| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0113 |
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| Symbol | putA |
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| ID | 4450399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 117943 |
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| End bp | 121875 |
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| Gene Length | 3933 bp |
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| Protein Length | 1310 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639692120 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_833760 |
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| Protein GI | 116688137 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCA CGACTCTCGG CGTCAAAGTC GACGACCTTC TCCGCTCGCG CCTGAAAGAC
GCGGCGGCGC GTCTCGAGCG CACTCCCCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT
CTCGAGCGGA TCGAGCACGG CCAGCTGCCG CCCGAGCTGT CGGGCCACAG CGGCGTGACG
GAGCTCGCCG ACGGTCAGGC AACGGACGGC GACGACGACA ACTCGCCGCA TCCGTTCCTC
GAGTTCGCGC AGAACGTGCA GCCGCAATCG GTGCTGCGCG CGGCGATCAC GGCCGCGTAC
CGCCGTCCGG AGCCGGAGTG CGTGCCGTTC CTGCTCGGCC AGGCGCGCCT GCCCGCGAAC
CTGCAGGCGG ACGTGCAGGC GCTCGCGACG AAGCTGGTCG AGGCGCTGCG CGAGAAGAGC
TCGGGCGGCG GCGTCGAAGG GCTGATCCAC GAGTTCTCGC TGTCGAGCCA GGAAGGCGTC
GCGCTGATGT GCCTCGCCGA AGCGCTGCTG CGCATTCCCG ATCGCGCGAC GCGCGATGCG
CTGATCCGCG ACAAGATCAG CAAGGGCGAC TGGCGCTCGC ACGTCGGCCA CGCGCCATCG
CTGTTCGTGA ACGCGGCGAC CTGGGGGCTG ATGATCACCG GCAAGCTCGT GACGACCAAC
AGCGAAGCGG GCCTGTCGTC GGCGCTCACG CGCCTGATCG GCCGCGGCGG CGAGCCGCTG
ATCCGCAAGG GCGTCGACAT GGCGATGCGC CTGATGGGCG AGCAGTTCGT CACCGGCGAA
ACGATTTCCG AAGCGCTCGC GAACAGCCGC AAGTACGAAG CGCGCGGCTT TCGCTACTCG
TACGACATGC TCGGCGAAGC GGCGACGACC GAAGAGGACG CACAGCGCTA CTACGCGTCG
TACGAACAGG CGATCCACGC GATCGGCAAG GCGGCCGGCG GCCGCGGCAT CTACGAAGGC
CCGGGCATCT CGATCAAGCT GTCGGCGCTG CATGCGCGCT ACTCGCGTTC GCAGCAGGAC
CGCACGATGA GCGAGCTGCT GCCGCGCGTG CGTGCGCTGG CGCTGCTCGC GCGCCGCTAC
GACATCGGCC TGAACATCGA CGCGGAAGAG GCCGACCGTC TCGAACTGTC GCTCGACCTG
CTCGAGGCGC TGTGCTTCGA TCCGGAGCTC GCGGGCTGGA ACGGCATCGG CTTCGTCGTG
CAGGGCTACC AGAAGCGCTG CCCGTTCGTG ATCGACTACC TGATCGATCT CGCGCGCCGC
AGCCGTCACC GCCTGATGAT CCGCCTCGTG AAGGGCGCGT ACTGGGACAG CGAGATCAAG
CGGGCGCAGG TCGACGGCCT CGAAGGCTAT CCGGTCTACA CGCGCAAGAT CTACACCGAC
GTGTCGTACC TCGCGTGCGC GAAGAAGCTG CTCGGAGCGC CGGACGCCGT CTACCCGCAA
TTCGCGACGC ACAACGCGCA CACGCTGGCC GCGATCTATC ACCTGGCCGG CCAGAACTAC
TACCCGGGCC AGTACGAATT CCAGTGCCTG CACGGGATGG GCGAGCCGCT CTACGAGGAA
GTCACGGGCC GCGACAAGCT GAATCGTCCG TGCCGCGTGT ACGCACCGGT CGGCACGCAC
GAGACGCTGC TCGCGTATCT CGTGCGCCGT TTGCTGGAAA ACGGCGCGAA CACGTCGTTC
GTGAACCGCA TTGCGGATAA AACCGTGCCG GTGAAGGAGC TGGTCGCCGA TCCGGTCGAC
GAAGCGTCGA AGGTCGTGCC GCTCGGCGCG CCGCACGCGA AGATCCCGCT GCCGCGCAAC
CTGTACGGCG ACGAGCGTCC CAACTCGATG GGCCTCGACC TGTCGAACGA ACATCGTCTC
GCGTCGCTGT CGTCCGCGCT GCTCGCGAGC GCGCACCACC CGTGGCGCGC GGCGCCGATG
CTCGCCGACG ACGCGCTCGC CGACGCGCCG GCGCGCGACG TGCGCAACCC GGCCGACCAG
CGCGACGTGG TCGGCACGGT CAGCGAAGCG ACGTCCGAGC ACGTGAGCGC GGCGCTCGCG
CATGCGGTGG CCGCCGCGCC GATCTGGCAG GCGACGCCGG TCGACGCACG CGCCGATTGC
CTGGTGCGCG CCGCTGACCT CCTCGAAGCG CAGATGCACA CGCTGATGGG CCTGATCGTG
CGCGAAGCCG GCAAGTCGCT GCCGAACGCG ATCGCCGAAA TCCGCGAAGC GGTCGACTTC
CTGCGCTATT ACGCGGCGCA GATCCGCGGC GAATTCTCGA ACGACACGCA CCGTCCGCTC
GGCCCCGTGG TCTGTATCAG CCCGTGGAAC TTCCCGCTCG CGATCTTCAT GGGCCAGGTG
GCCGCGGCGC TCGCCGCCGG CAACACGGTG CTCGCGAAGC CGGCCGAACA GACGCCGCTG
ATCGCCGCGC AGGCCGTGCG CCTCTTGCGC GAGGCCGGCG TGCCGGCCGG CGCGGTGCAA
CTGCTGCCGG GCACCGGCGA GACCGTCGGC GCGGCGCTGG TCGCCGATCC GCGCACCCGG
GCGGTGATGT TCACCGGTTC GACCGAAGTC GCGCGCCTGA TCAACAAGAC GCTCGCCGCG
CGCCTCGACC CGGACGGCAA GCCGATTCCG CTGATCGCCG AAACGGGCGG CCAGAACGCG
ATGATCGTCG ACTCGTCGGC GCTCGCGGAG CAGGTCGTCG CGGACGTGAT GCAGTCGTCG
TTCGACTCGG CCGGTCAACG GTGTTCGGCG CTGCGCGTTC TGTGTCTGCA GGACGACGTC
GCGGACCGCA CGCTGACGAT GCTCAAGGGC GCGATGCACG AGCTGGCGCT CGGCAACCCG
GACCGGCTGT CGACCGACGT TGGCCCGGTG ATCGACGCCG AAGCGAAGCA GACGATCGAC
ACGCACGTCG CGGCGATGAA GGACAAGGGC CACGCGGTCA CGCAACTGCC GATGCCCGAC
GCGTGCGCGC ACGGCACGTT CGTGCCGCCG ACGCTGATCG AGATCGGCAG CATCGACGAG
CTGAAGCGTG AAGTGTTCGG CCCCGTGCTG CACGTGGTGC GCTACCGCCG CAGCCAGCTC
GACAAGCTGC TCGAGCAGAT CCGCGCGACC GGCTACGGGC TGACGCTCGG CATTCACACG
CGGATCGACG AGACGATCGC GCACGTGATC TCGAATGCGC ACGTGGGCAA CATCTACGTG
AACCGCAACG TGATCGGCGC GGTGGTCGGC GTGCAGCCGT TCGGCGGCGA AGGGCTGTCG
GGCACGGGCC CGAAGGCCGG CGGCGCGCTG TACCTGCAGC GCCTGCTCGC GACGCGTCCG
TCGGGCCTGC CGCGCGCGCT CGCGCAGTCG CTGGTGGCGG ACGGCGCGAC CGAAAGCGAT
GCGCGCGGCA ACCCGGCGGC GGCGCTCACG ACGCTGCGCG ACTGGCTGAT CGAGCAGCGC
GAGCCGGCGC TGGCCGCGCG TTGCGACGGC TACCTCGCGC AGGTGCCGGC CGGCGCGACC
GCGGTGCTGA GCGGTCCGAC GGGCGAGCGA AACACGTATA CACTCGGCCC GCGCGGCACG
GTGCTGTGTG TCGCGGCGAC GCCCGGCGGC GCGCGTGCGC AGTTCGCGGC GGTGCTGGCG
ACGGGCAACC GTGCGTTGTT CGCCGGCGCG GCGGGCGAGG CGCTGGTCGC CGCGCTGCCG
GCGTCGCTGA AGGCGCACGC GGCCGTGCGC AAGCAGGCCG ACGCGCCGTT CGACGCGGTG
CTGTTCGAAG GCGACAGCGA CGAACTGCAG ACGCTCGTGA AGGACGTCGC GCAGCGGCCG
GGCCCGATCG TGTCGGTGCA GGGCGTGTCG GCGGGCGCGT TCGAGAACGG CGATGCGGAA
GACTACGCGC TCGAGCGGCT GCTGACGGAA CGCTCGGTGA GCGTGAATAC GGCCGCGGCG
GGCGGCAATG CGAATTTGAT GACGATCGGC TGA
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| Protein sequence | MASTTLGVKV DDLLRSRLKD AAARLERTPH WLIKQAIFAY LERIEHGQLP PELSGHSGVT
ELADGQATDG DDDNSPHPFL EFAQNVQPQS VLRAAITAAY RRPEPECVPF LLGQARLPAN
LQADVQALAT KLVEALREKS SGGGVEGLIH EFSLSSQEGV ALMCLAEALL RIPDRATRDA
LIRDKISKGD WRSHVGHAPS LFVNAATWGL MITGKLVTTN SEAGLSSALT RLIGRGGEPL
IRKGVDMAMR LMGEQFVTGE TISEALANSR KYEARGFRYS YDMLGEAATT EEDAQRYYAS
YEQAIHAIGK AAGGRGIYEG PGISIKLSAL HARYSRSQQD RTMSELLPRV RALALLARRY
DIGLNIDAEE ADRLELSLDL LEALCFDPEL AGWNGIGFVV QGYQKRCPFV IDYLIDLARR
SRHRLMIRLV KGAYWDSEIK RAQVDGLEGY PVYTRKIYTD VSYLACAKKL LGAPDAVYPQ
FATHNAHTLA AIYHLAGQNY YPGQYEFQCL HGMGEPLYEE VTGRDKLNRP CRVYAPVGTH
ETLLAYLVRR LLENGANTSF VNRIADKTVP VKELVADPVD EASKVVPLGA PHAKIPLPRN
LYGDERPNSM GLDLSNEHRL ASLSSALLAS AHHPWRAAPM LADDALADAP ARDVRNPADQ
RDVVGTVSEA TSEHVSAALA HAVAAAPIWQ ATPVDARADC LVRAADLLEA QMHTLMGLIV
REAGKSLPNA IAEIREAVDF LRYYAAQIRG EFSNDTHRPL GPVVCISPWN FPLAIFMGQV
AAALAAGNTV LAKPAEQTPL IAAQAVRLLR EAGVPAGAVQ LLPGTGETVG AALVADPRTR
AVMFTGSTEV ARLINKTLAA RLDPDGKPIP LIAETGGQNA MIVDSSALAE QVVADVMQSS
FDSAGQRCSA LRVLCLQDDV ADRTLTMLKG AMHELALGNP DRLSTDVGPV IDAEAKQTID
THVAAMKDKG HAVTQLPMPD ACAHGTFVPP TLIEIGSIDE LKREVFGPVL HVVRYRRSQL
DKLLEQIRAT GYGLTLGIHT RIDETIAHVI SNAHVGNIYV NRNVIGAVVG VQPFGGEGLS
GTGPKAGGAL YLQRLLATRP SGLPRALAQS LVADGATESD ARGNPAAALT TLRDWLIEQR
EPALAARCDG YLAQVPAGAT AVLSGPTGER NTYTLGPRGT VLCVAATPGG ARAQFAAVLA
TGNRALFAGA AGEALVAALP ASLKAHAAVR KQADAPFDAV LFEGDSDELQ TLVKDVAQRP
GPIVSVQGVS AGAFENGDAE DYALERLLTE RSVSVNTAAA GGNANLMTIG
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