30 homologs were found in PanDaTox collection
for query gene Spro_0926 on replicon NC_009832
Organism: Serratia proteamaculans 568



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_0926  CopG family transcriptional regulator  100 
 
 
92 aa  187  2.9999999999999997e-47  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2427  CopG family transcriptional regulator  57.89 
 
 
100 aa  114  3.9999999999999997e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6360  transcriptional regulator, CopG family  54.35 
 
 
92 aa  108  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2499  hypothetical protein  55.06 
 
 
90 aa  107  5e-23  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4372  CopG family transcriptional regulator  59.09 
 
 
92 aa  107  6e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  0.98164  normal 
 
 
-
 
NC_008786  Veis_3354  CopG family transcriptional regulator  50 
 
 
90 aa  100  8e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.010277  normal  0.252149 
 
 
-
 
NC_008322  Shewmr7_1769  CopG family transcriptional regulator  52.22 
 
 
94 aa  100  1e-20  Shewanella sp. MR-7  Bacteria  normal  normal  0.731285 
 
 
-
 
NC_009438  Sputcn32_3515  CopG family transcriptional regulator  52.27 
 
 
94 aa  99  2e-20  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1797  CopG family transcriptional regulator  52.27 
 
 
94 aa  98.6  3e-20  Shewanella sp. ANA-3  Bacteria  normal  normal  0.50125 
 
 
-
 
NC_008321  Shewmr4_1692  CopG family transcriptional regulator  50.57 
 
 
94 aa  94.4  4e-19  Shewanella sp. MR-4  Bacteria  normal  0.542112  normal  0.0225811 
 
 
-
 
NC_004347  SO_1445  CopG family transcriptional regulator  58.33 
 
 
102 aa  92  2e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009704  YpsIP31758_A0043  hypothetical protein  43.82 
 
 
96 aa  89.7  1e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2575  CopG family transcriptional regulator  46.59 
 
 
97 aa  88.2  3e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.888914  n/a   
 
 
-
 
NC_013421  Pecwa_0502  transcriptional regulator, CopG family  48.28 
 
 
96 aa  87  7e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0423  transcriptional regulator, CopG family  45.98 
 
 
96 aa  80.9  0.000000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.416536  n/a   
 
 
-
 
NC_010717  PXO_00427  transcriptional regulator, HTH motif containing  58.33 
 
 
61 aa  75.5  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0112  hypothetical protein  36.36 
 
 
89 aa  67.4  0.00000000007  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1216  hypothetical protein  36.36 
 
 
89 aa  67  0.00000000008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.676541  n/a   
 
 
-
 
NC_009483  Gura_1249  transcriptional regulator-like protein  34.83 
 
 
121 aa  67  0.00000000008  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000553131  n/a   
 
 
-
 
NC_010831  Cphamn1_0140  hypothetical protein  33.71 
 
 
118 aa  66.2  0.0000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.736337 
 
 
-
 
NC_011060  Ppha_0145  hypothetical protein  34.09 
 
 
89 aa  65.1  0.0000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.399898  n/a   
 
 
-
 
NC_010831  Cphamn1_0805  hypothetical protein  35.23 
 
 
89 aa  62.8  0.000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.113601  normal 
 
 
-
 
NC_007512  Plut_0979  hypothetical protein  37.08 
 
 
256 aa  57.4  0.00000007  Chlorobium luteolum DSM 273  Bacteria  normal  0.346318  normal 
 
 
-
 
NC_007908  Rfer_2811  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  36.36 
 
 
1361 aa  41.6  0.003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0113  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0103  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0128  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0112  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2942  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.343978  n/a   
 
 
-
 
NC_007510  Bcep18194_A3294  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40 
 
 
1310 aa  40.8  0.006  Burkholderia sp. 383  Bacteria  normal  0.129835  normal 
 
 
-
 
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