAAALT ALRDWLIEQR EPALAARCDG YLAQVPAGAT AVLTGPTGER NTYTLGPRGT VLCVAATPSG ARAQFAAVLA TGNRALFAGA AGEALVAALP AALKAHAAVR KQPDAPFDAV LFEGDSDELQ TLVKDVAQRP GPIVSVQGVS AGAFENGDAE DYALERLLTE RSVSVNTAAA GGNANLMTIG
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