Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2942 |
Symbol | putA |
ID | 4093613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 3245143 |
End bp | 3249075 |
Gene Length | 3933 bp |
Protein Length | 1310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638016237 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_622811 |
Protein GI | 162218045 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.343978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCA CGACTCTCGG CGTCAAAGTC GACGACCTTC TCCGCTCGCG CCTGAAAGAC GCGGCGGCGC GTCTCGAGCG CACTCCCCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT CTCGAGCGGA TCGAGCACGG CCAGCTGCCG CCCGAGCTGT CGGGCCACAG CGGCGTGACG GAGCTCGCCG ACGGTCAGGC AACGGACGGC GACGACGACA ACTCGCCGCA TCCGTTCCTC GAGTTCGCGC AGAACGTGCA GCCGCAATCG GTGCTGCGCG CGGCGATCAC GGCCGCGTAC CGCCGTCCGG AGCCGGAGTG CGTGCCGTTC CTGCTCGGCC AGGCGCGCCT GCCCGCGAAC CTGCAGGCGG ACGTGCAGGC GCTCGCGACG AAGCTGGTCG AGGCGCTGCG CGAGAAGAGC TCGGGCGGCG GCGTCGAAGG GCTGATCCAC GAGTTCTCGC TGTCGAGCCA GGAAGGCGTC GCGCTGATGT GCCTCGCCGA AGCGCTGCTG CGCATTCCCG ATCGCGCGAC GCGCGATGCG CTGATCCGCG ACAAGATCAG CAAGGGCGAC TGGCGCTCGC ACGTCGGCCA CGCGCCATCG CTGTTCGTGA ACGCGGCGAC CTGGGGGCTG ATGATCACCG GCAAGCTCGT GACGACCAAC AGCGAAGCGG GCCTGTCGTC GGCGCTCACG CGCCTGATCG GCCGCGGCGG CGAGCCGCTG ATCCGCAAGG GCGTCGACAT GGCGATGCGC CTGATGGGCG AGCAGTTCGT CACCGGCGAA ACGATTTCCG AAGCGCTCGC GAACAGCCGC AAGTACGAAG CGCGCGGCTT TCGCTACTCG TACGACATGC TCGGCGAAGC GGCGACGACC GAAGAGGACG CACAGCGCTA CTACGCGTCG TACGAACAGG CGATCCACGC GATCGGCAAG GCGGCCGGCG GCCGCGGCAT CTACGAAGGC CCGGGCATCT CGATCAAGCT GTCGGCGCTG CATGCGCGCT ACTCGCGTTC GCAGCAGGAC CGCACGATGA GCGAGCTGCT GCCGCGCGTG CGTGCGCTGG CGCTGCTCGC GCGCCGCTAC GACATCGGCC TGAACATCGA CGCGGAAGAG GCCGACCGTC TCGAACTGTC GCTCGACCTG CTCGAGGCGC TGTGCTTCGA TCCGGAGCTC GCGGGCTGGA ACGGCATCGG CTTCGTCGTG CAGGGCTACC AGAAGCGCTG CCCGTTCGTG ATCGACTACC TGATCGATCT CGCGCGCCGC AGCCGTCACC GCCTGATGAT CCGCCTCGTG AAGGGCGCGT ACTGGGACAG CGAGATCAAG CGGGCGCAGG TCGACGGCCT CGAAGGCTAT CCGGTCTACA CGCGCAAGAT CTACACCGAC GTGTCGTACC TCGCGTGCGC GAAGAAGCTG CTCGGAGCGC CGGACGCCGT CTACCCGCAA TTCGCGACGC ACAACGCGCA CACGCTGGCC GCGATCTATC ACCTGGCCGG CCAGAACTAC TACCCGGGCC AGTACGAATT CCAGTGCCTG CACGGGATGG GCGAGCCGCT CTACGAGGAA GTCACGGGCC GCGACAAGCT GAATCGTCCG TGCCGCGTGT ACGCACCGGT CGGCACGCAC GAGACGCTGC TCGCGTATCT CGTGCGCCGT TTGCTGGAAA ACGGCGCGAA CACGTCGTTC GTGAACCGCA TTGCGGATAA AACCGTGCCG GTGAAGGAGC TGGTCGCCGA TCCGGTCGAC GAAGCGTCGA AGGTCGTGCC GCTCGGCGCG CCGCACGCGA AGATCCCGCT GCCGCGCAAC CTGTACGGCG ACGAGCGTCC CAACTCGATG GGCCTCGACC TGTCGAACGA ACATCGTCTC GCGTCGCTGT CGTCCGCGCT GCTCGCGAGC GCGCACCACC CGTGGCGCGC GGCGCCGATG CTCGCCGACG ACGCGCTCGC CGACGCGCCG GCGCGCGACG TGCGCAACCC GGCCGACCAG CGCGACGTGG TCGGCACGGT CAGCGAAGCG ACGTCCGAGC ACGTGAGCGC GGCGCTCGCG CATGCGGTGG CCGCCGCGCC GATCTGGCAG GCGACGCCGG TCGACGCACG CGCCGATTGC CTGGTGCGCG CCGCTGACCT CCTCGAAGCG CAGATGCACA CGCTGATGGG CCTGATCGTG CGCGAAGCCG GCAAGTCGCT GCCGAACGCG ATCGCCGAAA TCCGCGAAGC GGTCGACTTC CTGCGCTATT ACGCGGCGCA GATCCGCGGC GAATTCTCGA ACGACACGCA CCGTCCGCTC GGCCCCGTGG TCTGTATCAG CCCGTGGAAC TTCCCGCTCG CGATCTTCAT GGGCCAGGTG GCCGCGGCGC TCGCCGCCGG CAACACGGTG CTCGCGAAGC CGGCCGAACA GACGCCGCTG ATCGCCGCGC AGGCCGTGCG CCTCTTGCGC GAGGCCGGCG TGCCGGCCGG CGCGGTGCAA CTGCTGCCGG GCACCGGCGA GACCGTCGGC GCGGCGCTGG TCGCCGATCC GCGCACCCGG GCGGTGATGT TCACCGGTTC GACCGAAGTC GCGCGCCTGA TCAACAAGAC GCTCGCCGCG CGCCTCGACC CGGACGGCAA GCCGATTCCG CTGATCGCCG AAACGGGCGG CCAGAACGCG ATGATCGTCG ACTCGTCGGC GCTCGCGGAG CAGGTCGTCG CGGACGTGAT GCAGTCGTCG TTCGACTCGG CCGGTCAACG GTGTTCGGCG CTGCGCGTTC TGTGTCTGCA GGACGACGTC GCGGACCGCA CGCTGACGAT GCTCAAGGGC GCGATGCACG AGCTGGCGCT CGGCAACCCG GACCGGCTGT CGACCGACGT TGGCCCGGTG ATCGACGCCG AAGCGAAGCA GACGATCGAC ACGCACGTCG CGGCGATGAA GGACAAGGGC CACGCGGTCA CGCAACTGCC GATGCCCGAC GCGTGCGCGC ACGGCACGTT CGTGCCGCCG ACGCTGATCG AGATCGGCAG CATCGACGAG CTGAAGCGTG AAGTGTTCGG CCCCGTGCTG CACGTGGTGC GCTACCGCCG CAGCCAGCTC GACAAGCTGC TCGAGCAGAT CCGCGCGACC GGCTACGGGC TGACGCTCGG CATTCACACG CGGATCGACG AGACGATCGC GCACGTGATC TCGAATGCGC ACGTGGGCAA CATCTACGTG AACCGCAACG TGATCGGCGC GGTGGTCGGC GTGCAGCCGT TCGGCGGCGA AGGGCTGTCG GGCACGGGCC CGAAGGCCGG CGGCGCGCTG TACCTGCAGC GCCTGCTCGC GACGCGTCCG TCGGGCCTGC CGCGCGCGCT CGCGCAGTCG CTGGTGGCGG ACGGCGCGAC CGAAAGCGAT GCGCGCGGCA ACCCGGCGGC GGCGCTCACG ACGCTGCGCG ACTGGCTGAT CGAGCAGCGC GAGCCGGCGC TGGCCGCGCG TTGCGACGGC TACCTCGCGC AGGTGCCGGC CGGCGCGACC GCGGTGCTGA GCGGTCCGAC GGGCGAGCGA AACACGTATA CACTCGGCCC GCGCGGCACG GTGCTGTGTG TCGCGGCGAC GCCCGGCGGC GCGCGTGCGC AGTTCGCGGC GGTGCTGGCG ACGGGCAACC GTGCGTTGTT CGCCGGCGCG GCGGGCGAGG CGCTGGTCGC CGCGCTGCCG GCGTCGCTGA AGGCGCACGC GGCCGTGCGC AAGCAGGCCG ACGCGCCGTT CGACGCGGTG CTGTTCGAAG GCGACAGCGA CGAACTGCAG ACGCTCGTGA AGGACGTCGC GCAGCGGCCG GGCCCGATCG TGTCGGTGCA GGGCGTGTCG GCGGGCGCGT TCGAGAACGG CGATGCGGAA GACTACGCGC TCGAGCGGCT GCTGACGGAA CGCTCGGTGA GCGTGAATAC GGCCGCGGCG GGCGGCAATG CGAATTTGAT GACGATCGGC TGA
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Protein sequence | MASTTLGVKV DDLLRSRLKD AAARLERTPH WLIKQAIFAY LERIEHGQLP PELSGHSGVT ELADGQATDG DDDNSPHPFL EFAQNVQPQS VLRAAITAAY RRPEPECVPF LLGQARLPAN LQADVQALAT KLVEALREKS SGGGVEGLIH EFSLSSQEGV ALMCLAEALL RIPDRATRDA LIRDKISKGD WRSHVGHAPS LFVNAATWGL MITGKLVTTN SEAGLSSALT RLIGRGGEPL IRKGVDMAMR LMGEQFVTGE TISEALANSR KYEARGFRYS YDMLGEAATT EEDAQRYYAS YEQAIHAIGK AAGGRGIYEG PGISIKLSAL HARYSRSQQD RTMSELLPRV RALALLARRY DIGLNIDAEE ADRLELSLDL LEALCFDPEL AGWNGIGFVV QGYQKRCPFV IDYLIDLARR SRHRLMIRLV KGAYWDSEIK RAQVDGLEGY PVYTRKIYTD VSYLACAKKL LGAPDAVYPQ FATHNAHTLA AIYHLAGQNY YPGQYEFQCL HGMGEPLYEE VTGRDKLNRP CRVYAPVGTH ETLLAYLVRR LLENGANTSF VNRIADKTVP VKELVADPVD EASKVVPLGA PHAKIPLPRN LYGDERPNSM GLDLSNEHRL ASLSSALLAS AHHPWRAAPM LADDALADAP ARDVRNPADQ RDVVGTVSEA TSEHVSAALA HAVAAAPIWQ ATPVDARADC LVRAADLLEA QMHTLMGLIV REAGKSLPNA IAEIREAVDF LRYYAAQIRG EFSNDTHRPL GPVVCISPWN FPLAIFMGQV AAALAAGNTV LAKPAEQTPL IAAQAVRLLR EAGVPAGAVQ LLPGTGETVG AALVADPRTR AVMFTGSTEV ARLINKTLAA RLDPDGKPIP LIAETGGQNA MIVDSSALAE QVVADVMQSS FDSAGQRCSA LRVLCLQDDV ADRTLTMLKG AMHELALGNP DRLSTDVGPV IDAEAKQTID THVAAMKDKG HAVTQLPMPD ACAHGTFVPP TLIEIGSIDE LKREVFGPVL HVVRYRRSQL DKLLEQIRAT GYGLTLGIHT RIDETIAHVI SNAHVGNIYV NRNVIGAVVG VQPFGGEGLS GTGPKAGGAL YLQRLLATRP SGLPRALAQS LVADGATESD ARGNPAAALT TLRDWLIEQR EPALAARCDG YLAQVPAGAT AVLSGPTGER NTYTLGPRGT VLCVAATPGG ARAQFAAVLA TGNRALFAGA AGEALVAALP ASLKAHAAVR KQADAPFDAV LFEGDSDELQ TLVKDVAQRP GPIVSVQGVS AGAFENGDAE DYALERLLTE RSVSVNTAAA GGNANLMTIG
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