Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0423 |
Symbol | |
ID | 8131338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 486552 |
End bp | 486842 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863701 |
Product | transcriptional regulator, CopG family |
Protein accession | YP_003016015 |
Protein GI | 253686825 |
COG category | [K] Transcription |
COG ID | [COG3905] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.416536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACA CGACACGCCA AACCACGACG CTGCGCATCG ATCAGGATAT TAAAGAACGA CTGAAAACGT TGGCCGATGA CCGCCATAGC TCAGCCCATG CGTTGATGCT GGAAGCGATT GCCGAATACG TGGAGCGTGA AGAAAAACGC AGTCAGTATC GTAAAGAGAC GCTGGTCGCG TGGGAGGAAT ACCAGAACAC CGGCGAACAC ATCACCGCAG ATGAGACCGT CACCTGCTTA GAATCCTGGG GTTCTGGGCA TGAACAGGAT GCGCCTGCAT GCCACAAATG A
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Protein sequence | MADTTRQTTT LRIDQDIKER LKTLADDRHS SAHALMLEAI AEYVEREEKR SQYRKETLVA WEEYQNTGEH ITADETVTCL ESWGSGHEQD APACHK
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