Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3294 |
Symbol | putA |
ID | 3748460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 130999 |
End bp | 134931 |
Gene Length | 3933 bp |
Protein Length | 1310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637761557 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_367540 |
Protein GI | 78064771 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.129835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA CGACTCTCGG CGTCAAAGTC GACGACCTTC TCCGCTCGCG TCTCAAGGAC GCCGCCGCGC GTCTCGAGCG CACTCCCCAC TGGCTGATCA AGCAGGCGAT CTTCGCGTAT CTCGAGCGGA TCGAGCACGG CCAGTTGCCG CCCGAGCTGT CGGGTCACAG CGGCGTGACG GAGCTCGCCG ACGGCCAGGT CGCGGACGGC GACGACGACA ACTCGCCGCA TCCGTTCCTC GAGTTCGCGC AGAACGTGCA GCCGCAATCG GTGCTGCGCG CGGCGATCAC GGCTGCGTAT CGCCGCCCCG AGCCGGAATG CGTGCCGTTC CTGCTCGGGC AGGCGCGCCT GCCCGCGAAC CTGCAGGCGG ACGTGCAGGC GCTCGCGACC AAGCTCGTCG AGGCGCTGCG CGAGAAGAGC TCGGGCGGCG GCGTCGAAGG GCTGATCCAC GAGTTCTCGC TGTCGAGCCA GGAAGGCGTC GCGCTGATGT GCCTCGCCGA AGCGCTGCTG CGCATTCCCG ATCGCGCGAC GCGCGATGCG CTGATTCGCG ACAAGATCAG CAAGGGCGAC TGGCGCTCGC ACGTCGGCCA CGCGCCGTCG CTGTTCGTGA ACGCGGCCAC GTGGGGGCTG ATGATCACCG GCAAGCTGGT GACGACCAAC AGCGAAGCCG GGCTGTCGTC GGCGCTGACG CGCCTGATCG GCCGCGGCGG CGAGCCGCTG ATCCGCAAGG GCGTCGACAT GGCGATGCGC CTGATGGGCG AGCAGTTCGT CACCGGCGAG ACGATTTCCG AAGCGCTCGC GAACAGCCGC AAGTACGAAG CGCGCGGCTT CCGCTACTCG TACGACATGC TCGGCGAAGC GGCGACCACC GAAGAGGATG CGCAGCGCTA CTACGCGTCG TACGAACAGG CGATCCACGC GATCGGCAAG GCAGCCGGCG GCCGCGGCAT CTACGAAGGC CCGGGCATCT CGATCAAGCT GTCGGCGCTG CACGCGCGCT ACTCGCGCTC GCAGCAGGAC CGCACGATGA GCGAGCTGCT GCCGCGCGTG CGCGCGCTCG CGCTGCTCGC GCGCCGCTAC GACATCGGCC TGAACATCGA TGCTGAAGAA GCCGACCGCC TCGAACTGTC GCTCGACCTG CTCGAGGCGC TGTGCTTCGA TCCGGATCTC GCGGGCTGGA ACGGCATCGG CTTTGTGGTG CAGGGCTACC AGAAGCGCTG CCCGTTCGTG ATCGACTACC TGATCGATCT CGCGCGCCGC AGCCGTCACC GCCTGATGAT CCGCCTCGTG AAGGGCGCGT ACTGGGATAC CGAGATCAAG CGTGCGCAGG TCGACGGCCT CGAAGGCTAT CCGGTCTATA CGCGCAAGAT CTACACCGAC GTGTCGTACC TCGCGTGCGC GAAGAAGCTG CTCGCGGCGC CGGACGCCGT GTACCCGCAG TTCGCGACGC ACAACGCGCA CACGCTGGCC GCGATCTACC AGCTCGCGGG CCAGAACTAC TACCCGGGCC AGTACGAATT CCAGTGCCTG CACGGGATGG GCGAGCCGCT GTACGAGGAA GTCACGGGCC GCGACAAGCT CAACCGTCCG TGCCGCGTGT ACGCGCCGGT CGGCACGCAC GAGACGCTGC TCGCGTACCT GGTGCGCCGC CTGCTCGAGA ACGGCGCGAA CACGTCGTTC GTGAACCGCA TCGCGGATAA AACCGTGGCG GTGAAGGAGC TGGTTGCCGA TCCGGTCGAC GAAGCGTCGA AGGTCGTGCC GCTCGGCGCA CCGCACGCGA AGATCCCGCT GCCGCGCAAC CTGTACGGCG ACGAGCGTCC CAACTCGATG GGTCTCGACC TGTCGAACGA ACACCGCCTC GCGTCGCTGT CGTCCGCGCT GCTCGCGAGC GCGCATTTCC CGTGGCGCGC GGCGCCGATG CTCGCCGACG ACGCGCTCGC CGACGCACCG GCCCGCGACG TGCGCAACCC GGCCGACCAG CGCGACCTGG TCGGCACGGT CAGCGAAGCG ACGGCCGAAC ACGTGAGCGC GGCACTCGCG CACGCGGTGG CCGCCGCGCC GATCTGGCAG GCGACGCCGG TCGATGCACG CGCCGATTGC CTGGTGCGCG CGGCCGACCT GCTCGAAGCG CAGATGCACA CGCTGATGGG CCTGATCGTG CGCGAAGCCG GCAAATCGCT GCCTAACGCG ATCGCCGAGA TCCGCGAAGC GGTCGACTTC CTGCGCTACT ACGCCGCACA GATCCGCGAC GAATTCTCGA ACGACACGCA CCGCCCGCTG GGCCCCGTGG TCTGTATCAG CCCGTGGAAC TTCCCGCTCG CGATCTTCAT GGGCCAGGTC GCCGCGGCAC TCGCCGCCGG CAACACGGTG CTCGCGAAGC CGGCCGAACA GACGCCGCTG ATCGCCGCGC AGGCCGTGCG CCTGCTGCGC GAGGCCGGCG TGCCGGCCGG CGCGGTGCAA CTGCTGCCGG GCACCGGCGA GACCGTCGGC GCGGCGCTGG TGGCCGACGC GCGTACGCGT GCGGTGATGT TCACCGGCTC GACCGAAGTC GCGCGCCTGA TCAACAAGAC GCTGTCCGCG CGCCTCGACC CGGACGGCAA GCCGATCCCG CTGATCGCCG AAACGGGCGG CCAGAACGCG ATGATCGTCG ACTCGTCGGC GCTCGCGGAG CAGGTCGTCG CGGACGTGAT GCAGTCGTCT TTCGACTCGG CCGGTCAACG GTGTTCGGCG CTGCGCGTTC TGTGTCTGCA GGACGATGTT GCGGACCGCA CGCTGACGAT GCTGAAGGGC GCGATGCACG AGCTGGCGCT CGGCAACCCC GACCGCCTGT CGACGGACGT CGGCCCGGTG ATCGACGGTG AAGCGAAGCA GACGATCGAC ACGCACGTCG CGGCGATGAA GGACAAGGGG CACGGCGTCA CGCAGCTGCC GGCCCCCGAG GCCTGCGCGC ACGGCACCTT CGTGCCGCCG ACGCTGATCG AGATCGGCAG CATCGACGAG CTGAAGCGCG AAGTGTTCGG CCCCGTGCTG CACGTGGTGC GTTACCGCCG CAGCCAGCTC GACAAGCTGC TGGAGCAGAT CCGCGCGACC GGCTACGGCC TGACGCTCGG CATCCACACG CGGATCGACG AGACGATCGC GCACGTGATC TCGAATGCGC ACGTCGGTAA CATCTACGTG AACCGCAACG TGATCGGCGC GGTGGTCGGC GTGCAGCCGT TCGGCGGCGA AGGGCTGTCG GGCACGGGCC CGAAGGCCGG CGGCGCGCTG TACCTGCAGC GCCTGCTCGC GACGCGTCCG TCGGGCCTGC CGCGTTCGCT CGCGCAGACG CTGATCGCGG ACGGCGCGGT GGAAGGCGAC GCGCGCGGCA ACCCGGCGGC GGCGCTCACG ACGCTGCGTG ACTGGCTGAT CGAGCAGCGC GAGCCGGTGC TGGCGGCACG TTGCGACGGC TATCTGGCCC AGGTGCCGGC CGGTGCGACC GCAGTGTTGA GCGGTCCGAC GGGCGAGCGA AACACGTATA CACTCGGCCC GCGCGGCACG GTGTTGTGTG TCGCGGCGAC GCCGGGCGGG GCGCGCGCGC AGTTCGCGGC GGTGCTGGCG ACCGGCAACC GTGCGCTGTT CGCGGGCGCG GCCGGCGAGG CGCTGGTCGC CGCGCTGCCG GCATCGTTGA AGGCACACGC GGTCGTGCGC AAGCAGGCCG ACGCGCCGTT CGACGCGGTG CTGTTCGAAG GCGACAGCGA CGAACTGCAG ACGCTCGTGA AGGACGTCGC GCAGCGGCCG GGCCCGATCG TGTCGGTGCA GGGCGTGTCG GTGGGCGCGT TCGAGAACGG CGATGCGGAA GATTACGCGC TGGAACGGCT GTTGACGGAG CGCTCGGTGA GCGTGAACAC GGCCGCGGCG GGTGGCAATG CGAATTTGAT GACGATCGGC TGA
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Protein sequence | MASTTLGVKV DDLLRSRLKD AAARLERTPH WLIKQAIFAY LERIEHGQLP PELSGHSGVT ELADGQVADG DDDNSPHPFL EFAQNVQPQS VLRAAITAAY RRPEPECVPF LLGQARLPAN LQADVQALAT KLVEALREKS SGGGVEGLIH EFSLSSQEGV ALMCLAEALL RIPDRATRDA LIRDKISKGD WRSHVGHAPS LFVNAATWGL MITGKLVTTN SEAGLSSALT RLIGRGGEPL IRKGVDMAMR LMGEQFVTGE TISEALANSR KYEARGFRYS YDMLGEAATT EEDAQRYYAS YEQAIHAIGK AAGGRGIYEG PGISIKLSAL HARYSRSQQD RTMSELLPRV RALALLARRY DIGLNIDAEE ADRLELSLDL LEALCFDPDL AGWNGIGFVV QGYQKRCPFV IDYLIDLARR SRHRLMIRLV KGAYWDTEIK RAQVDGLEGY PVYTRKIYTD VSYLACAKKL LAAPDAVYPQ FATHNAHTLA AIYQLAGQNY YPGQYEFQCL HGMGEPLYEE VTGRDKLNRP CRVYAPVGTH ETLLAYLVRR LLENGANTSF VNRIADKTVA VKELVADPVD EASKVVPLGA PHAKIPLPRN LYGDERPNSM GLDLSNEHRL ASLSSALLAS AHFPWRAAPM LADDALADAP ARDVRNPADQ RDLVGTVSEA TAEHVSAALA HAVAAAPIWQ ATPVDARADC LVRAADLLEA QMHTLMGLIV REAGKSLPNA IAEIREAVDF LRYYAAQIRD EFSNDTHRPL GPVVCISPWN FPLAIFMGQV AAALAAGNTV LAKPAEQTPL IAAQAVRLLR EAGVPAGAVQ LLPGTGETVG AALVADARTR AVMFTGSTEV ARLINKTLSA RLDPDGKPIP LIAETGGQNA MIVDSSALAE QVVADVMQSS FDSAGQRCSA LRVLCLQDDV ADRTLTMLKG AMHELALGNP DRLSTDVGPV IDGEAKQTID THVAAMKDKG HGVTQLPAPE ACAHGTFVPP TLIEIGSIDE LKREVFGPVL HVVRYRRSQL DKLLEQIRAT GYGLTLGIHT RIDETIAHVI SNAHVGNIYV NRNVIGAVVG VQPFGGEGLS GTGPKAGGAL YLQRLLATRP SGLPRSLAQT LIADGAVEGD ARGNPAAALT TLRDWLIEQR EPVLAARCDG YLAQVPAGAT AVLSGPTGER NTYTLGPRGT VLCVAATPGG ARAQFAAVLA TGNRALFAGA AGEALVAALP ASLKAHAVVR KQADAPFDAV LFEGDSDELQ TLVKDVAQRP GPIVSVQGVS VGAFENGDAE DYALERLLTE RSVSVNTAAA GGNANLMTIG
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